RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 NLGN3Q9NZ94 848 aa18.42■□□□□ 0.54
SMARCAL1-205ENST00000425815 B4GALT6Q9UBX8 382 aa18.42■□□□□ 0.54
SMARCAL1-205ENST00000425815 ZMIZ1Q9ULJ6 1067 aa18.42■□□□□ 0.54
SMARCAL1-205ENST00000425815 KMT2BQ9UMN6 2715 aaPredicted RBP18.42■□□□□ 0.54
SMARCAL1-205ENST00000425815 ZNF487B1APH4 448 aa18.41■□□□□ 0.54
SMARCAL1-205ENST00000425815 TAF4O00268 1085 aa18.41■□□□□ 0.54
SMARCAL1-205ENST00000425815 KRT37O76014 449 aa18.41■□□□□ 0.54
SMARCAL1-205ENST00000425815 PGLSO95336 258 aa18.41■□□□□ 0.54
SMARCAL1-205ENST00000425815 PDHA1P08559 390 aa18.41■□□□□ 0.54
SMARCAL1-205ENST00000425815 COMTP21964 271 aa18.41■□□□□ 0.54
SMARCAL1-205ENST00000425815 PEX5P50542 639 aa18.41■□□□□ 0.54
SMARCAL1-205ENST00000425815 PTK2BQ14289 1009 aa18.41■□□□□ 0.54
SMARCAL1-205ENST00000425815 KCTD16Q68DU8 428 aa18.41■□□□□ 0.54
SMARCAL1-205ENST00000425815 SLC9A4Q6AI14 798 aa18.41■□□□□ 0.54
SMARCAL1-205ENST00000425815 ALG1LQ6GMV1 187 aa18.41■□□□□ 0.54
SMARCAL1-205ENST00000425815 MACC1Q6ZN28 852 aa18.41■□□□□ 0.54
SMARCAL1-205ENST00000425815 BBS5Q8N3I7 341 aa18.41■□□□□ 0.54
SMARCAL1-205ENST00000425815 GALNT15Q8N3T1 639 aa18.41■□□□□ 0.54
SMARCAL1-205ENST00000425815 FAM181AQ8N9Y4 354 aa18.41■□□□□ 0.54
SMARCAL1-205ENST00000425815 ARRDC2Q8TBH0 407 aa18.41■□□□□ 0.54
SMARCAL1-205ENST00000425815 MRFAP1L1Q96HT8 127 aa18.41■□□□□ 0.54
SMARCAL1-205ENST00000425815 COQ10AQ96MF6 247 aa18.41■□□□□ 0.54
SMARCAL1-205ENST00000425815 SMIM14Q96QK8 99 aa18.41■□□□□ 0.54
SMARCAL1-205ENST00000425815 SEMA3CQ99985 751 aa18.41■□□□□ 0.54
SMARCAL1-205ENST00000425815 APOOQ9BUR5 198 aa18.41■□□□□ 0.54
SMARCAL1-205ENST00000425815 RBM22Q9NW64 420 aaKnown RBP eCLIP18.41■□□□□ 0.54
SMARCAL1-205ENST00000425815 PHTF1Q9UMS5 762 aa18.41■□□□□ 0.54
SMARCAL1-205ENST00000425815 PPIL1Q9Y3C6 166 aa18.41■□□□□ 0.54
SMARCAL1-205ENST00000425815 OR1A2Q9Y585 309 aa18.41■□□□□ 0.54
SMARCAL1-205ENST00000425815 CSNK1G3Q9Y6M4 447 aa18.41■□□□□ 0.54
SMARCAL1-205ENST00000425815 MAP1BP46821 2468 aaKnown RBP18.4■□□□□ 0.54
SMARCAL1-205ENST00000425815 ARID1BQ8NFD5 2236 aaPredicted RBP18.4■□□□□ 0.54
SMARCAL1-205ENST00000425815 A0A0U1RQS6 177 aa18.4■□□□□ 0.54
SMARCAL1-205ENST00000425815 LRRD1A4D1F6 860 aa18.4■□□□□ 0.54
SMARCAL1-205ENST00000425815 AQP9O43315 295 aa18.4■□□□□ 0.54
SMARCAL1-205ENST00000425815 PCCBP05166 539 aa18.4■□□□□ 0.54
SMARCAL1-205ENST00000425815 CKMT1AP12532 417 aa18.4■□□□□ 0.54
SMARCAL1-205ENST00000425815 CCNB1P14635 433 aa18.4■□□□□ 0.54
SMARCAL1-205ENST00000425815 LHCGRP22888 699 aa18.4■□□□□ 0.54
SMARCAL1-205ENST00000425815 SLC1A1P43005 524 aa18.4■□□□□ 0.54
SMARCAL1-205ENST00000425815 THOP1P52888 689 aa18.4■□□□□ 0.54
SMARCAL1-205ENST00000425815 HADHBP55084 474 aaKnown RBP18.4■□□□□ 0.54
SMARCAL1-205ENST00000425815 DSC2Q02487 901 aa18.4■□□□□ 0.54
SMARCAL1-205ENST00000425815 NIPAL4Q0D2K0 466 aa18.4■□□□□ 0.54
SMARCAL1-205ENST00000425815 ILKQ13418 452 aa18.4■□□□□ 0.54
SMARCAL1-205ENST00000425815 TMPRSS12Q86WS5 348 aa18.4■□□□□ 0.54
SMARCAL1-205ENST00000425815 VSIG1Q86XK7 387 aa18.4■□□□□ 0.54
SMARCAL1-205ENST00000425815 PHACTR4Q8IZ21 702 aa18.4■□□□□ 0.54
SMARCAL1-205ENST00000425815 LMX1AQ8TE12 382 aa18.4■□□□□ 0.54
SMARCAL1-205ENST00000425815 PDCD6IPQ8WUM4 868 aaKnown RBP18.4■□□□□ 0.54
SMARCAL1-205ENST00000425815 HDAC11Q96DB2 347 aa18.4■□□□□ 0.54
SMARCAL1-205ENST00000425815 APOLD1Q96LR9 279 aa18.4■□□□□ 0.54
SMARCAL1-205ENST00000425815 LGMNQ99538 433 aa18.4■□□□□ 0.54
SMARCAL1-205ENST00000425815 CLPBQ9H078 707 aa18.4■□□□□ 0.54
SMARCAL1-205ENST00000425815 PCDHA13Q9Y5I0 950 aa18.4■□□□□ 0.54
SMARCAL1-205ENST00000425815 RAI2Q9Y5P3 530 aa18.4■□□□□ 0.54
SMARCAL1-205ENST00000425815 ALG6Q9Y672 507 aa18.4■□□□□ 0.54
SMARCAL1-205ENST00000425815 TP53BP1Q12888 1972 aaPredicted RBP18.4■□□□□ 0.54
SMARCAL1-205ENST00000425815 ZFHX4Q86UP3 3567 aa18.4■□□□□ 0.54
SMARCAL1-205ENST00000425815 FREM2Q5SZK8 3169 aa18.39■□□□□ 0.53
SMARCAL1-205ENST00000425815 A0A1W2PQ67 120 aa18.39■□□□□ 0.53
SMARCAL1-205ENST00000425815 TMEM8BA6NDV4 472 aa18.39■□□□□ 0.53
SMARCAL1-205ENST00000425815 NEMP2A6NFY4 417 aa18.39■□□□□ 0.53
SMARCAL1-205ENST00000425815 HEXIM1O94992 359 aaKnown RBP18.39■□□□□ 0.53
SMARCAL1-205ENST00000425815 CPP00450 1065 aa18.39■□□□□ 0.53
SMARCAL1-205ENST00000425815 PRLP01236 227 aa18.39■□□□□ 0.53
SMARCAL1-205ENST00000425815 ELFN1P0C7U0 828 aa18.39■□□□□ 0.53
SMARCAL1-205ENST00000425815 CDK4P11802 303 aa18.39■□□□□ 0.53
SMARCAL1-205ENST00000425815 FECHP22830 423 aa18.39■□□□□ 0.53
SMARCAL1-205ENST00000425815 TRIM23P36406 574 aa18.39■□□□□ 0.53
SMARCAL1-205ENST00000425815 ITKQ08881 620 aa18.39■□□□□ 0.53
SMARCAL1-205ENST00000425815 C1orf61Q13536 156 aa18.39■□□□□ 0.53
SMARCAL1-205ENST00000425815 CNGA3Q16281 694 aa18.39■□□□□ 0.53
SMARCAL1-205ENST00000425815 ZFYVE27Q5T4F4 411 aa18.39■□□□□ 0.53
SMARCAL1-205ENST00000425815 TIGD7Q6NT04 549 aaPredicted RBP18.39■□□□□ 0.53
SMARCAL1-205ENST00000425815 MFSD7Q6UXD7 560 aa18.39■□□□□ 0.53
SMARCAL1-205ENST00000425815 NPNTQ6UXI9 565 aa18.39■□□□□ 0.53
SMARCAL1-205ENST00000425815 CCDC170Q8IYT3 715 aa18.39■□□□□ 0.53
SMARCAL1-205ENST00000425815 CNTD1Q8N815 330 aa18.39■□□□□ 0.53
SMARCAL1-205ENST00000425815 TSACCQ96A04 125 aaPredicted RBP18.39■□□□□ 0.53
SMARCAL1-205ENST00000425815 RNF25Q96BH1 459 aaPredicted RBP18.39■□□□□ 0.53
SMARCAL1-205ENST00000425815 SCRN2Q96FV2 425 aa18.39■□□□□ 0.53
SMARCAL1-205ENST00000425815 MCCC1Q96RQ3 725 aaPredicted RBP18.39■□□□□ 0.53
SMARCAL1-205ENST00000425815 LRRC61Q9BV99 259 aa18.39■□□□□ 0.53
SMARCAL1-205ENST00000425815 GOLPH3Q9H4A6 298 aa18.39■□□□□ 0.53
SMARCAL1-205ENST00000425815 SALL4Q9UJQ4 1053 aa18.39■□□□□ 0.53
SMARCAL1-205ENST00000425815 USP24Q9UPU5 2620 aa18.39■□□□□ 0.53
SMARCAL1-205ENST00000425815 PLXNB3Q9ULL4 1909 aa18.39■□□□□ 0.53
SMARCAL1-205ENST00000425815 RCCD1A6NED2 376 aa18.38■□□□□ 0.53
SMARCAL1-205ENST00000425815 NPIPB15A6NHN6 443 aaPredicted RBP18.38■□□□□ 0.53
SMARCAL1-205ENST00000425815 H3BM21 787 aa18.38■□□□□ 0.53
SMARCAL1-205ENST00000425815 HLA-DQB2P05538 268 aa18.38■□□□□ 0.53
SMARCAL1-205ENST00000425815 CELA2BP08218 269 aaPredicted RBP18.38■□□□□ 0.53
SMARCAL1-205ENST00000425815 MX2P20592 715 aa18.38■□□□□ 0.53
SMARCAL1-205ENST00000425815 VIPR1P32241 457 aa18.38■□□□□ 0.53
SMARCAL1-205ENST00000425815 INSM1Q01101 510 aaPredicted RBP18.38■□□□□ 0.53
SMARCAL1-205ENST00000425815 PPARDQ03181 441 aa18.38■□□□□ 0.53
SMARCAL1-205ENST00000425815 PPIDQ08752 370 aaKnown RBP18.38■□□□□ 0.53
SMARCAL1-205ENST00000425815 MTM1Q13496 603 aa18.38■□□□□ 0.53
SMARCAL1-205ENST00000425815 NFATC4Q14934 902 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms