RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 PLK1P53350 603 aa8.97□□□□□ -0.97
CTNND1-208ENST00000428599 TCHHL1Q5QJ38 904 aaPredicted RBP8.97□□□□□ -0.97
CTNND1-208ENST00000428599 TRIM40Q6P9F5 258 aa8.97□□□□□ -0.97
CTNND1-208ENST00000428599 TXNDC11Q6PKC3 985 aa8.97□□□□□ -0.97
CTNND1-208ENST00000428599 SLC35C1Q96A29 364 aa8.97□□□□□ -0.97
CTNND1-208ENST00000428599 TIFAQ96CG3 184 aa8.97□□□□□ -0.97
CTNND1-208ENST00000428599 HES2Q9Y543 173 aa8.97□□□□□ -0.97
CTNND1-208ENST00000428599 AFDNP55196 1824 aaKnown RBP8.97□□□□□ -0.97
CTNND1-208ENST00000428599 XKRYO14609 159 aa8.97□□□□□ -0.97
CTNND1-208ENST00000428599 LIN7AO14910 233 aaPredicted RBP8.97□□□□□ -0.97
CTNND1-208ENST00000428599 ATP5F1P24539 256 aaPredicted RBP8.97□□□□□ -0.97
CTNND1-208ENST00000428599 CDH5P33151 784 aaPredicted RBP8.97□□□□□ -0.97
CTNND1-208ENST00000428599 TAS2R41P59536 307 aa8.97□□□□□ -0.97
CTNND1-208ENST00000428599 RPP38P78345 283 aaKnown RBP8.97□□□□□ -0.97
CTNND1-208ENST00000428599 FAM110CQ1W6H9 321 aa8.97□□□□□ -0.97
CTNND1-208ENST00000428599 ATAT1Q5SQI0 421 aa8.97□□□□□ -0.97
CTNND1-208ENST00000428599 DCLRE1AQ6PJP8 1040 aa8.97□□□□□ -0.97
CTNND1-208ENST00000428599 CYP2R1Q6VVX0 501 aa8.97□□□□□ -0.97
CTNND1-208ENST00000428599 HCAR2Q8TDS4 363 aa8.97□□□□□ -0.97
CTNND1-208ENST00000428599 ZNF483Q8TF39 744 aaPredicted RBP8.97□□□□□ -0.97
CTNND1-208ENST00000428599 TRNT1Q96Q11 434 aaKnown RBP8.97□□□□□ -0.97
CTNND1-208ENST00000428599 IMP3Q9NV31 184 aaKnown RBP8.97□□□□□ -0.97
CTNND1-208ENST00000428599 DNAJC11Q9NVH1 559 aa8.97□□□□□ -0.97
CTNND1-208ENST00000428599 ARHGAP20Q9P2F6 1191 aa8.97□□□□□ -0.97
CTNND1-208ENST00000428599 MRPL42Q9Y6G3 142 aaKnown RBP8.97□□□□□ -0.97
CTNND1-208ENST00000428599 CAPN6Q9Y6Q1 641 aa8.97□□□□□ -0.97
CTNND1-208ENST00000428599 ROBO1Q9Y6N7 1651 aa8.97□□□□□ -0.97
CTNND1-208ENST00000428599 ITGB5P18084 799 aa8.97□□□□□ -0.97
CTNND1-208ENST00000428599 RAB25P57735 213 aa8.97□□□□□ -0.97
CTNND1-208ENST00000428599 RRP1BQ14684 758 aaKnown RBP8.97□□□□□ -0.97
CTNND1-208ENST00000428599 CRTC3Q6UUV7 619 aa8.97□□□□□ -0.97
CTNND1-208ENST00000428599 APTXQ7Z2E3 356 aaKnown RBP8.97□□□□□ -0.97
CTNND1-208ENST00000428599 KBTBD7Q8WVZ9 684 aa8.97□□□□□ -0.97
CTNND1-208ENST00000428599 RIT1Q92963 219 aa8.97□□□□□ -0.97
CTNND1-208ENST00000428599 ZFRQ96KR1 1074 aaKnown RBP8.97□□□□□ -0.97
CTNND1-208ENST00000428599 DUSP9Q99956 384 aaKnown RBP8.97□□□□□ -0.97
CTNND1-208ENST00000428599 MCCC2Q9HCC0 563 aa8.97□□□□□ -0.97
CTNND1-208ENST00000428599 IKZF3Q9UKT9 509 aa8.97□□□□□ -0.97
CTNND1-208ENST00000428599 NAALADL1Q9UQQ1 740 aa8.97□□□□□ -0.97
CTNND1-208ENST00000428599 ERGIC3Q9Y282 383 aa8.97□□□□□ -0.97
CTNND1-208ENST00000428599 MRPS7Q9Y2R9 242 aaKnown RBP8.97□□□□□ -0.97
CTNND1-208ENST00000428599 COLEC10Q9Y6Z7 277 aa8.97□□□□□ -0.97
CTNND1-208ENST00000428599 NALCNQ8IZF0 1738 aa8.97□□□□□ -0.97
CTNND1-208ENST00000428599 ASTN2O75129 1339 aaPredicted RBP8.97□□□□□ -0.97
CTNND1-208ENST00000428599 H3BM21 787 aa8.97□□□□□ -0.97
CTNND1-208ENST00000428599 APOC4-APOC2K7ER74 178 aa8.97□□□□□ -0.97
CTNND1-208ENST00000428599 CHP2O43745 196 aa8.97□□□□□ -0.97
CTNND1-208ENST00000428599 SLC28A2O43868 658 aa8.97□□□□□ -0.97
CTNND1-208ENST00000428599 TMCC2O75069 709 aa8.97□□□□□ -0.97
CTNND1-208ENST00000428599 OTCP00480 354 aa8.97□□□□□ -0.97
CTNND1-208ENST00000428599 APOC2P02655 101 aa8.97□□□□□ -0.97
CTNND1-208ENST00000428599 CHRNGP07510 517 aa8.97□□□□□ -0.97
CTNND1-208ENST00000428599 ELNP15502 786 aa8.97□□□□□ -0.97
CTNND1-208ENST00000428599 MIPP30301 263 aa8.97□□□□□ -0.97
CTNND1-208ENST00000428599 SMAD3P84022 425 aaKnown RBP8.97□□□□□ -0.97
CTNND1-208ENST00000428599 GALNT3Q14435 633 aa8.97□□□□□ -0.97
CTNND1-208ENST00000428599 ATXN7L2Q5T6C5 722 aaPredicted RBP8.97□□□□□ -0.97
CTNND1-208ENST00000428599 SNX20Q7Z614 316 aa8.97□□□□□ -0.97
CTNND1-208ENST00000428599 SNX32Q86XE0 403 aa8.97□□□□□ -0.97
CTNND1-208ENST00000428599 ZDHHC4Q9NPG8 344 aa8.97□□□□□ -0.97
CTNND1-208ENST00000428599 TBC1D14Q9P2M4 693 aa8.97□□□□□ -0.97
CTNND1-208ENST00000428599 RHPN2P1A8MT19 583 aa8.97□□□□□ -0.97
CTNND1-208ENST00000428599 NEDD8-MDP1E9PL57 170 aa8.97□□□□□ -0.97
CTNND1-208ENST00000428599 KMOO15229 486 aa8.97□□□□□ -0.97
CTNND1-208ENST00000428599 OR10H3O60404 316 aa8.97□□□□□ -0.97
CTNND1-208ENST00000428599 TNFAIP8O95379 198 aa8.97□□□□□ -0.97
CTNND1-208ENST00000428599 NFATC1O95644 943 aa8.97□□□□□ -0.97
CTNND1-208ENST00000428599 ATP13A5Q4VNC0 1218 aa8.97□□□□□ -0.97
CTNND1-208ENST00000428599 ADAMTSL2Q86TH1 951 aa8.97□□□□□ -0.97
CTNND1-208ENST00000428599 DEFB118Q96PH6 123 aa8.97□□□□□ -0.97
CTNND1-208ENST00000428599 GRIP2Q9C0E4 1043 aa8.97□□□□□ -0.97
CTNND1-208ENST00000428599 RGPD8O14715 1765 aaPredicted RBP8.97□□□□□ -0.97
CTNND1-208ENST00000428599 OR5F1O95221 314 aa8.96□□□□□ -0.97
CTNND1-208ENST00000428599 SERPINA1P01009 418 aa8.96□□□□□ -0.97
CTNND1-208ENST00000428599 FGBP02675 491 aa8.96□□□□□ -0.97
CTNND1-208ENST00000428599 ALAS2P22557 587 aa8.96□□□□□ -0.97
CTNND1-208ENST00000428599 CASP5P51878 434 aa8.96□□□□□ -0.97
CTNND1-208ENST00000428599 PUDPQ08623 228 aa8.96□□□□□ -0.97
CTNND1-208ENST00000428599 MAPK11Q15759 364 aa8.96□□□□□ -0.97
CTNND1-208ENST00000428599 PPP1R15BQ5SWA1 713 aa8.96□□□□□ -0.97
CTNND1-208ENST00000428599 NT5DC1Q5TFE4 455 aa8.96□□□□□ -0.97
CTNND1-208ENST00000428599 PSRC1Q6PGN9 363 aaPredicted RBP8.96□□□□□ -0.97
CTNND1-208ENST00000428599 RAVER1Q8IY67 606 aaKnown RBP8.96□□□□□ -0.97
CTNND1-208ENST00000428599 PTGR2Q8N8N7 351 aaPredicted RBP8.96□□□□□ -0.97
CTNND1-208ENST00000428599 PHC3Q8NDX5 983 aa8.96□□□□□ -0.97
CTNND1-208ENST00000428599 OR5T3Q8NGG3 340 aa8.96□□□□□ -0.97
CTNND1-208ENST00000428599 OR4A15Q8NGL6 344 aa8.96□□□□□ -0.97
CTNND1-208ENST00000428599 MAGEE2Q8TD90 523 aaPredicted RBP8.96□□□□□ -0.97
CTNND1-208ENST00000428599 POP5Q969H6 163 aaKnown RBP8.96□□□□□ -0.97
CTNND1-208ENST00000428599 BHLHE41Q9C0J9 482 aaPredicted RBP8.96□□□□□ -0.97
CTNND1-208ENST00000428599 RXFP1Q9HBX9 757 aa8.96□□□□□ -0.97
CTNND1-208ENST00000428599 FANCFQ9NPI8 374 aa8.96□□□□□ -0.97
CTNND1-208ENST00000428599 MTRRQ9UBK8 725 aa8.96□□□□□ -0.97
CTNND1-208ENST00000428599 LEF1Q9UJU2 399 aaPredicted RBP8.96□□□□□ -0.97
CTNND1-208ENST00000428599 MGAT4AQ9UM21 535 aa8.96□□□□□ -0.97
CTNND1-208ENST00000428599 AKAP12Q02952 1782 aa8.96□□□□□ -0.97
CTNND1-208ENST00000428599 IRGMA1A4Y4 181 aa8.96□□□□□ -0.97
CTNND1-208ENST00000428599 OR6C75A6NL08 312 aa8.96□□□□□ -0.97
CTNND1-208ENST00000428599 SCGNO76038 276 aa8.96□□□□□ -0.97
CTNND1-208ENST00000428599 MATN4O95460 622 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms