RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 POMCP01189 267 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 CHMP24386 653 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 CALML3P27482 149 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 PDIA3P30101 505 aaKnown RBP5.39□□□□□ -1.55
PTPN4-203ENST00000430976 PTDSS1P48651 473 aaKnown RBP5.39□□□□□ -1.55
PTPN4-203ENST00000430976 TGM4P49221 684 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 RIDAP52758 137 aaKnown RBP5.39□□□□□ -1.55
PTPN4-203ENST00000430976 PSMD4P55036 377 aaKnown RBP5.39□□□□□ -1.55
PTPN4-203ENST00000430976 RTP1P59025 263 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 SRP54P61011 504 aaKnown RBP5.39□□□□□ -1.55
PTPN4-203ENST00000430976 MAP3K10Q02779 954 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 SREBF2Q12772 1141 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 KIAA0319Q5VV43 1072 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 ATG9BQ674R7 924 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 TMEM26Q6ZUK4 368 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 DENND5BQ6ZUT9 1274 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 YTHDF3Q7Z739 585 aaKnown RBP5.39□□□□□ -1.55
PTPN4-203ENST00000430976 SLCO6A1Q86UG4 719 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 AGBL3Q8NEM8 1001 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 FBXW5Q969U6 566 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 TESCQ96BS2 214 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 ELP4Q96EB1 424 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 ZFRQ96KR1 1074 aaKnown RBP5.39□□□□□ -1.55
PTPN4-203ENST00000430976 NEDD4LQ96PU5 975 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 VAT1Q99536 393 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 CTRCQ99895 268 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 DCUN1D5Q9BTE7 237 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 NLNQ9BYT8 704 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 CCDC134Q9H6E4 229 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 IFT46Q9NQC8 304 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 PNPLA3Q9NST1 481 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 NUDT15Q9NV35 164 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 NKIRAS1Q9NYS0 192 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 TAS2R3Q9NYW6 316 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 TNFRSF10DQ9UBN6 386 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 GAB2Q9UQC2 676 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 CHKBQ9Y259 395 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 DTNAQ9Y4J8 743 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 PCDHGA9Q9Y5G4 932 aaKnown RBP5.39□□□□□ -1.55
PTPN4-203ENST00000430976 SAR1BQ9Y6B6 198 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 TOPBP1Q92547 1522 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 IFT140Q96RY7 1462 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 FBLL1A6NHQ2 334 aaKnown RBP5.39□□□□□ -1.55
PTPN4-203ENST00000430976 TMEM210A6NLX4 147 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 H0YIN7 160 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 SH3BGRLO75368 114 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 PDE9AO76083 593 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 ABLIM3O94929 683 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 TJP3O95049 919 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 DLGAP3O95886 979 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 MT-ATP6P00846 226 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 FAM153BP0C7A2 387 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 COX5BP10606 129 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 PRPS2P11908 318 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 IFNAR1P17181 557 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 PTPN1P18031 435 aaKnown RBP5.39□□□□□ -1.55
PTPN4-203ENST00000430976 UGT1A6P19224 532 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 ITIH1P19827 911 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 GLRA2P23416 452 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 TBXAS1P24557 533 aaPredicted RBP5.39□□□□□ -1.55
PTPN4-203ENST00000430976 GNA15P30679 374 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 HOXA11P31270 313 aaPredicted RBP5.39□□□□□ -1.55
PTPN4-203ENST00000430976 SYKP43405 635 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 MAPK12P53778 367 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 SLFN5Q08AF3 891 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 CDC20Q12834 499 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 TAF1AQ15573 450 aaPredicted RBP5.39□□□□□ -1.55
PTPN4-203ENST00000430976 DDR2Q16832 855 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 KHDRBS2Q5VWX1 349 aaKnown RBP5.39□□□□□ -1.55
PTPN4-203ENST00000430976 RBM44Q6ZP01 1051 aaKnown RBP5.39□□□□□ -1.55
PTPN4-203ENST00000430976 GK5Q6ZS86 529 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 FUNDC1Q8IVP5 155 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 ZZZ3Q8IYH5 903 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 FAM109AQ8N4B1 249 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 OR4D10Q8NGI6 311 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 OR8J1Q8NGP2 316 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 DNAJB3Q8WWF6 145 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 TMCO6Q96DC7 493 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 FBXO17Q96EF6 278 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 RBBP8Q99708 897 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 ISCA1Q9BUE6 129 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 C12orf65Q9H3J6 166 aaKnown RBP5.39□□□□□ -1.55
PTPN4-203ENST00000430976 METTL7AQ9H8H3 244 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 SNX15Q9NRS6 342 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 ZNF282Q9UDV7 671 aaPredicted RBP5.39□□□□□ -1.55
PTPN4-203ENST00000430976 PCDHB10Q9UN67 800 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 RUVBL2Q9Y230 463 aaKnown RBP5.39□□□□□ -1.55
PTPN4-203ENST00000430976 DYRK1BQ9Y463 629 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.39□□□□□ -1.55
PTPN4-203ENST00000430976 GRIN2DO15399 1336 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 A0A087WV62 115 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 A0A1B0GW15 77 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 XKRY2A2RUG3 117 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 PI4KAP2A4QPH2 592 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 KLF4O43474 513 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 ATG13O75143 517 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 RBMXL2O75526 392 aaKnown RBP5.38□□□□□ -1.55
PTPN4-203ENST00000430976 BAG3O95817 575 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 HMGCRP04035 888 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 TMEM191BP0C7N4 346 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 159.2 ms