RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 METTL5Q9NRN9 209 aaKnown RBP14.75□□□□□ -0.05
PDAP1-202ENST00000426447 TUBD1Q9UJT1 453 aa14.75□□□□□ -0.05
PDAP1-202ENST00000426447 ANAPC2Q9UJX6 822 aa14.75□□□□□ -0.05
PDAP1-202ENST00000426447 BOD1L1Q8NFC6 3051 aa14.74□□□□□ -0.05
PDAP1-202ENST00000426447 HGSO14964 777 aaPredicted RBP14.74□□□□□ -0.05
PDAP1-202ENST00000426447 SDC4P31431 198 aa14.74□□□□□ -0.05
PDAP1-202ENST00000426447 RAPGEF1Q13905 1077 aa14.74□□□□□ -0.05
PDAP1-202ENST00000426447 GRM3Q14832 879 aa14.74□□□□□ -0.05
PDAP1-202ENST00000426447 C15orf59Q2T9L4 293 aaPredicted RBP14.74□□□□□ -0.05
PDAP1-202ENST00000426447 RAB6CQ53S08 254 aa14.74□□□□□ -0.05
PDAP1-202ENST00000426447 EFHC2Q5JST6 749 aa14.74□□□□□ -0.05
PDAP1-202ENST00000426447 MANEALQ5VSG8 457 aa14.74□□□□□ -0.05
PDAP1-202ENST00000426447 ARCQ7LC44 396 aa14.74□□□□□ -0.05
PDAP1-202ENST00000426447 CCL4L1Q8NHW4 92 aa14.74□□□□□ -0.05
PDAP1-202ENST00000426447 RXFP2Q8WXD0 754 aa14.74□□□□□ -0.05
PDAP1-202ENST00000426447 FUBP1Q96AE4 644 aaKnown RBP14.74□□□□□ -0.05
PDAP1-202ENST00000426447 CATSPER2Q96P56 530 aa14.74□□□□□ -0.05
PDAP1-202ENST00000426447 RAB6CQ9H0N0 254 aa14.74□□□□□ -0.05
PDAP1-202ENST00000426447 FGF22Q9HCT0 170 aa14.74□□□□□ -0.05
PDAP1-202ENST00000426447 SIX2Q9NPC8 291 aa14.74□□□□□ -0.05
PDAP1-202ENST00000426447 ZNF71Q9NQZ8 489 aaPredicted RBP14.74□□□□□ -0.05
PDAP1-202ENST00000426447 ZNF891A8MT65 544 aaPredicted RBP14.73□□□□□ -0.05
PDAP1-202ENST00000426447 TNFRSF10CO14798 259 aa14.73□□□□□ -0.05
PDAP1-202ENST00000426447 LSM8O95777 96 aaKnown RBP14.73□□□□□ -0.05
PDAP1-202ENST00000426447 PRKCGP05129 697 aa14.73□□□□□ -0.05
PDAP1-202ENST00000426447 FGF3P11487 239 aaPredicted RBP14.73□□□□□ -0.05
PDAP1-202ENST00000426447 LIFP15018 202 aa14.73□□□□□ -0.05
PDAP1-202ENST00000426447 UGT1A3P35503 534 aa14.73□□□□□ -0.05
PDAP1-202ENST00000426447 KIAA1024LP59773 190 aa14.73□□□□□ -0.05
PDAP1-202ENST00000426447 SERINC3Q13530 473 aa14.73□□□□□ -0.05
PDAP1-202ENST00000426447 AGERQ15109 404 aa14.73□□□□□ -0.05
PDAP1-202ENST00000426447 BRAT1Q6PJG6 821 aa14.73□□□□□ -0.05
PDAP1-202ENST00000426447 PHLDB2Q86SQ0 1253 aa14.73□□□□□ -0.05
PDAP1-202ENST00000426447 DNAAF5Q86Y56 855 aa14.73□□□□□ -0.05
PDAP1-202ENST00000426447 CACNA2D3Q8IZS8 1091 aa14.73□□□□□ -0.05
PDAP1-202ENST00000426447 FAM26EQ8N5C1 309 aa14.73□□□□□ -0.05
PDAP1-202ENST00000426447 C9orf43Q8TAL5 461 aaPredicted RBP14.73□□□□□ -0.05
PDAP1-202ENST00000426447 CCDC74BQ96LY2 380 aa14.73□□□□□ -0.05
PDAP1-202ENST00000426447 ZNF641Q96N77 438 aaPredicted RBP14.73□□□□□ -0.05
PDAP1-202ENST00000426447 NUDT22Q9BRQ3 303 aa14.73□□□□□ -0.05
PDAP1-202ENST00000426447 CDH19Q9H159 772 aa14.73□□□□□ -0.05
PDAP1-202ENST00000426447 SUDS3Q9H7L9 328 aaPredicted RBP14.73□□□□□ -0.05
PDAP1-202ENST00000426447 MAN2B2Q9Y2E5 1009 aa14.73□□□□□ -0.05
PDAP1-202ENST00000426447 ATP8A1Q9Y2Q0 1164 aa14.73□□□□□ -0.05
PDAP1-202ENST00000426447 PTPN13Q12923 2485 aa14.73□□□□□ -0.05
PDAP1-202ENST00000426447 COL12A1Q99715 3063 aa14.72□□□□□ -0.05
PDAP1-202ENST00000426447 AHCTF1Q8WYP5 2266 aa14.72□□□□□ -0.05
PDAP1-202ENST00000426447 IGHV5-10-1A0A0J9YXX1 117 aa14.72□□□□□ -0.05
PDAP1-202ENST00000426447 PDE2AO00408 941 aaPredicted RBP14.72□□□□□ -0.05
PDAP1-202ENST00000426447 TEX33O43247 280 aa14.72□□□□□ -0.05
PDAP1-202ENST00000426447 RECQL5O94762 991 aaPredicted RBP14.72□□□□□ -0.05
PDAP1-202ENST00000426447 EPHB2P29323 1055 aa14.72□□□□□ -0.05
PDAP1-202ENST00000426447 CSTF2P33240 577 aaKnown RBP eCLIP14.72□□□□□ -0.05
PDAP1-202ENST00000426447 PPM1FP49593 454 aaPredicted RBP14.72□□□□□ -0.05
PDAP1-202ENST00000426447 MAZP56270 477 aaKnown RBP14.72□□□□□ -0.05
PDAP1-202ENST00000426447 CYTH1Q15438 398 aa14.72□□□□□ -0.05
PDAP1-202ENST00000426447 CLPPQ16740 277 aaPredicted RBP14.72□□□□□ -0.05
PDAP1-202ENST00000426447 TSR1Q2NL82 804 aaKnown RBP14.72□□□□□ -0.05
PDAP1-202ENST00000426447 CCDC14Q49A88 953 aa14.72□□□□□ -0.05
PDAP1-202ENST00000426447 NAA35Q5VZE5 725 aa14.72□□□□□ -0.05
PDAP1-202ENST00000426447 CAMK1DQ8IU85 385 aa14.72□□□□□ -0.05
PDAP1-202ENST00000426447 AGBL5Q8NDL9 886 aa14.72□□□□□ -0.05
PDAP1-202ENST00000426447 ZDHHC1Q8WTX9 485 aa14.72□□□□□ -0.05
PDAP1-202ENST00000426447 ART4Q93070 314 aa14.72□□□□□ -0.05
PDAP1-202ENST00000426447 ASPSCR1Q9BZE9 553 aa14.72□□□□□ -0.05
PDAP1-202ENST00000426447 KLC2Q9H0B6 622 aa14.72□□□□□ -0.05
PDAP1-202ENST00000426447 LRRC4CQ9HCJ2 640 aa14.72□□□□□ -0.05
PDAP1-202ENST00000426447 SPATS2LQ9NUQ6 558 aaKnown RBP14.72□□□□□ -0.05
PDAP1-202ENST00000426447 SLC39A1Q9NY26 324 aa14.72□□□□□ -0.05
PDAP1-202ENST00000426447 RWDD2AQ9UIY3 292 aa14.72□□□□□ -0.05
PDAP1-202ENST00000426447 PCDHGA3Q9Y5H0 932 aa14.72□□□□□ -0.05
PDAP1-202ENST00000426447 B3GALT1Q9Y5Z6 326 aa14.72□□□□□ -0.05
PDAP1-202ENST00000426447 TSPAN11A1L157 253 aa14.71□□□□□ -0.05
PDAP1-202ENST00000426447 RASA4BC9J798 803 aa14.71□□□□□ -0.05
PDAP1-202ENST00000426447 CAPN5O15484 640 aaPredicted RBP14.71□□□□□ -0.05
PDAP1-202ENST00000426447 RASA4O43374 803 aa14.71□□□□□ -0.05
PDAP1-202ENST00000426447 ELFN1P0C7U0 828 aa14.71□□□□□ -0.05
PDAP1-202ENST00000426447 CD1CP29017 333 aa14.71□□□□□ -0.05
PDAP1-202ENST00000426447 MMP12P39900 470 aa14.71□□□□□ -0.05
PDAP1-202ENST00000426447 STAT1P42224 750 aa14.71□□□□□ -0.05
PDAP1-202ENST00000426447 LIMK2P53671 638 aa14.71□□□□□ -0.05
PDAP1-202ENST00000426447 YBEYP58557 167 aaPredicted RBP14.71□□□□□ -0.05
PDAP1-202ENST00000426447 TRA2AQ13595 282 aaKnown RBP eCLIP14.71□□□□□ -0.051e-6■■□□□ 14.2
PDAP1-202ENST00000426447 TPD52L1Q16890 204 aaPredicted RBP14.71□□□□□ -0.05
PDAP1-202ENST00000426447 STRADAQ7RTN6 431 aa14.71□□□□□ -0.05
PDAP1-202ENST00000426447 NRSN1Q8IZ57 195 aa14.71□□□□□ -0.05
PDAP1-202ENST00000426447 CCDC185Q8N715 623 aa14.71□□□□□ -0.05
PDAP1-202ENST00000426447 RTL3Q8N8U3 475 aaKnown RBP14.71□□□□□ -0.05
PDAP1-202ENST00000426447 GPT2Q8TD30 523 aa14.71□□□□□ -0.05
PDAP1-202ENST00000426447 PMEPA1Q969W9 287 aa14.71□□□□□ -0.05
PDAP1-202ENST00000426447 LGR4Q9BXB1 951 aa14.71□□□□□ -0.05
PDAP1-202ENST00000426447 GSDMCQ9BYG8 508 aa14.71□□□□□ -0.05
PDAP1-202ENST00000426447 ZMYND15Q9H091 742 aa14.71□□□□□ -0.05
PDAP1-202ENST00000426447 NOL6Q9H6R4 1146 aaKnown RBP14.71□□□□□ -0.05
PDAP1-202ENST00000426447 WDR26Q9H7D7 661 aa14.71□□□□□ -0.05
PDAP1-202ENST00000426447 CARS2Q9HA77 564 aaKnown RBP14.71□□□□□ -0.05
PDAP1-202ENST00000426447 LHX3Q9UBR4 397 aa14.71□□□□□ -0.05
PDAP1-202ENST00000426447 UBA2Q9UBT2 640 aaPredicted RBP14.71□□□□□ -0.05
PDAP1-202ENST00000426447 DOCK4Q8N1I0 1966 aa14.71□□□□□ -0.06
PDAP1-202ENST00000426447 DOPEY2Q9Y3R5 2298 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms