RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 DPY19L1Q2PZI1 675 aa16.16■□□□□ 0.18
C9orf3-206ENST00000428313 ADPRMQ3LIE5 342 aa16.16■□□□□ 0.18
C9orf3-206ENST00000428313 FSTL4Q6MZW2 842 aa16.16■□□□□ 0.18
C9orf3-206ENST00000428313 IDO2Q6ZQW0 420 aa16.16■□□□□ 0.18
C9orf3-206ENST00000428313 ZNF598Q86UK7 904 aaKnown RBP16.16■□□□□ 0.18
C9orf3-206ENST00000428313 NDNFQ8TB73 568 aa16.16■□□□□ 0.18
C9orf3-206ENST00000428313 ELMO2Q96JJ3 720 aa16.16■□□□□ 0.18
C9orf3-206ENST00000428313 DHX35Q9H5Z1 703 aaKnown RBP16.16■□□□□ 0.18
C9orf3-206ENST00000428313 SLCO3A1Q9UIG8 710 aa16.16■□□□□ 0.18
C9orf3-206ENST00000428313 PDE10AQ9Y233 779 aa16.16■□□□□ 0.18
C9orf3-206ENST00000428313 PCDHGA8Q9Y5G5 932 aa16.16■□□□□ 0.18
C9orf3-206ENST00000428313 MAGEB16A2A368 324 aa16.15■□□□□ 0.18
C9orf3-206ENST00000428313 NME4O00746 187 aa16.15■□□□□ 0.18
C9orf3-206ENST00000428313 POLR1CO15160 346 aaPredicted RBP16.15■□□□□ 0.18
C9orf3-206ENST00000428313 DDHD2O94830 711 aa16.15■□□□□ 0.18
C9orf3-206ENST00000428313 LDLRP01130 860 aa16.15■□□□□ 0.18
C9orf3-206ENST00000428313 CHRNA1P02708 482 aa16.15■□□□□ 0.18
C9orf3-206ENST00000428313 POLBP06746 335 aa16.15■□□□□ 0.18
C9orf3-206ENST00000428313 ERVK-10P10266 1014 aa16.15■□□□□ 0.18
C9orf3-206ENST00000428313 POLR2CP19387 275 aaPredicted RBP16.15■□□□□ 0.18
C9orf3-206ENST00000428313 PCMT1P22061 227 aa16.15■□□□□ 0.18
C9orf3-206ENST00000428313 IL4RP24394 825 aa16.15■□□□□ 0.18
C9orf3-206ENST00000428313 ATP4BP51164 291 aa16.15■□□□□ 0.18
C9orf3-206ENST00000428313 GALNT1Q10472 559 aaPredicted RBP16.15■□□□□ 0.18
C9orf3-206ENST00000428313 FRG1Q14331 258 aaKnown RBP16.15■□□□□ 0.18
C9orf3-206ENST00000428313 SMU1Q2TAY7 513 aa16.15■□□□□ 0.18
C9orf3-206ENST00000428313 HSDL1Q3SXM5 330 aa16.15■□□□□ 0.18
C9orf3-206ENST00000428313 STEAP3Q658P3 488 aa16.15■□□□□ 0.18
C9orf3-206ENST00000428313 DENND1BQ6P3S1 775 aa16.15■□□□□ 0.18
C9orf3-206ENST00000428313 C8orf59Q8N0T1 100 aaPredicted RBP16.15■□□□□ 0.18
C9orf3-206ENST00000428313 TMEM151AQ8N4L1 468 aa16.15■□□□□ 0.18
C9orf3-206ENST00000428313 CCDC24Q8N4L8 307 aa16.15■□□□□ 0.18
C9orf3-206ENST00000428313 SPPL2BQ8TCT7 592 aa16.15■□□□□ 0.18
C9orf3-206ENST00000428313 BSNDQ8WZ55 320 aa16.15■□□□□ 0.18
C9orf3-206ENST00000428313 TFAP2BQ92481 460 aa16.15■□□□□ 0.18
C9orf3-206ENST00000428313 CENPOQ9BU64 300 aa16.15■□□□□ 0.18
C9orf3-206ENST00000428313 DIABLOQ9NR28 239 aa16.15■□□□□ 0.18
C9orf3-206ENST00000428313 CCDC167Q9P0B6 97 aa16.15■□□□□ 0.18
C9orf3-206ENST00000428313 DHX15O43143 795 aaKnown RBP16.15■□□□□ 0.18
C9orf3-206ENST00000428313 NDUFB10O96000 172 aa16.15■□□□□ 0.18
C9orf3-206ENST00000428313 HDCP19113 662 aa16.15■□□□□ 0.18
C9orf3-206ENST00000428313 MGAT1P26572 445 aa16.15■□□□□ 0.18
C9orf3-206ENST00000428313 ETV3P41162 512 aa16.15■□□□□ 0.18
C9orf3-206ENST00000428313 ACOX1Q15067 660 aa16.15■□□□□ 0.18
C9orf3-206ENST00000428313 PUS10Q3MIT2 529 aaKnown RBP16.15■□□□□ 0.18
C9orf3-206ENST00000428313 XKR9Q5GH70 373 aa16.15■□□□□ 0.18
C9orf3-206ENST00000428313 CATSPEREQ5SY80 951 aa16.15■□□□□ 0.18
C9orf3-206ENST00000428313 LAYNQ6UX15 382 aa16.15■□□□□ 0.18
C9orf3-206ENST00000428313 STRA8Q7Z7C7 330 aa16.15■□□□□ 0.18
C9orf3-206ENST00000428313 CDR2LQ86X02 465 aaPredicted RBP16.15■□□□□ 0.18
C9orf3-206ENST00000428313 CCDC103Q8IW40 242 aa16.15■□□□□ 0.18
C9orf3-206ENST00000428313 EXOC8Q8IYI6 725 aa16.15■□□□□ 0.18
C9orf3-206ENST00000428313 HACE1Q8IYU2 909 aa16.15■□□□□ 0.18
C9orf3-206ENST00000428313 MFSD3Q96ES6 412 aa16.15■□□□□ 0.18
C9orf3-206ENST00000428313 TMEM246Q9BRR3 403 aa16.15■□□□□ 0.18
C9orf3-206ENST00000428313 LRRC4Q9HBW1 653 aa16.15■□□□□ 0.18
C9orf3-206ENST00000428313 GMPR2Q9P2T1 348 aaKnown RBP16.15■□□□□ 0.18
C9orf3-206ENST00000428313 WBP11Q9Y2W2 641 aaKnown RBP16.15■□□□□ 0.18
C9orf3-206ENST00000428313 SPEF1Q9Y4P9 236 aa16.15■□□□□ 0.18
C9orf3-206ENST00000428313 STYXL1Q9Y6J8 313 aa16.15■□□□□ 0.18
C9orf3-206ENST00000428313 ZNF541Q9H0D2 1346 aa16.14■□□□□ 0.17
C9orf3-206ENST00000428313 CENPXA8MT69 81 aa16.14■□□□□ 0.17
C9orf3-206ENST00000428313 TK2O00142 265 aa16.14■□□□□ 0.17
C9orf3-206ENST00000428313 GAS2O43903 313 aaKnown RBP16.14■□□□□ 0.17
C9orf3-206ENST00000428313 ZBTB7AO95365 584 aa16.14■□□□□ 0.17
C9orf3-206ENST00000428313 ITGBL1O95965 494 aaPredicted RBP16.14■□□□□ 0.17
C9orf3-206ENST00000428313 KRT19P08727 400 aa16.14■□□□□ 0.17
C9orf3-206ENST00000428313 SBK3P0C264 359 aa16.14■□□□□ 0.17
C9orf3-206ENST00000428313 SPNP16150 400 aa16.14■□□□□ 0.17
C9orf3-206ENST00000428313 DNAJB1P25685 340 aa16.14■□□□□ 0.17
C9orf3-206ENST00000428313 HADHAP40939 763 aa16.14■□□□□ 0.17
C9orf3-206ENST00000428313 ALDH3A2P51648 485 aa16.14■□□□□ 0.17
C9orf3-206ENST00000428313 ZNF143P52747 638 aaPredicted RBP16.14■□□□□ 0.17
C9orf3-206ENST00000428313 RACK1P63244 317 aaKnown RBP16.14■□□□□ 0.17
C9orf3-206ENST00000428313 CRADDP78560 199 aa16.14■□□□□ 0.17
C9orf3-206ENST00000428313 PSMD5Q16401 504 aa16.14■□□□□ 0.17
C9orf3-206ENST00000428313 ZFP69Q49AA0 526 aa16.14■□□□□ 0.17
C9orf3-206ENST00000428313 BOLA3Q53S33 107 aa16.14■□□□□ 0.17
C9orf3-206ENST00000428313 BRMS1LQ5PSV4 323 aa16.14■□□□□ 0.17
C9orf3-206ENST00000428313 SNAP47Q5SQN1 464 aa16.14■□□□□ 0.17
C9orf3-206ENST00000428313 C6orf141Q5SZD1 244 aa16.14■□□□□ 0.17
C9orf3-206ENST00000428313 IL17RDQ8NFM7 739 aa16.14■□□□□ 0.17
C9orf3-206ENST00000428313 STYXQ8WUJ0 223 aa16.14■□□□□ 0.17
C9orf3-206ENST00000428313 JPH3Q8WXH2 748 aaPredicted RBP16.14■□□□□ 0.17
C9orf3-206ENST00000428313 GLMNQ92990 594 aa16.14■□□□□ 0.17
C9orf3-206ENST00000428313 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.14■□□□□ 0.174e-7■■■■■ 53.9
C9orf3-206ENST00000428313 MOCOSQ96EN8 888 aa16.14■□□□□ 0.17
C9orf3-206ENST00000428313 TSNARE1Q96NA8 513 aa16.14■□□□□ 0.17
C9orf3-206ENST00000428313 RDH12Q96NR8 316 aa16.14■□□□□ 0.17
C9orf3-206ENST00000428313 SLIRPQ9GZT3 109 aaKnown RBP16.14■□□□□ 0.17
C9orf3-206ENST00000428313 TASP1Q9H6P5 420 aa16.14■□□□□ 0.17
C9orf3-206ENST00000428313 MRM3Q9HC36 420 aaKnown RBP16.14■□□□□ 0.17
C9orf3-206ENST00000428313 TJP2Q9UDY2 1190 aa16.14■□□□□ 0.17
C9orf3-206ENST00000428313 HES2Q9Y543 173 aa16.14■□□□□ 0.17
C9orf3-206ENST00000428313 PCDHGB1Q9Y5G3 927 aa16.14■□□□□ 0.17
C9orf3-206ENST00000428313 TMEM150BA6NC51 233 aa16.14■□□□□ 0.17
C9orf3-206ENST00000428313 ZNF487B1APH4 448 aa16.14■□□□□ 0.17
C9orf3-206ENST00000428313 H0YCG3 227 aa16.14■□□□□ 0.17
C9orf3-206ENST00000428313 ARPC2O15144 300 aa16.14■□□□□ 0.17
C9orf3-206ENST00000428313 PRPSAP2O60256 369 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms