RNA–Protein interactions for RNA: ENST00000428552.1

CSTF1-203, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 3

Gene CSTF1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-203ENST00000428552 TAF8Q7Z7C8 310 aa8.1□□□□□ -1.11
CSTF1-203ENST00000428552 ZSWIM9Q86XI8 627 aa8.1□□□□□ -1.11
CSTF1-203ENST00000428552 TRIM59Q8IWR1 403 aa8.1□□□□□ -1.11
CSTF1-203ENST00000428552 UNC5BQ8IZJ1 945 aa8.1□□□□□ -1.11
CSTF1-203ENST00000428552 RYBPQ8N488 228 aaPredicted RBP8.1□□□□□ -1.11
CSTF1-203ENST00000428552 APOBEC4Q8WW27 367 aaKnown RBP8.1□□□□□ -1.11
CSTF1-203ENST00000428552 HAPLN3Q96S86 360 aa8.1□□□□□ -1.11
CSTF1-203ENST00000428552 TSG101Q99816 390 aa8.1□□□□□ -1.11
CSTF1-203ENST00000428552 LGR4Q9BXB1 951 aa8.1□□□□□ -1.11
CSTF1-203ENST00000428552 C1QTNF7Q9BXJ2 289 aa8.1□□□□□ -1.11
CSTF1-203ENST00000428552 SCAND2PQ9GZW5 306 aaPredicted RBP8.1□□□□□ -1.11
CSTF1-203ENST00000428552 KLC2Q9H0B6 622 aa8.1□□□□□ -1.11
CSTF1-203ENST00000428552 NOL6Q9H6R4 1146 aaKnown RBP8.1□□□□□ -1.11
CSTF1-203ENST00000428552 UBE2TQ9NPD8 197 aaPredicted RBP8.1□□□□□ -1.11
CSTF1-203ENST00000428552 PPARGC1AQ9UBK2 798 aaKnown RBP8.1□□□□□ -1.11
CSTF1-203ENST00000428552 AJAP1Q9UKB5 411 aaPredicted RBP8.1□□□□□ -1.11
CSTF1-203ENST00000428552 ZDHHC9Q9Y397 364 aa8.1□□□□□ -1.11
CSTF1-203ENST00000428552 MFHAS1Q9Y4C4 1052 aa8.1□□□□□ -1.11
CSTF1-203ENST00000428552 ZNF106Q9H2Y7 1883 aaKnown RBP8.09□□□□□ -1.11
CSTF1-203ENST00000428552 FAM72CH0Y354 149 aa8.09□□□□□ -1.11
CSTF1-203ENST00000428552 TMCC1O94876 653 aa8.09□□□□□ -1.11
CSTF1-203ENST00000428552 PIGNO95427 931 aa8.09□□□□□ -1.11
CSTF1-203ENST00000428552 PRKCGP05129 697 aa8.09□□□□□ -1.11
CSTF1-203ENST00000428552 PCCBP05166 539 aa8.09□□□□□ -1.11
CSTF1-203ENST00000428552 THRAP10827 490 aa8.09□□□□□ -1.11
CSTF1-203ENST00000428552 F8A1P23610 371 aa8.09□□□□□ -1.11
CSTF1-203ENST00000428552 MPSTP25325 297 aa8.09□□□□□ -1.11
CSTF1-203ENST00000428552 COL8A1P27658 744 aa8.09□□□□□ -1.11
CSTF1-203ENST00000428552 HTR1BP28222 390 aa8.09□□□□□ -1.11
CSTF1-203ENST00000428552 ALDH4A1P30038 563 aa8.09□□□□□ -1.11
CSTF1-203ENST00000428552 MMP12P39900 470 aa8.09□□□□□ -1.11
CSTF1-203ENST00000428552 LIG3P49916 1009 aa8.09□□□□□ -1.11
CSTF1-203ENST00000428552 SNRPD1P62314 119 aaKnown RBP8.09□□□□□ -1.11
CSTF1-203ENST00000428552 DEUP1Q05D60 604 aa8.09□□□□□ -1.11
CSTF1-203ENST00000428552 MTM1Q13496 603 aa8.09□□□□□ -1.11
CSTF1-203ENST00000428552 SQSTM1Q13501 440 aa8.09□□□□□ -1.11
CSTF1-203ENST00000428552 CLPPQ16740 277 aaPredicted RBP8.09□□□□□ -1.11
CSTF1-203ENST00000428552 DEFB109BQ30KR1 87 aa8.09□□□□□ -1.11
CSTF1-203ENST00000428552 SLC25A52Q3SY17 297 aa8.09□□□□□ -1.11
CSTF1-203ENST00000428552 FAM72AQ5TYM5 149 aa8.09□□□□□ -1.11
CSTF1-203ENST00000428552 NKAIN2Q5VXU1 208 aa8.09□□□□□ -1.11
CSTF1-203ENST00000428552 ANKS6Q68DC2 871 aa8.09□□□□□ -1.11
CSTF1-203ENST00000428552 FAM72DQ6L9T8 149 aa8.09□□□□□ -1.11
CSTF1-203ENST00000428552 TTI2Q6NXR4 508 aa8.09□□□□□ -1.11
CSTF1-203ENST00000428552 ATCAYQ86WG3 371 aa8.09□□□□□ -1.11
CSTF1-203ENST00000428552 FAM72BQ86X60 149 aa8.09□□□□□ -1.11
CSTF1-203ENST00000428552 TICAM1Q8IUC6 712 aa8.09□□□□□ -1.11
CSTF1-203ENST00000428552 OR56A4Q8NGH8 313 aa8.09□□□□□ -1.11
CSTF1-203ENST00000428552 SSC4DQ8WTU2 575 aa8.09□□□□□ -1.11
CSTF1-203ENST00000428552 PTCD2Q8WV60 388 aaKnown RBP8.09□□□□□ -1.11
CSTF1-203ENST00000428552 PATE1Q8WXA2 126 aa8.09□□□□□ -1.11
CSTF1-203ENST00000428552 SHC3Q92529 594 aa8.09□□□□□ -1.11
CSTF1-203ENST00000428552 RTP4Q96DX8 246 aa8.09□□□□□ -1.11
CSTF1-203ENST00000428552 CEP63Q96MT8 703 aa8.09□□□□□ -1.11
CSTF1-203ENST00000428552 TTYH3Q9C0H2 523 aa8.09□□□□□ -1.11
CSTF1-203ENST00000428552 DPEP2Q9H4A9 486 aa8.09□□□□□ -1.11
CSTF1-203ENST00000428552 PRM3Q9NNZ6 103 aa8.09□□□□□ -1.11
CSTF1-203ENST00000428552 PCDH12Q9NPG4 1184 aa8.09□□□□□ -1.11
CSTF1-203ENST00000428552 PLCB1Q9NQ66 1216 aa8.09□□□□□ -1.11
CSTF1-203ENST00000428552 RRN3Q9NYV6 651 aa8.09□□□□□ -1.11
CSTF1-203ENST00000428552 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.09□□□□□ -1.11
CSTF1-203ENST00000428552 PDP2Q9P2J9 529 aa8.09□□□□□ -1.11
CSTF1-203ENST00000428552 LHX3Q9UBR4 397 aa8.09□□□□□ -1.11
CSTF1-203ENST00000428552 KCNMB2Q9Y691 235 aa8.09□□□□□ -1.11
CSTF1-203ENST00000428552 ARHGEF17Q96PE2 2063 aaPredicted RBP8.09□□□□□ -1.11
CSTF1-203ENST00000428552 IGHV1OR21-1A0A087WYE8 117 aa8.08□□□□□ -1.12
CSTF1-203ENST00000428552 A1L4Q6 167 aa8.08□□□□□ -1.12
CSTF1-203ENST00000428552 B4E171 279 aa8.08□□□□□ -1.12
CSTF1-203ENST00000428552 TNFRSF10CO14798 259 aa8.08□□□□□ -1.12
CSTF1-203ENST00000428552 PPM1DO15297 605 aa8.08□□□□□ -1.12
CSTF1-203ENST00000428552 CAPN5O15484 640 aaPredicted RBP8.08□□□□□ -1.12
CSTF1-203ENST00000428552 BUB1BO60566 1050 aaPredicted RBP8.08□□□□□ -1.12
CSTF1-203ENST00000428552 AGFG2O95081 481 aa8.08□□□□□ -1.12
CSTF1-203ENST00000428552 ECEL1O95672 775 aa8.08□□□□□ -1.12
CSTF1-203ENST00000428552 CLDN1O95832 211 aa8.08□□□□□ -1.12
CSTF1-203ENST00000428552 F9P00740 461 aa8.08□□□□□ -1.12
CSTF1-203ENST00000428552 HOXC4P09017 264 aaPredicted RBP8.08□□□□□ -1.12
CSTF1-203ENST00000428552 FURINP09958 794 aa8.08□□□□□ -1.12
CSTF1-203ENST00000428552 VAMP1P23763 118 aa8.08□□□□□ -1.12
CSTF1-203ENST00000428552 TRIM23P36406 574 aa8.08□□□□□ -1.12
CSTF1-203ENST00000428552 DCTP40126 519 aa8.08□□□□□ -1.12
CSTF1-203ENST00000428552 TSPAN7P41732 249 aa8.08□□□□□ -1.12
CSTF1-203ENST00000428552 GABRB2P47870 512 aa8.08□□□□□ -1.12
CSTF1-203ENST00000428552 RNASE9P60153 205 aaKnown RBP8.08□□□□□ -1.12
CSTF1-203ENST00000428552 NRG1Q02297 640 aaPredicted RBP8.08□□□□□ -1.12
CSTF1-203ENST00000428552 RALGDSQ12967 914 aa8.08□□□□□ -1.12
CSTF1-203ENST00000428552 TRA2AQ13595 282 aaKnown RBP eCLIP8.08□□□□□ -1.12
CSTF1-203ENST00000428552 POLD3Q15054 466 aaPredicted RBP8.08□□□□□ -1.12
CSTF1-203ENST00000428552 UGP2Q16851 508 aa8.08□□□□□ -1.12
CSTF1-203ENST00000428552 CCDC40Q4G0X9 1142 aa8.08□□□□□ -1.12
CSTF1-203ENST00000428552 CRTC2Q53ET0 693 aaPredicted RBP8.08□□□□□ -1.12
CSTF1-203ENST00000428552 ACBD5Q5T8D3 534 aaPredicted RBP8.08□□□□□ -1.12
CSTF1-203ENST00000428552 TCTN3Q6NUS6 607 aa8.08□□□□□ -1.12
CSTF1-203ENST00000428552 DNAJC14Q6Y2X3 702 aaPredicted RBP8.08□□□□□ -1.12
CSTF1-203ENST00000428552 FAM131BQ86XD5 332 aa8.08□□□□□ -1.12
CSTF1-203ENST00000428552 GALNT11Q8NCW6 608 aa8.08□□□□□ -1.12
CSTF1-203ENST00000428552 AGBL5Q8NDL9 886 aa8.08□□□□□ -1.12
CSTF1-203ENST00000428552 OR4D9Q8NGE8 314 aa8.08□□□□□ -1.12
CSTF1-203ENST00000428552 STARD8Q92502 1023 aa8.08□□□□□ -1.12
CSTF1-203ENST00000428552 HMCESQ96FZ2 354 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms