RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 SMG8Q8ND04 991 aaKnown RBP7.49□□□□□ -1.21
CPSF6-202ENST00000435070 ARNTL2Q8WYA1 636 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 TMEM246Q9BRR3 403 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 ZNF341Q9BYN7 854 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 ADAMTS10Q9H324 1103 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 TOR3AQ9H497 397 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 TOGARAM1Q9Y4F4 1720 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 KCNK1O00180 336 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 DLX3O60479 287 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 NBNO60934 754 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 KCNA2P16389 499 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 CYP2F1P24903 491 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 LEPRP48357 1165 aaKnown RBP7.49□□□□□ -1.21
CPSF6-202ENST00000435070 ACAP2Q15057 778 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 TJAP1Q5JTD0 557 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 ANKRD34AQ69YU3 496 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 GTF2IRD2BQ6EKJ0 949 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 GTF2IRD2Q86UP8 949 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 ABI1Q8IZP0 508 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 FSTL5Q8N475 847 aaPredicted RBP7.49□□□□□ -1.21
CPSF6-202ENST00000435070 KDM1BQ8NB78 822 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 PHF21BQ96EK2 531 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 SNRNP25Q9BV90 132 aaKnown RBP7.49□□□□□ -1.21
CPSF6-202ENST00000435070 IL37Q9NZH6 218 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 USP22Q9UPT9 525 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 GOLGA8CPA6NN73 597 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 SYCE1LA8MT33 242 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 ALOX12P18054 663 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 GPD1P21695 349 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 GRM3Q14832 879 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 ZNF699Q32M78 642 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 CLEC6AQ6EIG7 209 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 SWSAP1Q6NVH7 229 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 CNSTQ6PJW8 725 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 RETREG3Q86VR2 466 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 SLC22A15Q8IZD6 547 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 CELF2-AS1Q8N7Q2 184 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 DTX3Q8N9I9 347 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 STMN3Q9NZ72 180 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 SPEF1Q9Y4P9 236 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 ACOX3O15254 700 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 KCNK2O95069 426 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 GSNP06396 782 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 ABCB1P08183 1280 aaPredicted RBP7.49□□□□□ -1.21
CPSF6-202ENST00000435070 HSPA1AP0DMV8 641 aaKnown RBP7.49□□□□□ -1.21
CPSF6-202ENST00000435070 HSPA1BP0DMV9 641 aaKnown RBP7.49□□□□□ -1.21
CPSF6-202ENST00000435070 PLIN5Q00G26 463 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 HERC3Q15034 1050 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 SLC27A3Q5K4L6 730 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 INTS11Q5TA45 600 aaKnown RBP7.49□□□□□ -1.21
CPSF6-202ENST00000435070 TTC23LQ6PF05 361 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 BRINP3Q76B58 766 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 DPP9Q86TI2 863 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 TLK2Q86UE8 772 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 CADM2Q8N3J6 435 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 REXO4Q9GZR2 422 aaKnown RBP7.49□□□□□ -1.21
CPSF6-202ENST00000435070 NIF3L1Q9GZT8 377 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 LRRC40Q9H9A6 602 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 GPN2Q9H9Y4 310 aaPredicted RBP7.49□□□□□ -1.21
CPSF6-202ENST00000435070 AGPAT4Q9NRZ5 378 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 UBP1Q9NZI7 540 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 MRPL11Q9Y3B7 192 aaKnown RBP7.49□□□□□ -1.21
CPSF6-202ENST00000435070 ABCB7O75027 752 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 LDLRP01130 860 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 BDNFP23560 247 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 PSMB9P28065 219 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 AXLP30530 894 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 MPP1Q00013 466 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 BNIPLQ7Z465 357 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 LINC00523Q86TU6 105 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 CDKL3Q8IVW4 592 aaPredicted RBP7.49□□□□□ -1.21
CPSF6-202ENST00000435070 SULF1Q8IWU6 871 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 PNPLA1Q8N8W4 532 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 ASCC1Q8N9N2 400 aaKnown RBP7.49□□□□□ -1.21
CPSF6-202ENST00000435070 RPL3LQ92901 407 aaKnown RBP7.49□□□□□ -1.21
CPSF6-202ENST00000435070 PPP1R16BQ96T49 567 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 RBBP8Q99708 897 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 TTYH2Q9BSA4 534 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 C6orf62Q9GZU0 229 aaPredicted RBP7.49□□□□□ -1.21
CPSF6-202ENST00000435070 ZNF385DQ9H6B1 395 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 TNFRSF12AQ9NP84 129 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 CD300AQ9UGN4 299 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 HMGXB4Q9UGU5 601 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 AKT3Q9Y243 479 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 DYRK3O43781 588 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 HUS1O60921 280 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 PGAM1P18669 254 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 TGM2P21980 687 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 CD40LGP29965 261 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 CASP3P42574 277 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 C1QTNF8P60827 252 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 TRAP1Q12931 704 aaKnown RBP7.48□□□□□ -1.21
CPSF6-202ENST00000435070 ATP6AP1Q15904 470 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 ZCCHC8Q6NZY4 707 aaKnown RBP7.48□□□□□ -1.21
CPSF6-202ENST00000435070 PID1Q7Z2X4 250 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 FAM83FQ8NEG4 500 aaPredicted RBP7.48□□□□□ -1.21
CPSF6-202ENST00000435070 VPS39Q96JC1 886 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 UHRF1Q96T88 793 aaPredicted RBP7.48□□□□□ -1.21
CPSF6-202ENST00000435070 AGO4Q9HCK5 861 aaKnown RBP7.48□□□□□ -1.21
CPSF6-202ENST00000435070 CD320Q9NPF0 282 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms