RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 PNCKQ6P2M8 343 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 KCNT2Q6UVM3 1135 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 SPRED1Q7Z699 444 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 CDH24Q86UP0 819 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 MAPKAPK5Q8IW41 473 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 BBS7Q8IWZ6 715 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 FAM9CQ8IZT9 166 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 PIAS4Q8N2W9 510 aaPredicted RBP8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 CELF2-AS1Q8N7Q2 184 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 C2orf69Q8N8R5 385 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 CYGBQ8WWM9 190 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 PPWD1Q96BP3 646 aaKnown RBP8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 LRRC39Q96DD0 335 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 GJD4Q96KN9 370 aaPredicted RBP8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 CPVLQ9H3G5 476 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 GHITMQ9H3K2 345 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 MCCC2Q9HCC0 563 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 GPRC5BQ9NZH0 403 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 NRCAMQ92823 1304 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 MYH9P35579 1960 aaKnown RBP8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 TCRBV9S1A1TA0A576 114 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 TCP10L2B9ZVM9 353 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 LINC01387J3KSC0 135 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 BTN3A1O00481 513 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 MUSKO15146 869 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 PSTPIP1O43586 416 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 TOM1L1O75674 476 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 RASAL1O95294 804 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 SNAP29O95721 258 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 NR3C1P04150 777 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 KRT18P05783 430 aaKnown RBP8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 FGF3P11487 239 aaPredicted RBP8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 DDCP20711 480 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 FMO4P31512 558 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 GABRB2P47870 512 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 NOVP48745 357 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 NT5C2P49902 561 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 SEPHS1P49903 392 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 ZNF45Q02386 682 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 UBE3AQ05086 875 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 CBLBQ13191 982 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 ART3Q13508 389 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 ALCAMQ13740 583 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 BMT2Q1RMZ1 405 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 Q3ZCU0 254 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 MSS51Q4VC12 460 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 C4orf46Q504U0 113 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 FASTKD1Q53R41 847 aaKnown RBP8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 ZNF484Q5JVG2 852 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 HYIQ5T013 277 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 VWA5B1Q5TIE3 1220 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 ATF7IP2Q5U623 682 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 PLA2G4FQ68DD2 849 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 BRAT1Q6PJG6 821 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 ZCCHC23Q6ZST2 131 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 UTS2BQ765I0 119 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 CHST15Q7LFX5 561 aaPredicted RBP8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 PODNQ7Z5L7 613 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 KIF18BQ86Y91 864 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 RHPN2Q8IUC4 686 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 KATNAL2Q8IYT4 538 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 PDIK1LQ8N165 341 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 CNTD1Q8N815 330 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 ATAD1Q8NBU5 361 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 OR8K3Q8NH51 312 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 MCOLN3Q8TDD5 553 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 BLOC1S5Q8TDH9 187 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 STON2Q8WXE9 905 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 USP13Q92995 863 aaPredicted RBP8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 FBXW5Q969U6 566 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 DMRTB1Q96MA1 342 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 WDR83Q9BRX9 315 aaKnown RBP8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 INTS2Q9H0H0 1204 aaKnown RBP8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 BARHL2Q9NY43 387 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 CCDC59Q9P031 241 aaKnown RBP8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 POLLQ9UGP5 575 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 CHORDC1Q9UHD1 332 aaPredicted RBP8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 TLR6Q9Y2C9 796 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 KRT87PA6NCN2 255 aa8.9□□□□□ -0.98
CDC42BPA-206ENST00000429440 ZBBXA8MT70 800 aa8.9□□□□□ -0.98
CDC42BPA-206ENST00000429440 KPNA5O15131 536 aa8.9□□□□□ -0.98
CDC42BPA-206ENST00000429440 CAPN5O15484 640 aaPredicted RBP8.9□□□□□ -0.98
CDC42BPA-206ENST00000429440 BANF1O75531 89 aa8.9□□□□□ -0.98
CDC42BPA-206ENST00000429440 PIAS1O75925 651 aa8.9□□□□□ -0.98
CDC42BPA-206ENST00000429440 VAPBO95292 243 aa8.9□□□□□ -0.98
CDC42BPA-206ENST00000429440 SNAPINO95295 136 aa8.9□□□□□ -0.98
CDC42BPA-206ENST00000429440 WDPCPO95876 746 aa8.9□□□□□ -0.98
CDC42BPA-206ENST00000429440 GSRP00390 522 aa8.9□□□□□ -0.98
CDC42BPA-206ENST00000429440 ALBP02768 609 aa8.9□□□□□ -0.98
CDC42BPA-206ENST00000429440 ZSCAN5DPP0CG00 497 aa8.9□□□□□ -0.98
CDC42BPA-206ENST00000429440 SLC2A3P11169 496 aa8.9□□□□□ -0.98
CDC42BPA-206ENST00000429440 ENO3P13929 434 aaPredicted RBP8.9□□□□□ -0.98
CDC42BPA-206ENST00000429440 ZNF30P17039 623 aa8.9□□□□□ -0.98
CDC42BPA-206ENST00000429440 ITGALP20701 1170 aa8.9□□□□□ -0.98
CDC42BPA-206ENST00000429440 MAPK4P31152 587 aa8.9□□□□□ -0.98
CDC42BPA-206ENST00000429440 HMGCLP35914 325 aa8.9□□□□□ -0.98
CDC42BPA-206ENST00000429440 VBP1P61758 197 aa8.9□□□□□ -0.98
CDC42BPA-206ENST00000429440 CD83Q01151 205 aa8.9□□□□□ -0.98
CDC42BPA-206ENST00000429440 TEKQ02763 1124 aa8.9□□□□□ -0.98
CDC42BPA-206ENST00000429440 TNK1Q13470 666 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms