RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 CBFA2T2O43439 604 aa18.49■□□□□ 0.55
PSPC1-202ENST00000427943 OPA1O60313 960 aa18.49■□□□□ 0.55
PSPC1-202ENST00000427943 RECQL5O94762 991 aaPredicted RBP18.49■□□□□ 0.55
PSPC1-202ENST00000427943 MAP3K6O95382 1288 aa18.49■□□□□ 0.55
PSPC1-202ENST00000427943 CPP00450 1065 aa18.49■□□□□ 0.55
PSPC1-202ENST00000427943 TSHRP16473 764 aa18.49■□□□□ 0.55
PSPC1-202ENST00000427943 CR2P20023 1033 aa18.49■□□□□ 0.55
PSPC1-202ENST00000427943 IL4RP24394 825 aa18.49■□□□□ 0.55
PSPC1-202ENST00000427943 DUSP3P51452 185 aaPredicted RBP18.49■□□□□ 0.55
PSPC1-202ENST00000427943 TRIM14Q14142 442 aa18.49■□□□□ 0.55
PSPC1-202ENST00000427943 DPYSL3Q14195 570 aa18.49■□□□□ 0.55
PSPC1-202ENST00000427943 AGERQ15109 404 aa18.49■□□□□ 0.55
PSPC1-202ENST00000427943 SLC18A3Q16572 532 aa18.49■□□□□ 0.55
PSPC1-202ENST00000427943 ALG11Q2TAA5 492 aa18.49■□□□□ 0.55
PSPC1-202ENST00000427943 ENPP7Q6UWV6 458 aa18.49■□□□□ 0.55
PSPC1-202ENST00000427943 RD3Q7Z3Z2 195 aa18.49■□□□□ 0.55
PSPC1-202ENST00000427943 HID1Q8IV36 788 aa18.49■□□□□ 0.55
PSPC1-202ENST00000427943 BBS5Q8N3I7 341 aa18.49■□□□□ 0.55
PSPC1-202ENST00000427943 RNF214Q8ND24 703 aa18.49■□□□□ 0.55
PSPC1-202ENST00000427943 CTNNBL1Q8WYA6 563 aaPredicted RBP18.49■□□□□ 0.55
PSPC1-202ENST00000427943 NUDCD1Q96RS6 583 aa18.49■□□□□ 0.55
PSPC1-202ENST00000427943 MGME1Q9BQP7 344 aa18.49■□□□□ 0.55
PSPC1-202ENST00000427943 CLPBQ9H078 707 aa18.49■□□□□ 0.55
PSPC1-202ENST00000427943 TSPY26PQ9H489 355 aa18.49■□□□□ 0.55
PSPC1-202ENST00000427943 DEF6Q9H4E7 631 aa18.49■□□□□ 0.55
PSPC1-202ENST00000427943 USP29Q9HBJ7 922 aa18.49■□□□□ 0.55
PSPC1-202ENST00000427943 NOD2Q9HC29 1040 aa18.49■□□□□ 0.55
PSPC1-202ENST00000427943 RCOR3Q9P2K3 495 aaPredicted RBP18.49■□□□□ 0.55
PSPC1-202ENST00000427943 B4GALT6Q9UBX8 382 aa18.49■□□□□ 0.55
PSPC1-202ENST00000427943 PCDHB1Q9Y5F3 818 aa18.49■□□□□ 0.55
PSPC1-202ENST00000427943 TMEM110-MUSTN1A8MSY1 372 aa18.48■□□□□ 0.55
PSPC1-202ENST00000427943 TPP1O14773 563 aa18.48■□□□□ 0.55
PSPC1-202ENST00000427943 SOCS5O75159 536 aa18.48■□□□□ 0.55
PSPC1-202ENST00000427943 PROSCO94903 275 aa18.48■□□□□ 0.55
PSPC1-202ENST00000427943 GP1BAP07359 652 aa18.48■□□□□ 0.55
PSPC1-202ENST00000427943 ANXA6P08133 673 aa18.48■□□□□ 0.55
PSPC1-202ENST00000427943 H2AFZP0C0S5 128 aa18.48■□□□□ 0.55
PSPC1-202ENST00000427943 GM2AP17900 193 aa18.48■□□□□ 0.55
PSPC1-202ENST00000427943 HTR1BP28222 390 aa18.48■□□□□ 0.55
PSPC1-202ENST00000427943 HSPA9P38646 679 aaKnown RBP18.48■□□□□ 0.55
PSPC1-202ENST00000427943 MMP13P45452 471 aa18.48■□□□□ 0.55
PSPC1-202ENST00000427943 PEX5P50542 639 aa18.48■□□□□ 0.55
PSPC1-202ENST00000427943 ARSEP51690 589 aa18.48■□□□□ 0.55
PSPC1-202ENST00000427943 HK3P52790 923 aa18.48■□□□□ 0.55
PSPC1-202ENST00000427943 TAS2R40P59535 323 aa18.48■□□□□ 0.55
PSPC1-202ENST00000427943 POLR2LP62875 67 aaKnown RBP18.48■□□□□ 0.55
PSPC1-202ENST00000427943 TRAF2Q12933 501 aa18.48■□□□□ 0.55
PSPC1-202ENST00000427943 MTM1Q13496 603 aa18.48■□□□□ 0.55
PSPC1-202ENST00000427943 COL28A1Q2UY09 1125 aa18.48■□□□□ 0.55
PSPC1-202ENST00000427943 MARC1Q5VT66 337 aa18.48■□□□□ 0.55
PSPC1-202ENST00000427943 KCTD16Q68DU8 428 aa18.48■□□□□ 0.55
PSPC1-202ENST00000427943 NCBP2-AS2Q69YL0 99 aa18.48■□□□□ 0.55
PSPC1-202ENST00000427943 CRTC1Q6UUV9 634 aa18.48■□□□□ 0.55
PSPC1-202ENST00000427943 H2AFVQ71UI9 128 aa18.48■□□□□ 0.55
PSPC1-202ENST00000427943 EFL1Q7Z2Z2 1120 aaKnown RBP18.48■□□□□ 0.55
PSPC1-202ENST00000427943 SLC35F3Q8IY50 421 aa18.48■□□□□ 0.55
PSPC1-202ENST00000427943 FAM71BQ8TC56 605 aa18.48■□□□□ 0.55
PSPC1-202ENST00000427943 MAPK15Q8TD08 544 aa18.48■□□□□ 0.55
PSPC1-202ENST00000427943 NSMCE1Q8WV22 266 aa18.48■□□□□ 0.55
PSPC1-202ENST00000427943 HNRNPLLQ8WVV9 542 aaKnown RBP18.48■□□□□ 0.55
PSPC1-202ENST00000427943 TBATAQ96M53 351 aa18.48■□□□□ 0.55
PSPC1-202ENST00000427943 DCBLD2Q96PD2 775 aa18.48■□□□□ 0.55
PSPC1-202ENST00000427943 DNAJC7Q99615 494 aa18.48■□□□□ 0.55
PSPC1-202ENST00000427943 NT5MQ9NPB1 228 aa18.48■□□□□ 0.55
PSPC1-202ENST00000427943 UVRAGQ9P2Y5 699 aa18.48■□□□□ 0.55
PSPC1-202ENST00000427943 SALL4Q9UJQ4 1053 aa18.48■□□□□ 0.55
PSPC1-202ENST00000427943 LAMA5O15230 3695 aa18.48■□□□□ 0.55
PSPC1-202ENST00000427943 KIF26BQ2KJY2 2108 aa18.47■□□□□ 0.55
PSPC1-202ENST00000427943 CFAP69A5D8W1 941 aa18.47■□□□□ 0.55
PSPC1-202ENST00000427943 LMO7DNF2Z398 122 aa18.47■□□□□ 0.55
PSPC1-202ENST00000427943 HTRA2O43464 458 aaPredicted RBP18.47■□□□□ 0.55
PSPC1-202ENST00000427943 RASGRP1O95267 797 aa18.47■□□□□ 0.55
PSPC1-202ENST00000427943 RTP5Q14D33 572 aa18.47■□□□□ 0.55
PSPC1-202ENST00000427943 ACOX1Q15067 660 aa18.47■□□□□ 0.55
PSPC1-202ENST00000427943 NR0B2Q15466 257 aa18.47■□□□□ 0.55
PSPC1-202ENST00000427943 ASTE1Q2TB18 679 aaPredicted RBP18.47■□□□□ 0.55
PSPC1-202ENST00000427943 C6orf132Q5T0Z8 1188 aa18.47■□□□□ 0.55
PSPC1-202ENST00000427943 CDCP2Q5VXM1 449 aa18.47■□□□□ 0.55
PSPC1-202ENST00000427943 OR8K1Q8NGG5 319 aa18.47■□□□□ 0.55
PSPC1-202ENST00000427943 PCDH19Q8TAB3 1148 aa18.47■□□□□ 0.55
PSPC1-202ENST00000427943 PDXPQ96GD0 296 aa18.47■□□□□ 0.55
PSPC1-202ENST00000427943 WDR92Q96MX6 357 aa18.47■□□□□ 0.55
PSPC1-202ENST00000427943 BOCQ9BWV1 1114 aa18.47■□□□□ 0.55
PSPC1-202ENST00000427943 NRSN2Q9GZP1 204 aa18.47■□□□□ 0.55
PSPC1-202ENST00000427943 ABCG4Q9H172 646 aa18.47■□□□□ 0.55
PSPC1-202ENST00000427943 KLQ9UEF7 1012 aa18.47■□□□□ 0.55
PSPC1-202ENST00000427943 DOLKQ9UPQ8 538 aa18.47■□□□□ 0.55
PSPC1-202ENST00000427943 EME2A4GXA9 379 aaPredicted RBP18.46■□□□□ 0.55
PSPC1-202ENST00000427943 YY2O15391 372 aa18.46■□□□□ 0.55
PSPC1-202ENST00000427943 TLX3O43711 291 aaPredicted RBP18.46■□□□□ 0.55
PSPC1-202ENST00000427943 CTSEP14091 401 aa18.46■□□□□ 0.55
PSPC1-202ENST00000427943 TGM2P21980 687 aa18.46■□□□□ 0.55
PSPC1-202ENST00000427943 BLKP51451 505 aa18.46■□□□□ 0.55
PSPC1-202ENST00000427943 SRP54P61011 504 aaKnown RBP18.46■□□□□ 0.55
PSPC1-202ENST00000427943 PTPRRQ15256 657 aa18.46■□□□□ 0.55
PSPC1-202ENST00000427943 CNGA3Q16281 694 aa18.46■□□□□ 0.55
PSPC1-202ENST00000427943 PERM1Q5SV97 790 aa18.46■□□□□ 0.55
PSPC1-202ENST00000427943 DENND2CQ68D51 928 aa18.46■□□□□ 0.55
PSPC1-202ENST00000427943 VSTM4Q8IW00 320 aa18.46■□□□□ 0.55
PSPC1-202ENST00000427943 CACTIN-AS1Q8N1I8 211 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms