RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 CSNK1G1Q9HCP0 422 aa15.65■□□□□ 0.1
SCARF1-203ENST00000434376 TRIM17Q9Y577 477 aa15.65■□□□□ 0.1
SCARF1-203ENST00000434376 TNFRSF10BO14763 440 aa15.65■□□□□ 0.1
SCARF1-203ENST00000434376 TGDSO95455 350 aa15.65■□□□□ 0.1
SCARF1-203ENST00000434376 VCLP18206 1134 aa15.65■□□□□ 0.1
SCARF1-203ENST00000434376 CNTFP26441 200 aa15.65■□□□□ 0.1
SCARF1-203ENST00000434376 FAM83EQ2M2I3 478 aa15.65■□□□□ 0.1
SCARF1-203ENST00000434376 CMPK2Q5EBM0 449 aa15.65■□□□□ 0.1
SCARF1-203ENST00000434376 FUT10Q6P4F1 479 aa15.65■□□□□ 0.1
SCARF1-203ENST00000434376 CARNMT1Q8N4J0 409 aa15.65■□□□□ 0.1
SCARF1-203ENST00000434376 WBP2Q969T9 261 aa15.65■□□□□ 0.1
SCARF1-203ENST00000434376 RPL10LQ96L21 214 aaKnown RBP15.65■□□□□ 0.1
SCARF1-203ENST00000434376 CAPNS2Q96L46 248 aa15.65■□□□□ 0.1
SCARF1-203ENST00000434376 CCDC106Q9BWC9 280 aa15.65■□□□□ 0.1
SCARF1-203ENST00000434376 CDH19Q9H159 772 aa15.65■□□□□ 0.1
SCARF1-203ENST00000434376 MMADHCQ9H3L0 296 aaPredicted RBP15.65■□□□□ 0.1
SCARF1-203ENST00000434376 RGS18Q9NS28 235 aa15.65■□□□□ 0.1
SCARF1-203ENST00000434376 ZFP37Q9Y6Q3 630 aaPredicted RBP15.65■□□□□ 0.1
SCARF1-203ENST00000434376 FAM155AB1AL88 458 aaPredicted RBP15.65■□□□□ 0.1
SCARF1-203ENST00000434376 NBNO60934 754 aa15.65■□□□□ 0.1
SCARF1-203ENST00000434376 ZNF623O75123 536 aa15.65■□□□□ 0.1
SCARF1-203ENST00000434376 KCNC1P48547 511 aa15.65■□□□□ 0.1
SCARF1-203ENST00000434376 ALDH7A1P49419 539 aaKnown RBP15.65■□□□□ 0.1
SCARF1-203ENST00000434376 SGSHP51688 502 aa15.65■□□□□ 0.1
SCARF1-203ENST00000434376 KLF10Q13118 480 aa15.65■□□□□ 0.1
SCARF1-203ENST00000434376 SIRPB2Q5JXA9 342 aa15.65■□□□□ 0.1
SCARF1-203ENST00000434376 LRRC8DQ7L1W4 858 aa15.65■□□□□ 0.1
SCARF1-203ENST00000434376 TMEM165Q9HC07 324 aa15.65■□□□□ 0.1
SCARF1-203ENST00000434376 S100A14Q9HCY8 104 aa15.65■□□□□ 0.1
SCARF1-203ENST00000434376 COX4I1P13073 169 aa15.64■□□□□ 0.09
SCARF1-203ENST00000434376 CCNCP24863 283 aa15.64■□□□□ 0.09
SCARF1-203ENST00000434376 HADHAP40939 763 aa15.64■□□□□ 0.09
SCARF1-203ENST00000434376 RENBPP51606 427 aa15.64■□□□□ 0.09
SCARF1-203ENST00000434376 SCAPQ12770 1279 aa15.64■□□□□ 0.09
SCARF1-203ENST00000434376 NFE2Q16621 373 aaPredicted RBP15.64■□□□□ 0.09
SCARF1-203ENST00000434376 KIF19Q2TAC6 998 aa15.64■□□□□ 0.09
SCARF1-203ENST00000434376 COLGALT2Q8IYK4 626 aa15.64■□□□□ 0.09
SCARF1-203ENST00000434376 RAB3IL1Q8TBN0 382 aa15.64■□□□□ 0.09
SCARF1-203ENST00000434376 NSUN5Q96P11 429 aaKnown RBP15.64■□□□□ 0.09
SCARF1-203ENST00000434376 SMOC2Q9H3U7 446 aa15.64■□□□□ 0.09
SCARF1-203ENST00000434376 EIF2B3Q9NR50 452 aaKnown RBP15.64■□□□□ 0.09
SCARF1-203ENST00000434376 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.64■□□□□ 0.09
SCARF1-203ENST00000434376 TIMM22Q9Y584 194 aa15.64■□□□□ 0.09
SCARF1-203ENST00000434376 NUP214P35658 2090 aaPredicted RBP15.64■□□□□ 0.09
SCARF1-203ENST00000434376 BIRC5O15392 142 aa15.64■□□□□ 0.09
SCARF1-203ENST00000434376 PEX1O43933 1283 aa15.64■□□□□ 0.09
SCARF1-203ENST00000434376 KPNA6O60684 536 aa15.64■□□□□ 0.09
SCARF1-203ENST00000434376 CRCPO75575 148 aa15.64■□□□□ 0.09
SCARF1-203ENST00000434376 PAMP19021 973 aa15.64■□□□□ 0.09
SCARF1-203ENST00000434376 GRK2P25098 689 aa15.64■□□□□ 0.09
SCARF1-203ENST00000434376 GRIA2P42262 883 aa15.64■□□□□ 0.09
SCARF1-203ENST00000434376 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.64■□□□□ 0.09
SCARF1-203ENST00000434376 ARCQ7LC44 396 aa15.64■□□□□ 0.09
SCARF1-203ENST00000434376 PGBD5Q8N414 524 aa15.64■□□□□ 0.09
SCARF1-203ENST00000434376 SMG9Q9H0W8 520 aaKnown RBP15.64■□□□□ 0.09
SCARF1-203ENST00000434376 SEMA4BQ9NPR2 832 aaPredicted RBP15.64■□□□□ 0.09
SCARF1-203ENST00000434376 MTMR11A4FU01 709 aa15.63■□□□□ 0.09
SCARF1-203ENST00000434376 MAGEC1O60732 1142 aa15.63■□□□□ 0.09
SCARF1-203ENST00000434376 CDKN2DP55273 166 aa15.63■□□□□ 0.09
SCARF1-203ENST00000434376 ZRANB3Q5FWF4 1079 aa15.63■□□□□ 0.09
SCARF1-203ENST00000434376 ATXN7L2Q5T6C5 722 aaPredicted RBP15.63■□□□□ 0.09
SCARF1-203ENST00000434376 BCL7CQ8WUZ0 217 aaPredicted RBP15.63■□□□□ 0.09
SCARF1-203ENST00000434376 SEMA6AQ9H2E6 1030 aa15.63■□□□□ 0.09
SCARF1-203ENST00000434376 ATP13A1Q9HD20 1204 aa15.63■□□□□ 0.09
SCARF1-203ENST00000434376 Q9Y3F1 56 aa15.63■□□□□ 0.09
SCARF1-203ENST00000434376 C2orf78A6NCI8 922 aa15.63■□□□□ 0.09
SCARF1-203ENST00000434376 F5H5T6 163 aa15.63■□□□□ 0.09
SCARF1-203ENST00000434376 PRRG1O14668 218 aa15.63■□□□□ 0.09
SCARF1-203ENST00000434376 WEE1P30291 646 aa15.63■□□□□ 0.09
SCARF1-203ENST00000434376 RPL14P50914 215 aaKnown RBP15.63■□□□□ 0.09
SCARF1-203ENST00000434376 TCTN1Q2MV58 587 aa15.63■□□□□ 0.09
SCARF1-203ENST00000434376 POM121L1PQ3SYA9 428 aa15.63■□□□□ 0.09
SCARF1-203ENST00000434376 AGKQ53H12 422 aa15.63■□□□□ 0.09
SCARF1-203ENST00000434376 ARMC12Q5T9G4 340 aa15.63■□□□□ 0.09
SCARF1-203ENST00000434376 MRPL10Q7Z7H8 261 aaKnown RBP15.63■□□□□ 0.09
SCARF1-203ENST00000434376 ATP6V0D2Q8N8Y2 350 aa15.63■□□□□ 0.09
SCARF1-203ENST00000434376 OR4K2Q8NGD2 314 aa15.63■□□□□ 0.09
SCARF1-203ENST00000434376 PRPF18Q99633 342 aaKnown RBP15.63■□□□□ 0.09
SCARF1-203ENST00000434376 TLR8Q9NR97 1041 aaKnown RBP15.63■□□□□ 0.09
SCARF1-203ENST00000434376 CAPN14A8MX76 684 aa15.63■□□□□ 0.09
SCARF1-203ENST00000434376 M0QZQ0 153 aa15.63■□□□□ 0.09
SCARF1-203ENST00000434376 RAP1GDS1P52306 607 aa15.63■□□□□ 0.09
SCARF1-203ENST00000434376 INHBCP55103 352 aa15.63■□□□□ 0.09
SCARF1-203ENST00000434376 CREB5Q02930 508 aa15.63■□□□□ 0.09
SCARF1-203ENST00000434376 FOLH1Q04609 750 aa15.63■□□□□ 0.09
SCARF1-203ENST00000434376 COL9A2Q14055 689 aaPredicted RBP15.63■□□□□ 0.09
SCARF1-203ENST00000434376 DSC3Q14574 896 aa15.63■□□□□ 0.09
SCARF1-203ENST00000434376 ACAD11Q709F0 780 aa15.63■□□□□ 0.09
SCARF1-203ENST00000434376 TRIM74Q86UV6 250 aa15.63■□□□□ 0.09
SCARF1-203ENST00000434376 TRIM73Q86UV7 250 aa15.63■□□□□ 0.09
SCARF1-203ENST00000434376 HMX1Q9NP08 348 aaPredicted RBP15.63■□□□□ 0.09
SCARF1-203ENST00000434376 DTNAQ9Y4J8 743 aa15.63■□□□□ 0.09
SCARF1-203ENST00000434376 C15orf38-AP3S2A0A0A6YYH1 394 aa15.62■□□□□ 0.09
SCARF1-203ENST00000434376 UBXN8O00124 270 aa15.62■□□□□ 0.09
SCARF1-203ENST00000434376 DNAJA2O60884 412 aa15.62■□□□□ 0.09
SCARF1-203ENST00000434376 CLPTM1O96005 669 aa15.62■□□□□ 0.09
SCARF1-203ENST00000434376 PIK3R1P27986 724 aa15.62■□□□□ 0.09
SCARF1-203ENST00000434376 PIK3CGP48736 1102 aa15.62■□□□□ 0.09
SCARF1-203ENST00000434376 CCDC153Q494R4 210 aa15.62■□□□□ 0.09
SCARF1-203ENST00000434376 ARPINQ7Z6K5 226 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms