RNA–Protein interactions for RNA: ENST00000434728.1

CDC42EP1-204, Transcript of CDC42 effector protein 1, humanhuman

TSL 4

Gene CDC42EP1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-204ENST00000434728 HDAC4P56524 1084 aa13.5□□□□□ -0.25
CDC42EP1-204ENST00000434728 YBEYP58557 167 aaPredicted RBP13.5□□□□□ -0.25
CDC42EP1-204ENST00000434728 POLR2FP61218 127 aaKnown RBP13.5□□□□□ -0.25
CDC42EP1-204ENST00000434728 UGP2Q16851 508 aa13.5□□□□□ -0.25
CDC42EP1-204ENST00000434728 DPCR1Q3MIW9 517 aa13.5□□□□□ -0.25
CDC42EP1-204ENST00000434728 MAP9Q49MG5 647 aa13.5□□□□□ -0.25
CDC42EP1-204ENST00000434728 FKBP15Q5T1M5 1219 aa13.5□□□□□ -0.25
CDC42EP1-204ENST00000434728 PHF19Q5T6S3 580 aa13.5□□□□□ -0.25
CDC42EP1-204ENST00000434728 BRAT1Q6PJG6 821 aa13.5□□□□□ -0.25
CDC42EP1-204ENST00000434728 PYROXD2Q8N2H3 581 aa13.5□□□□□ -0.25
CDC42EP1-204ENST00000434728 FAM46DQ8NEK8 389 aa13.5□□□□□ -0.25
CDC42EP1-204ENST00000434728 NTAN1Q96AB6 310 aa13.5□□□□□ -0.25
CDC42EP1-204ENST00000434728 CMKLR1Q99788 373 aa13.5□□□□□ -0.25
CDC42EP1-204ENST00000434728 MAGEB5Q9BZ81 275 aa13.5□□□□□ -0.25
CDC42EP1-204ENST00000434728 DPEP2Q9H4A9 486 aa13.5□□□□□ -0.25
CDC42EP1-204ENST00000434728 SUV39H2Q9H5I1 410 aa13.5□□□□□ -0.25
CDC42EP1-204ENST00000434728 NLRC4Q9NPP4 1024 aa13.5□□□□□ -0.25
CDC42EP1-204ENST00000434728 FAM207AQ9NSI2 230 aaPredicted RBP13.5□□□□□ -0.25
CDC42EP1-204ENST00000434728 TAB2Q9NYJ8 693 aa13.5□□□□□ -0.25
CDC42EP1-204ENST00000434728 DONSONQ9NYP3 566 aa13.5□□□□□ -0.25
CDC42EP1-204ENST00000434728 NOCTQ9UK39 431 aaKnown RBP13.5□□□□□ -0.25
CDC42EP1-204ENST00000434728 NEU3Q9UQ49 428 aa13.5□□□□□ -0.25
CDC42EP1-204ENST00000434728 SSUH2Q9Y2M2 353 aa13.5□□□□□ -0.25
CDC42EP1-204ENST00000434728 LRP4O75096 1905 aa13.49□□□□□ -0.25
CDC42EP1-204ENST00000434728 INSIG1O15503 277 aa13.49□□□□□ -0.25
CDC42EP1-204ENST00000434728 FGF10O15520 208 aaPredicted RBP13.49□□□□□ -0.25
CDC42EP1-204ENST00000434728 CYP1A1P04798 512 aaPredicted RBP13.49□□□□□ -0.25
CDC42EP1-204ENST00000434728 ELFN1P0C7U0 828 aa13.49□□□□□ -0.25
CDC42EP1-204ENST00000434728 EEF1GP26641 437 aaKnown RBP13.49□□□□□ -0.25
CDC42EP1-204ENST00000434728 SERPINA4P29622 427 aa13.49□□□□□ -0.25
CDC42EP1-204ENST00000434728 CCKBRP32239 447 aa13.49□□□□□ -0.25
CDC42EP1-204ENST00000434728 RFC1P35251 1148 aaPredicted RBP13.49□□□□□ -0.25
CDC42EP1-204ENST00000434728 SOX5P35711 763 aa13.49□□□□□ -0.25
CDC42EP1-204ENST00000434728 ZNF75DP51815 510 aa13.49□□□□□ -0.25
CDC42EP1-204ENST00000434728 TPI1P60174 286 aa13.49□□□□□ -0.25
CDC42EP1-204ENST00000434728 FMO1Q01740 532 aa13.49□□□□□ -0.25
CDC42EP1-204ENST00000434728 MTM1Q13496 603 aa13.49□□□□□ -0.25
CDC42EP1-204ENST00000434728 SERINC3Q13530 473 aa13.49□□□□□ -0.25
CDC42EP1-204ENST00000434728 TGIF1Q15583 401 aa13.49□□□□□ -0.25
CDC42EP1-204ENST00000434728 TCP11X2Q5H9J9 407 aa13.49□□□□□ -0.25
CDC42EP1-204ENST00000434728 TMEM164Q5U3C3 297 aa13.49□□□□□ -0.25
CDC42EP1-204ENST00000434728 DNAJC24Q6P3W2 148 aa13.49□□□□□ -0.25
CDC42EP1-204ENST00000434728 OR56A4Q8NGH8 313 aa13.49□□□□□ -0.25
CDC42EP1-204ENST00000434728 HCAR2Q8TDS4 363 aa13.49□□□□□ -0.25
CDC42EP1-204ENST00000434728 EXTL1Q92935 676 aa13.49□□□□□ -0.25
CDC42EP1-204ENST00000434728 TMEM159Q96B96 161 aa13.49□□□□□ -0.25
CDC42EP1-204ENST00000434728 PDXPQ96GD0 296 aa13.49□□□□□ -0.25
CDC42EP1-204ENST00000434728 ZNF641Q96N77 438 aaPredicted RBP13.49□□□□□ -0.25
CDC42EP1-204ENST00000434728 TRIM4Q9C037 500 aa13.49□□□□□ -0.25
CDC42EP1-204ENST00000434728 KLC2Q9H0B6 622 aa13.49□□□□□ -0.25
CDC42EP1-204ENST00000434728 ATP13A3Q9H7F0 1226 aa13.49□□□□□ -0.25
CDC42EP1-204ENST00000434728 SUDS3Q9H7L9 328 aaPredicted RBP13.49□□□□□ -0.25
CDC42EP1-204ENST00000434728 SAMSN1Q9NSI8 373 aaKnown RBP13.49□□□□□ -0.25
CDC42EP1-204ENST00000434728 LHX3Q9UBR4 397 aa13.49□□□□□ -0.25
CDC42EP1-204ENST00000434728 ATP8A1Q9Y2Q0 1164 aa13.49□□□□□ -0.25
CDC42EP1-204ENST00000434728 TLN1Q9Y490 2541 aaKnown RBP13.49□□□□□ -0.25
CDC42EP1-204ENST00000434728 A0A1W2PQM1 296 aa13.48□□□□□ -0.25
CDC42EP1-204ENST00000434728 NVLO15381 856 aaKnown RBP13.48□□□□□ -0.25
CDC42EP1-204ENST00000434728 ARHGAP6O43182 974 aa13.48□□□□□ -0.25
CDC42EP1-204ENST00000434728 ZW10O43264 779 aa13.48□□□□□ -0.25
CDC42EP1-204ENST00000434728 EFSO43281 561 aa13.48□□□□□ -0.25
CDC42EP1-204ENST00000434728 PRKCGP05129 697 aa13.48□□□□□ -0.25
CDC42EP1-204ENST00000434728 GLB1P16278 677 aa13.48□□□□□ -0.25
CDC42EP1-204ENST00000434728 ITIH1P19827 911 aa13.48□□□□□ -0.25
CDC42EP1-204ENST00000434728 MMP12P39900 470 aa13.48□□□□□ -0.25
CDC42EP1-204ENST00000434728 STAT1P42224 750 aa13.48□□□□□ -0.25
CDC42EP1-204ENST00000434728 DPY19L2P1Q6NXN4 242 aa13.48□□□□□ -0.25
CDC42EP1-204ENST00000434728 DCUN1D2Q6PH85 259 aa13.48□□□□□ -0.25
CDC42EP1-204ENST00000434728 WDR59Q6PJI9 974 aa13.48□□□□□ -0.25
CDC42EP1-204ENST00000434728 XKR5Q6UX68 686 aa13.48□□□□□ -0.25
CDC42EP1-204ENST00000434728 C3orf20Q8ND61 904 aa13.48□□□□□ -0.25
CDC42EP1-204ENST00000434728 KIAA1524Q8TCG1 905 aa13.48□□□□□ -0.25
CDC42EP1-204ENST00000434728 CENPIQ92674 756 aaPredicted RBP13.48□□□□□ -0.25
CDC42EP1-204ENST00000434728 MCEEQ96PE7 176 aa13.48□□□□□ -0.25
CDC42EP1-204ENST00000434728 TUBGCP5Q96RT8 1024 aa13.48□□□□□ -0.25
CDC42EP1-204ENST00000434728 RBM15Q96T37 977 aaKnown RBP eCLIP13.48□□□□□ -0.253e-7■■■■□ 24.5
CDC42EP1-204ENST00000434728 ZMYND15Q9H091 742 aa13.48□□□□□ -0.25
CDC42EP1-204ENST00000434728 VPS16Q9H269 839 aa13.48□□□□□ -0.25
CDC42EP1-204ENST00000434728 LRIT1Q9P2V4 623 aa13.48□□□□□ -0.25
CDC42EP1-204ENST00000434728 PRAMEF33A0A0G2JMD5 474 aa13.47□□□□□ -0.25
CDC42EP1-204ENST00000434728 ARHGAP42A6NI28 874 aa13.47□□□□□ -0.25
CDC42EP1-204ENST00000434728 DAPK3O43293 454 aa13.47□□□□□ -0.25
CDC42EP1-204ENST00000434728 CCP110O43303 1012 aa13.47□□□□□ -0.25
CDC42EP1-204ENST00000434728 PRAMEF10O60809 474 aa13.47□□□□□ -0.25
CDC42EP1-204ENST00000434728 PALMO75781 387 aa13.47□□□□□ -0.25
CDC42EP1-204ENST00000434728 ITGB2P05107 769 aa13.47□□□□□ -0.25
CDC42EP1-204ENST00000434728 SFTPCP11686 197 aa13.47□□□□□ -0.25
CDC42EP1-204ENST00000434728 PPM1FP49593 454 aaPredicted RBP13.47□□□□□ -0.25
CDC42EP1-204ENST00000434728 CSRP3P50461 194 aa13.47□□□□□ -0.25
CDC42EP1-204ENST00000434728 AIF1P55008 147 aa13.47□□□□□ -0.25
CDC42EP1-204ENST00000434728 BCL2L1Q07817 233 aa13.47□□□□□ -0.25
CDC42EP1-204ENST00000434728 CYTH1Q15438 398 aa13.47□□□□□ -0.25
CDC42EP1-204ENST00000434728 C14orf28Q4W4Y0 310 aa13.47□□□□□ -0.25
CDC42EP1-204ENST00000434728 CERCAMQ5T4B2 595 aa13.47□□□□□ -0.25
CDC42EP1-204ENST00000434728 VASH2Q86V25 355 aa13.47□□□□□ -0.25
CDC42EP1-204ENST00000434728 CAMK1DQ8IU85 385 aa13.47□□□□□ -0.25
CDC42EP1-204ENST00000434728 UMODL1-AS1Q8N2C9 162 aa13.47□□□□□ -0.25
CDC42EP1-204ENST00000434728 CINPQ9BW66 212 aaPredicted RBP13.47□□□□□ -0.25
CDC42EP1-204ENST00000434728 TRIM5Q9C035 493 aa13.47□□□□□ -0.25
CDC42EP1-204ENST00000434728 GANQ9H2C0 597 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms