RNA–Protein interactions for RNA: ENST00000435216.1

CDCA4P4-201, Transcript of cell division cycle associated 4 pseudogene 4, humanhuman

BASIC

Gene CDCA4P4, Length 680 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P4-201ENST00000435216 ELOCQ15369 112 aa13.17□□□□□ -0.3
CDCA4P4-201ENST00000435216 FILIP1LQ4L180 1135 aa13.17□□□□□ -0.3
CDCA4P4-201ENST00000435216 PPP1R2P3Q6NXS1 205 aa13.17□□□□□ -0.3
CDCA4P4-201ENST00000435216 CAVIN1Q6NZI2 390 aaKnown RBP13.17□□□□□ -0.3
CDCA4P4-201ENST00000435216 GPR155Q7Z3F1 870 aa13.17□□□□□ -0.3
CDCA4P4-201ENST00000435216 SFTPA2Q8IWL1 248 aa13.17□□□□□ -0.3
CDCA4P4-201ENST00000435216 LSMEM2Q8N112 164 aa13.17□□□□□ -0.3
CDCA4P4-201ENST00000435216 PELI3Q8N2H9 469 aa13.17□□□□□ -0.3
CDCA4P4-201ENST00000435216 FSTL5Q8N475 847 aaPredicted RBP13.17□□□□□ -0.3
CDCA4P4-201ENST00000435216 KCNE4Q8WWG9 221 aa13.17□□□□□ -0.3
CDCA4P4-201ENST00000435216 SLC39A7Q92504 469 aa13.17□□□□□ -0.3
CDCA4P4-201ENST00000435216 HSPH1Q92598 858 aa13.17□□□□□ -0.3
CDCA4P4-201ENST00000435216 NAT6Q93015 286 aa13.17□□□□□ -0.3
CDCA4P4-201ENST00000435216 FUBP1Q96AE4 644 aaKnown RBP13.17□□□□□ -0.3
CDCA4P4-201ENST00000435216 CCDC74AQ96AQ1 378 aa13.17□□□□□ -0.3
CDCA4P4-201ENST00000435216 ECHDC3Q96DC8 303 aa13.17□□□□□ -0.3
CDCA4P4-201ENST00000435216 TBATAQ96M53 351 aa13.17□□□□□ -0.3
CDCA4P4-201ENST00000435216 WDR92Q96MX6 357 aa13.17□□□□□ -0.3
CDCA4P4-201ENST00000435216 BPIFA3Q9BQP9 254 aa13.17□□□□□ -0.3
CDCA4P4-201ENST00000435216 ETNK2Q9NVF9 386 aa13.17□□□□□ -0.3
CDCA4P4-201ENST00000435216 DONSONQ9NYP3 566 aa13.17□□□□□ -0.3
CDCA4P4-201ENST00000435216 AIPL1Q9NZN9 384 aa13.17□□□□□ -0.3
CDCA4P4-201ENST00000435216 GPR34Q9UPC5 381 aa13.17□□□□□ -0.3
CDCA4P4-201ENST00000435216 TMEM110-MUSTN1A8MSY1 372 aa13.16□□□□□ -0.3
CDCA4P4-201ENST00000435216 SMTNL1A8MU46 457 aa13.16□□□□□ -0.3
CDCA4P4-201ENST00000435216 EIF3CLB5ME19 914 aaKnown RBP13.16□□□□□ -0.3
CDCA4P4-201ENST00000435216 KLK10O43240 276 aa13.16□□□□□ -0.3
CDCA4P4-201ENST00000435216 ALPIP09923 528 aa13.16□□□□□ -0.3
CDCA4P4-201ENST00000435216 ELFN1P0C7U0 828 aa13.16□□□□□ -0.3
CDCA4P4-201ENST00000435216 GZMAP12544 262 aa13.16□□□□□ -0.3
CDCA4P4-201ENST00000435216 GM2AP17900 193 aa13.16□□□□□ -0.3
CDCA4P4-201ENST00000435216 AMPD1P23109 780 aa13.16□□□□□ -0.3
CDCA4P4-201ENST00000435216 PRKCIP41743 596 aa13.16□□□□□ -0.3
CDCA4P4-201ENST00000435216 CSNK1DP48730 415 aa13.16□□□□□ -0.3
CDCA4P4-201ENST00000435216 ZNF165P49910 485 aa13.16□□□□□ -0.3
CDCA4P4-201ENST00000435216 ERVPABLB-1P60509 514 aa13.16□□□□□ -0.3
CDCA4P4-201ENST00000435216 MTM1Q13496 603 aa13.16□□□□□ -0.3
CDCA4P4-201ENST00000435216 SPIDRQ14159 915 aa13.16□□□□□ -0.3
CDCA4P4-201ENST00000435216 LBRQ14739 615 aaKnown RBP13.16□□□□□ -0.3
CDCA4P4-201ENST00000435216 AGERQ15109 404 aa13.16□□□□□ -0.3
CDCA4P4-201ENST00000435216 TXNRD3NBQ6F5E7 133 aa13.16□□□□□ -0.3
CDCA4P4-201ENST00000435216 LIPIQ6XZB0 460 aa13.16□□□□□ -0.3
CDCA4P4-201ENST00000435216 B3GNT8Q7Z7M8 397 aa13.16□□□□□ -0.3
CDCA4P4-201ENST00000435216 ARL10Q8N8L6 244 aa13.16□□□□□ -0.3
CDCA4P4-201ENST00000435216 TPCN2Q8NHX9 752 aa13.16□□□□□ -0.3
CDCA4P4-201ENST00000435216 FNIP1Q8TF40 1166 aa13.16□□□□□ -0.3
CDCA4P4-201ENST00000435216 PDCD6IPQ8WUM4 868 aaKnown RBP13.16□□□□□ -0.3
CDCA4P4-201ENST00000435216 SCG3Q8WXD2 468 aaKnown RBP13.16□□□□□ -0.3
CDCA4P4-201ENST00000435216 OR1E3Q8WZA6 343 aa13.16□□□□□ -0.3
CDCA4P4-201ENST00000435216 PRR11Q96HE9 360 aaPredicted RBP13.16□□□□□ -0.3
CDCA4P4-201ENST00000435216 BTBD6Q96KE9 485 aa13.16□□□□□ -0.3
CDCA4P4-201ENST00000435216 EIF3CQ99613 913 aaKnown RBP13.16□□□□□ -0.3
CDCA4P4-201ENST00000435216 LGR4Q9BXB1 951 aa13.16□□□□□ -0.3
CDCA4P4-201ENST00000435216 ZWILCHQ9H900 591 aa13.16□□□□□ -0.3
CDCA4P4-201ENST00000435216 FGF22Q9HCT0 170 aa13.16□□□□□ -0.3
CDCA4P4-201ENST00000435216 THSD1Q9NS62 852 aa13.16□□□□□ -0.3
CDCA4P4-201ENST00000435216 PCDHGC4Q9Y5F7 938 aa13.16□□□□□ -0.3
CDCA4P4-201ENST00000435216 SCINQ9Y6U3 715 aa13.16□□□□□ -0.3
CDCA4P4-201ENST00000435216 A0A1B0GTH6 734 aa13.15□□□□□ -0.3
CDCA4P4-201ENST00000435216 A0A1W2PQC6 194 aa13.15□□□□□ -0.3
CDCA4P4-201ENST00000435216 TRAFD1O14545 582 aaPredicted RBP13.15□□□□□ -0.3
CDCA4P4-201ENST00000435216 ATXN7O15265 892 aaPredicted RBP13.15□□□□□ -0.3
CDCA4P4-201ENST00000435216 TCEA3O75764 348 aa13.15□□□□□ -0.3
CDCA4P4-201ENST00000435216 C1QL1O75973 258 aa13.15□□□□□ -0.3
CDCA4P4-201ENST00000435216 TNFP01375 233 aa13.15□□□□□ -0.3
CDCA4P4-201ENST00000435216 RBMS1P29558 406 aaKnown RBP13.15□□□□□ -0.3
CDCA4P4-201ENST00000435216 CCL7P80098 99 aa13.15□□□□□ -0.3
CDCA4P4-201ENST00000435216 ACOX1Q15067 660 aa13.15□□□□□ -0.3
CDCA4P4-201ENST00000435216 PTPRRQ15256 657 aa13.15□□□□□ -0.3
CDCA4P4-201ENST00000435216 ARHGAP40Q5TG30 622 aa13.15□□□□□ -0.3
CDCA4P4-201ENST00000435216 TMCO4Q5TGY1 634 aa13.15□□□□□ -0.3
CDCA4P4-201ENST00000435216 DENND2CQ68D51 928 aa13.15□□□□□ -0.3
CDCA4P4-201ENST00000435216 DPPA4Q7L190 304 aa13.15□□□□□ -0.3
CDCA4P4-201ENST00000435216 GKN2Q86XP6 184 aa13.15□□□□□ -0.3
CDCA4P4-201ENST00000435216 SDR16C5Q8N3Y7 309 aa13.15□□□□□ -0.3
CDCA4P4-201ENST00000435216 PGBD5Q8N414 524 aa13.15□□□□□ -0.3
CDCA4P4-201ENST00000435216 SLC46A1Q96NT5 459 aa13.15□□□□□ -0.3
CDCA4P4-201ENST00000435216 PSKH2Q96QS6 385 aa13.15□□□□□ -0.3
CDCA4P4-201ENST00000435216 FOXP3Q9BZS1 431 aa13.15□□□□□ -0.3
CDCA4P4-201ENST00000435216 SUDS3Q9H7L9 328 aaPredicted RBP13.15□□□□□ -0.3
CDCA4P4-201ENST00000435216 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.15□□□□□ -0.3
CDCA4P4-201ENST00000435216 WDR70Q9NW82 654 aa13.15□□□□□ -0.3
CDCA4P4-201ENST00000435216 B4GALT6Q9UBX8 382 aa13.15□□□□□ -0.3
CDCA4P4-201ENST00000435216 SEPT3Q9UH03 358 aa13.15□□□□□ -0.3
CDCA4P4-201ENST00000435216 MOSPD1Q9UJG1 213 aa13.15□□□□□ -0.3
CDCA4P4-201ENST00000435216 ATMQ13315 3056 aa13.15□□□□□ -0.3
CDCA4P4-201ENST00000435216 TEX51A0A1B0GUA7 166 aa13.14□□□□□ -0.31
CDCA4P4-201ENST00000435216 A0A1W2PQM1 296 aa13.14□□□□□ -0.31
CDCA4P4-201ENST00000435216 H3BRJ5 948 aa13.14□□□□□ -0.31
CDCA4P4-201ENST00000435216 CACNB4O00305 520 aaPredicted RBP13.14□□□□□ -0.31
CDCA4P4-201ENST00000435216 NTN3O00634 580 aaPredicted RBP13.14□□□□□ -0.31
CDCA4P4-201ENST00000435216 TNFSF15O95150 251 aa13.14□□□□□ -0.31
CDCA4P4-201ENST00000435216 SERPINC1P01008 464 aa13.14□□□□□ -0.31
CDCA4P4-201ENST00000435216 RPLP0P05388 317 aaKnown RBP13.14□□□□□ -0.31
CDCA4P4-201ENST00000435216 RARAP10276 462 aa13.14□□□□□ -0.31
CDCA4P4-201ENST00000435216 ARL4AP40617 200 aa13.14□□□□□ -0.31
CDCA4P4-201ENST00000435216 HCAR3P49019 387 aa13.14□□□□□ -0.31
CDCA4P4-201ENST00000435216 TMPRSS3P57727 454 aa13.14□□□□□ -0.31
CDCA4P4-201ENST00000435216 MAXP61244 160 aa13.14□□□□□ -0.31
CDCA4P4-201ENST00000435216 AP1S1P61966 158 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms