RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 ZNF140P52738 457 aaPredicted RBP12.12□□□□□ -0.47
RFC4-206ENST00000427785 TMPRSS15P98073 1019 aa12.12□□□□□ -0.47
RFC4-206ENST00000427785 SEMG2Q02383 582 aa12.12□□□□□ -0.47
RFC4-206ENST00000427785 MGAT5Q09328 741 aa12.12□□□□□ -0.47
RFC4-206ENST00000427785 GPS2Q13227 327 aa12.12□□□□□ -0.47
RFC4-206ENST00000427785 HNRNPA1L2Q32P51 320 aaKnown RBP12.12□□□□□ -0.47
RFC4-206ENST00000427785 PREPLQ4J6C6 727 aaPredicted RBP12.12□□□□□ -0.47
RFC4-206ENST00000427785 HSP90B2PQ58FF3 399 aa12.12□□□□□ -0.47
RFC4-206ENST00000427785 KCTD16Q68DU8 428 aa12.12□□□□□ -0.47
RFC4-206ENST00000427785 KIAA0930Q6ICG6 404 aaPredicted RBP12.12□□□□□ -0.47
RFC4-206ENST00000427785 FSTL4Q6MZW2 842 aa12.12□□□□□ -0.47
RFC4-206ENST00000427785 GDPD4Q6W3E5 623 aa12.12□□□□□ -0.47
RFC4-206ENST00000427785 LYSMD3Q7Z3D4 306 aa12.12□□□□□ -0.47
RFC4-206ENST00000427785 KCNMB4Q86W47 210 aa12.12□□□□□ -0.47
RFC4-206ENST00000427785 CACUL1Q86Y37 369 aa12.12□□□□□ -0.47
RFC4-206ENST00000427785 SUGP1Q8IWZ8 645 aaKnown RBP12.12□□□□□ -0.47
RFC4-206ENST00000427785 PLPP6Q8IY26 295 aa12.12□□□□□ -0.47
RFC4-206ENST00000427785 ZNF513Q8N8E2 541 aaPredicted RBP12.12□□□□□ -0.47
RFC4-206ENST00000427785 MDGA1Q8NFP4 955 aa12.12□□□□□ -0.47
RFC4-206ENST00000427785 OR13C4Q8NGS5 318 aa12.12□□□□□ -0.47
RFC4-206ENST00000427785 ECHDC3Q96DC8 303 aa12.12□□□□□ -0.47
RFC4-206ENST00000427785 CYTH2Q99418 400 aa12.12□□□□□ -0.47
RFC4-206ENST00000427785 CPEB1Q9BZB8 566 aaKnown RBP12.12□□□□□ -0.47
RFC4-206ENST00000427785 TMEM245Q9H330 911 aa12.12□□□□□ -0.47
RFC4-206ENST00000427785 SUV39H2Q9H5I1 410 aa12.12□□□□□ -0.47
RFC4-206ENST00000427785 C20orf96Q9NUD7 363 aaPredicted RBP12.12□□□□□ -0.47
RFC4-206ENST00000427785 BCCIPQ9P287 314 aaKnown RBP eCLIP12.12□□□□□ -0.47
RFC4-206ENST00000427785 PSMC3IPQ9P2W1 217 aaPredicted RBP12.12□□□□□ -0.47
RFC4-206ENST00000427785 FAM169AQ9Y6X4 670 aa12.12□□□□□ -0.47
RFC4-206ENST00000427785 NUMA1Q14980 2115 aa12.11□□□□□ -0.47
RFC4-206ENST00000427785 A0A0J9YYE9 177 aa12.11□□□□□ -0.47
RFC4-206ENST00000427785 MROH6A6NGR9 719 aa12.11□□□□□ -0.47
RFC4-206ENST00000427785 NPIPB15A6NHN6 443 aaPredicted RBP12.11□□□□□ -0.47
RFC4-206ENST00000427785 FOXO6A8MYZ6 492 aa12.11□□□□□ -0.47
RFC4-206ENST00000427785 ANKRD66B4E2M5 251 aa12.11□□□□□ -0.47
RFC4-206ENST00000427785 K7EQS6 105 aa12.11□□□□□ -0.47
RFC4-206ENST00000427785 RGS16O15492 202 aaPredicted RBP12.11□□□□□ -0.47
RFC4-206ENST00000427785 RNF40O75150 1001 aa12.11□□□□□ -0.47
RFC4-206ENST00000427785 TCEA3O75764 348 aa12.11□□□□□ -0.47
RFC4-206ENST00000427785 FAM155BO75949 473 aa12.11□□□□□ -0.47
RFC4-206ENST00000427785 ALDH1A2O94788 518 aa12.11□□□□□ -0.47
RFC4-206ENST00000427785 TRBC1P01850 177 aa12.11□□□□□ -0.47
RFC4-206ENST00000427785 EPHX1P07099 455 aa12.11□□□□□ -0.47
RFC4-206ENST00000427785 CHRM1P11229 460 aaPredicted RBP12.11□□□□□ -0.47
RFC4-206ENST00000427785 TIE1P35590 1138 aa12.11□□□□□ -0.47
RFC4-206ENST00000427785 MSH2P43246 934 aa12.11□□□□□ -0.47
RFC4-206ENST00000427785 PSMD8P48556 350 aa12.11□□□□□ -0.47
RFC4-206ENST00000427785 METAP1P53582 386 aa12.11□□□□□ -0.47
RFC4-206ENST00000427785 RPL26P61254 145 aaKnown RBP12.11□□□□□ -0.47
RFC4-206ENST00000427785 GRM3Q14832 879 aa12.11□□□□□ -0.47
RFC4-206ENST00000427785 TAF1AQ15573 450 aaPredicted RBP12.11□□□□□ -0.47
RFC4-206ENST00000427785 CNGA3Q16281 694 aa12.11□□□□□ -0.47
RFC4-206ENST00000427785 ARSIQ5FYB1 569 aa12.11□□□□□ -0.47
RFC4-206ENST00000427785 C9orf64Q5T6V5 341 aa12.11□□□□□ -0.47
RFC4-206ENST00000427785 TPRG1Q6ZUI0 275 aa12.11□□□□□ -0.47
RFC4-206ENST00000427785 MARK2Q7KZI7 788 aaKnown RBP12.11□□□□□ -0.47
RFC4-206ENST00000427785 RALGPS2Q86X27 583 aaPredicted RBP12.11□□□□□ -0.47
RFC4-206ENST00000427785 CHPFQ8IZ52 775 aa12.11□□□□□ -0.47
RFC4-206ENST00000427785 TTC30BQ8N4P2 665 aa12.11□□□□□ -0.47
RFC4-206ENST00000427785 OTUD6BQ8N6M0 293 aa12.11□□□□□ -0.47
RFC4-206ENST00000427785 KDM1BQ8NB78 822 aa12.11□□□□□ -0.47
RFC4-206ENST00000427785 OR13J1Q8NGT2 312 aa12.11□□□□□ -0.47
RFC4-206ENST00000427785 DCAKDQ8WVC6 231 aa12.11□□□□□ -0.47
RFC4-206ENST00000427785 SLC44A1Q8WWI5 657 aa12.11□□□□□ -0.47
RFC4-206ENST00000427785 OR8D1Q8WZ84 308 aa12.11□□□□□ -0.47
RFC4-206ENST00000427785 ZNF641Q96N77 438 aaPredicted RBP12.11□□□□□ -0.47
RFC4-206ENST00000427785 DHRS4Q9BTZ2 278 aa12.11□□□□□ -0.47
RFC4-206ENST00000427785 ROPN1BQ9BZX4 212 aaPredicted RBP12.11□□□□□ -0.47
RFC4-206ENST00000427785 C8orf33Q9H7E9 229 aaPredicted RBP12.11□□□□□ -0.47
RFC4-206ENST00000427785 ROPN1Q9HAT0 212 aaPredicted RBP12.11□□□□□ -0.47
RFC4-206ENST00000427785 MED4Q9NPJ6 270 aa12.11□□□□□ -0.47
RFC4-206ENST00000427785 TRPV5Q9NQA5 729 aa12.11□□□□□ -0.47
RFC4-206ENST00000427785 IARS2Q9NSE4 1012 aaKnown RBP12.11□□□□□ -0.47
RFC4-206ENST00000427785 EURLQ9NYK6 297 aa12.11□□□□□ -0.47
RFC4-206ENST00000427785 MOCS1Q9NZB8 636 aa12.11□□□□□ -0.47
RFC4-206ENST00000427785 VPS18Q9P253 973 aa12.11□□□□□ -0.47
RFC4-206ENST00000427785 LGALS13Q9UHV8 139 aa12.11□□□□□ -0.47
RFC4-206ENST00000427785 RPL26L1Q9UNX3 145 aaKnown RBP12.11□□□□□ -0.47
RFC4-206ENST00000427785 FAM50BQ9Y247 325 aa12.11□□□□□ -0.47
RFC4-206ENST00000427785 PSAT1Q9Y617 370 aa12.11□□□□□ -0.47
RFC4-206ENST00000427785 STON1Q9Y6Q2 735 aa12.11□□□□□ -0.47
RFC4-206ENST00000427785 TRPM6Q9BX84 2022 aa12.11□□□□□ -0.47
RFC4-206ENST00000427785 C1orf232A0A0U1RR37 186 aa12.1□□□□□ -0.47
RFC4-206ENST00000427785 TSPAN11A1L157 253 aa12.1□□□□□ -0.47
RFC4-206ENST00000427785 MAGEB16A2A368 324 aa12.1□□□□□ -0.47
RFC4-206ENST00000427785 OR51F1A6NGY5 319 aa12.1□□□□□ -0.47
RFC4-206ENST00000427785 A8MX80 341 aa12.1□□□□□ -0.47
RFC4-206ENST00000427785 UPK3BL1B0FP48 263 aa12.1□□□□□ -0.47
RFC4-206ENST00000427785 LOC730098B7Z3J9 87 aa12.1□□□□□ -0.47
RFC4-206ENST00000427785 UPK3BL2E5RIL1 263 aa12.1□□□□□ -0.47
RFC4-206ENST00000427785 PLK4O00444 970 aa12.1□□□□□ -0.47
RFC4-206ENST00000427785 KPNA3O00505 521 aaPredicted RBP12.1□□□□□ -0.47
RFC4-206ENST00000427785 CDH16O75309 829 aa12.1□□□□□ -0.47
RFC4-206ENST00000427785 RPP40O75818 363 aaKnown RBP12.1□□□□□ -0.47
RFC4-206ENST00000427785 VAPBO95292 243 aa12.1□□□□□ -0.47
RFC4-206ENST00000427785 PAPSS2O95340 614 aaPredicted RBP12.1□□□□□ -0.47
RFC4-206ENST00000427785 CRTAMO95727 393 aa12.1□□□□□ -0.47
RFC4-206ENST00000427785 INHBAP08476 426 aa12.1□□□□□ -0.47
RFC4-206ENST00000427785 SRFP11831 508 aa12.1□□□□□ -0.47
RFC4-206ENST00000427785 PAMP19021 973 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms