RNA–Protein interactions for RNA: ENST00000428361.5

CTDSP1-202, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-202ENST00000428361 CWC15Q9P013 229 aaKnown RBP15.56■□□□□ 0.08
CTDSP1-202ENST00000428361 RCOR3Q9P2K3 495 aaPredicted RBP15.56■□□□□ 0.08
CTDSP1-202ENST00000428361 LCMT1Q9UIC8 334 aa15.56■□□□□ 0.08
CTDSP1-202ENST00000428361 PADI4Q9UM07 663 aa15.56■□□□□ 0.08
CTDSP1-202ENST00000428361 MUSKO15146 869 aa15.55■□□□□ 0.08
CTDSP1-202ENST00000428361 YY2O15391 372 aa15.55■□□□□ 0.08
CTDSP1-202ENST00000428361 BUB1BO60566 1050 aaPredicted RBP15.55■□□□□ 0.08
CTDSP1-202ENST00000428361 PCCBP05166 539 aa15.55■□□□□ 0.08
CTDSP1-202ENST00000428361 HOXC4P09017 264 aaPredicted RBP15.55■□□□□ 0.08
CTDSP1-202ENST00000428361 ITIH2P19823 946 aa15.55■□□□□ 0.08
CTDSP1-202ENST00000428361 RBMS1P29558 406 aaKnown RBP15.55■□□□□ 0.08
CTDSP1-202ENST00000428361 CDH6P55285 790 aa15.55■□□□□ 0.08
CTDSP1-202ENST00000428361 UBASH3AP57075 661 aa15.55■□□□□ 0.08
CTDSP1-202ENST00000428361 KIAA1024LP59773 190 aa15.55■□□□□ 0.08
CTDSP1-202ENST00000428361 SRP54P61011 504 aaKnown RBP15.55■□□□□ 0.08
CTDSP1-202ENST00000428361 C1orf61Q13536 156 aa15.55■□□□□ 0.08
CTDSP1-202ENST00000428361 SPIDRQ14159 915 aa15.55■□□□□ 0.08
CTDSP1-202ENST00000428361 IQCB1Q15051 598 aa15.55■□□□□ 0.08
CTDSP1-202ENST00000428361 HADHQ16836 314 aaKnown RBP15.55■□□□□ 0.08
CTDSP1-202ENST00000428361 TSR1Q2NL82 804 aaKnown RBP15.55■□□□□ 0.08
CTDSP1-202ENST00000428361 DPPA4Q7L190 304 aa15.55■□□□□ 0.08
CTDSP1-202ENST00000428361 SLC35F3Q8IY50 421 aa15.55■□□□□ 0.08
CTDSP1-202ENST00000428361 ATPAF2Q8N5M1 289 aa15.55■□□□□ 0.08
CTDSP1-202ENST00000428361 NPWQ8N729 165 aa15.55■□□□□ 0.08
CTDSP1-202ENST00000428361 HSPH1Q92598 858 aa15.55■□□□□ 0.08
CTDSP1-202ENST00000428361 NAP1L5Q96NT1 182 aaPredicted RBP15.55■□□□□ 0.08
CTDSP1-202ENST00000428361 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.55■□□□□ 0.08
CTDSP1-202ENST00000428361 COQ6Q9Y2Z9 468 aa15.55■□□□□ 0.08
CTDSP1-202ENST00000428361 PCDHB1Q9Y5F3 818 aa15.55■□□□□ 0.08
CTDSP1-202ENST00000428361 DGKBQ9Y6T7 804 aa15.55■□□□□ 0.08
CTDSP1-202ENST00000428361 LAMA5O15230 3695 aa15.55■□□□□ 0.08
CTDSP1-202ENST00000428361 CELSR3Q9NYQ7 3312 aa15.55■□□□□ 0.08
CTDSP1-202ENST00000428361 MYO1FO00160 1098 aa15.54■□□□□ 0.08
CTDSP1-202ENST00000428361 TNFRSF10CO14798 259 aa15.54■□□□□ 0.08
CTDSP1-202ENST00000428361 GCATO75600 419 aa15.54■□□□□ 0.08
CTDSP1-202ENST00000428361 RECQL5O94762 991 aaPredicted RBP15.54■□□□□ 0.08
CTDSP1-202ENST00000428361 SKILP12757 684 aa15.54■□□□□ 0.08
CTDSP1-202ENST00000428361 RGRP47804 291 aa15.54■□□□□ 0.08
CTDSP1-202ENST00000428361 ZBED6P86452 979 aa15.54■□□□□ 0.08
CTDSP1-202ENST00000428361 FANCCQ00597 558 aa15.54■□□□□ 0.08
CTDSP1-202ENST00000428361 PEX6Q13608 980 aa15.54■□□□□ 0.08
CTDSP1-202ENST00000428361 ALG11Q2TAA5 492 aa15.54■□□□□ 0.08
CTDSP1-202ENST00000428361 E4F1Q66K89 784 aaPredicted RBP15.54■□□□□ 0.08
CTDSP1-202ENST00000428361 LIPIQ6XZB0 460 aa15.54■□□□□ 0.08
CTDSP1-202ENST00000428361 CYP4V2Q6ZWL3 525 aaPredicted RBP15.54■□□□□ 0.08
CTDSP1-202ENST00000428361 POLNQ7Z5Q5 900 aa15.54■□□□□ 0.08
CTDSP1-202ENST00000428361 ARL14Q8N4G2 192 aa15.54■□□□□ 0.08
CTDSP1-202ENST00000428361 NUDCD1Q96RS6 583 aa15.54■□□□□ 0.08
CTDSP1-202ENST00000428361 TRIM7Q9C029 511 aa15.54■□□□□ 0.08
CTDSP1-202ENST00000428361 TCEAL2Q9H3H9 227 aaPredicted RBP15.54■□□□□ 0.08
CTDSP1-202ENST00000428361 WDR26Q9H7D7 661 aa15.54■□□□□ 0.08
CTDSP1-202ENST00000428361 ANAPC7Q9UJX3 599 aa15.54■□□□□ 0.08
CTDSP1-202ENST00000428361 LUC7L2Q9Y383 392 aaKnown RBP15.54■□□□□ 0.08
CTDSP1-202ENST00000428361 PCDHGA8Q9Y5G5 932 aa15.54■□□□□ 0.08
CTDSP1-202ENST00000428361 TRAFD1O14545 582 aaPredicted RBP15.53■□□□□ 0.08
CTDSP1-202ENST00000428361 MPOP05164 745 aa15.53■□□□□ 0.08
CTDSP1-202ENST00000428361 CYP2A6P11509 494 aaPredicted RBP15.53■□□□□ 0.08
CTDSP1-202ENST00000428361 MYF5P13349 255 aa15.53■□□□□ 0.08
CTDSP1-202ENST00000428361 TGM2P21980 687 aa15.53■□□□□ 0.08
CTDSP1-202ENST00000428361 EIF3IQ13347 325 aaKnown RBP15.53■□□□□ 0.08
CTDSP1-202ENST00000428361 KRT81Q14533 505 aa15.53■□□□□ 0.08
CTDSP1-202ENST00000428361 SMTNL2Q2TAL5 461 aa15.53■□□□□ 0.08
CTDSP1-202ENST00000428361 RD3Q7Z3Z2 195 aa15.53■□□□□ 0.08
CTDSP1-202ENST00000428361 LSM14AQ8ND56 463 aaKnown RBP15.53■□□□□ 0.08
CTDSP1-202ENST00000428361 OR56A4Q8NGH8 313 aa15.53■□□□□ 0.08
CTDSP1-202ENST00000428361 WDR36Q8NI36 951 aaKnown RBP15.53■□□□□ 0.08
CTDSP1-202ENST00000428361 TSACCQ96A04 125 aaPredicted RBP15.53■□□□□ 0.08
CTDSP1-202ENST00000428361 FCRL3Q96P31 734 aaPredicted RBP15.53■□□□□ 0.08
CTDSP1-202ENST00000428361 CSPG4P5Q96PW8 444 aa15.53■□□□□ 0.08
CTDSP1-202ENST00000428361 RBM15Q96T37 977 aaKnown RBP eCLIP15.53■□□□□ 0.08
CTDSP1-202ENST00000428361 CCDC3Q9BQI4 270 aa15.53■□□□□ 0.08
CTDSP1-202ENST00000428361 MGME1Q9BQP7 344 aa15.53■□□□□ 0.08
CTDSP1-202ENST00000428361 FUCA2Q9BTY2 467 aa15.53■□□□□ 0.08
CTDSP1-202ENST00000428361 DPH1Q9BZG8 443 aa15.53■□□□□ 0.08
CTDSP1-202ENST00000428361 STRADBQ9C0K7 418 aa15.53■□□□□ 0.08
CTDSP1-202ENST00000428361 CLPBQ9H078 707 aa15.53■□□□□ 0.08
CTDSP1-202ENST00000428361 GULP1Q9UBP9 304 aa15.53■□□□□ 0.08
CTDSP1-202ENST00000428361 PHTF1Q9UMS5 762 aa15.53■□□□□ 0.08
CTDSP1-202ENST00000428361 GPR34Q9UPC5 381 aa15.53■□□□□ 0.08
CTDSP1-202ENST00000428361 OR1A2Q9Y585 309 aa15.53■□□□□ 0.08
CTDSP1-202ENST00000428361 ITPR1Q14643 2758 aa15.52■□□□□ 0.08
CTDSP1-202ENST00000428361 TEX51A0A1B0GUA7 166 aa15.52■□□□□ 0.08
CTDSP1-202ENST00000428361 TK2O00142 265 aa15.52■□□□□ 0.08
CTDSP1-202ENST00000428361 PSMD11O00231 422 aa15.52■□□□□ 0.08
CTDSP1-202ENST00000428361 ZW10O43264 779 aa15.52■□□□□ 0.08
CTDSP1-202ENST00000428361 HTRA2O43464 458 aaPredicted RBP15.52■□□□□ 0.08
CTDSP1-202ENST00000428361 CPP00450 1065 aa15.52■□□□□ 0.08
CTDSP1-202ENST00000428361 RARAP10276 462 aa15.52■□□□□ 0.08
CTDSP1-202ENST00000428361 ITPKBP27987 946 aa15.52■□□□□ 0.08
CTDSP1-202ENST00000428361 TMPRSS3P57727 454 aa15.52■□□□□ 0.08
CTDSP1-202ENST00000428361 SLC10A7Q0GE19 358 aa15.52■□□□□ 0.08
CTDSP1-202ENST00000428361 CCDC173Q0VFZ6 552 aa15.52■□□□□ 0.08
CTDSP1-202ENST00000428361 RALGDSQ12967 914 aa15.52■□□□□ 0.08
CTDSP1-202ENST00000428361 ACOX1Q15067 660 aa15.52■□□□□ 0.08
CTDSP1-202ENST00000428361 NFKBIBQ15653 356 aa15.52■□□□□ 0.08
CTDSP1-202ENST00000428361 SOWAHCQ53LP3 525 aaPredicted RBP15.52■□□□□ 0.08
CTDSP1-202ENST00000428361 C3orf38Q5JPI3 329 aa15.52■□□□□ 0.08
CTDSP1-202ENST00000428361 MARC1Q5VT66 337 aa15.52■□□□□ 0.08
CTDSP1-202ENST00000428361 TIGD7Q6NT04 549 aaPredicted RBP15.52■□□□□ 0.08
CTDSP1-202ENST00000428361 ARHGAP36Q6ZRI8 547 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms