RNA–Protein interactions for RNA: ENST00000425451.2

HDAC7-208, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-208ENST00000425451 ATP8A1Q9Y2Q0 1164 aa17.68■□□□□ 0.42
HDAC7-208ENST00000425451 PRAMEF11O60813 436 aa17.67■□□□□ 0.42
HDAC7-208ENST00000425451 WISP1O95388 367 aa17.67■□□□□ 0.42
HDAC7-208ENST00000425451 GLB1P16278 677 aa17.67■□□□□ 0.42
HDAC7-208ENST00000425451 ITIH1P19827 911 aa17.67■□□□□ 0.42
HDAC7-208ENST00000425451 RPL7AP62424 266 aaKnown RBP17.67■□□□□ 0.42
HDAC7-208ENST00000425451 KCNC4Q03721 635 aa17.67■□□□□ 0.42
HDAC7-208ENST00000425451 RALGDSQ12967 914 aa17.67■□□□□ 0.42
HDAC7-208ENST00000425451 GRM3Q14832 879 aa17.67■□□□□ 0.42
HDAC7-208ENST00000425451 KRT31Q15323 416 aa17.67■□□□□ 0.42
HDAC7-208ENST00000425451 PPP1R15BQ5SWA1 713 aa17.67■□□□□ 0.42
HDAC7-208ENST00000425451 USP53Q70EK8 1073 aa17.67■□□□□ 0.42
HDAC7-208ENST00000425451 TMPRSS9Q7Z410 1059 aa17.67■□□□□ 0.42
HDAC7-208ENST00000425451 ATL2Q8NHH9 583 aa17.67■□□□□ 0.42
HDAC7-208ENST00000425451 SGF29Q96ES7 293 aa17.67■□□□□ 0.42
HDAC7-208ENST00000425451 TUBGCP5Q96RT8 1024 aa17.67■□□□□ 0.42
HDAC7-208ENST00000425451 CATSPERBQ9H7T0 1116 aa17.67■□□□□ 0.42
HDAC7-208ENST00000425451 MRPL40Q9NQ50 206 aaKnown RBP17.67■□□□□ 0.42
HDAC7-208ENST00000425451 WDR70Q9NW82 654 aa17.67■□□□□ 0.42
HDAC7-208ENST00000425451 SIK3Q9Y2K2 1263 aa17.67■□□□□ 0.42
HDAC7-208ENST00000425451 LOXL2Q9Y4K0 774 aa17.67■□□□□ 0.42
HDAC7-208ENST00000425451 RNF215Q9Y6U7 377 aa17.67■□□□□ 0.42
HDAC7-208ENST00000425451 UNC13CQ8NB66 2214 aa17.67■□□□□ 0.42
HDAC7-208ENST00000425451 TLN1Q9Y490 2541 aaKnown RBP17.66■□□□□ 0.42
HDAC7-208ENST00000425451 SPTA1P02549 2419 aa17.66■□□□□ 0.42
HDAC7-208ENST00000425451 PRAMEF33A0A0G2JMD5 474 aa17.66■□□□□ 0.42
HDAC7-208ENST00000425451 CFAP69A5D8W1 941 aa17.66■□□□□ 0.42
HDAC7-208ENST00000425451 PRAMEF10O60809 474 aa17.66■□□□□ 0.42
HDAC7-208ENST00000425451 RECQL5O94762 991 aaPredicted RBP17.66■□□□□ 0.42
HDAC7-208ENST00000425451 CALB1P05937 261 aa17.66■□□□□ 0.42
HDAC7-208ENST00000425451 JMJD7P0C870 316 aa17.66■□□□□ 0.42
HDAC7-208ENST00000425451 LIPCP11150 499 aa17.66■□□□□ 0.42
HDAC7-208ENST00000425451 PNLIPP16233 465 aa17.66■□□□□ 0.42
HDAC7-208ENST00000425451 GM2AP17900 193 aa17.66■□□□□ 0.42
HDAC7-208ENST00000425451 TRIM23P36406 574 aa17.66■□□□□ 0.42
HDAC7-208ENST00000425451 ETV5P41161 510 aa17.66■□□□□ 0.42
HDAC7-208ENST00000425451 STAT1P42224 750 aa17.66■□□□□ 0.42
HDAC7-208ENST00000425451 CSNK1DP48730 415 aa17.66■□□□□ 0.42
HDAC7-208ENST00000425451 AIF1P55008 147 aa17.66■□□□□ 0.42
HDAC7-208ENST00000425451 KIAA1024LP59773 190 aa17.66■□□□□ 0.42
HDAC7-208ENST00000425451 NFATC3Q12968 1075 aa17.66■□□□□ 0.42
HDAC7-208ENST00000425451 CT47A1Q5JQC4 288 aaPredicted RBP17.66■□□□□ 0.42
HDAC7-208ENST00000425451 CDKAL1Q5VV42 579 aa17.66■□□□□ 0.42
HDAC7-208ENST00000425451 SPRED1Q7Z699 444 aa17.66■□□□□ 0.42
HDAC7-208ENST00000425451 TSEN2Q8NCE0 465 aaKnown RBP17.66■□□□□ 0.42
HDAC7-208ENST00000425451 FAM46DQ8NEK8 389 aa17.66■□□□□ 0.42
HDAC7-208ENST00000425451 OR56A4Q8NGH8 313 aa17.66■□□□□ 0.42
HDAC7-208ENST00000425451 EXTL1Q92935 676 aa17.66■□□□□ 0.42
HDAC7-208ENST00000425451 ECHDC3Q96DC8 303 aa17.66■□□□□ 0.42
HDAC7-208ENST00000425451 LGR4Q9BXB1 951 aa17.66■□□□□ 0.42
HDAC7-208ENST00000425451 TMEM168Q9H0V1 697 aa17.66■□□□□ 0.42
HDAC7-208ENST00000425451 ANKRD36A6QL64 1941 aa17.66■□□□□ 0.42
HDAC7-208ENST00000425451 UBR5O95071 2799 aaPredicted RBP17.66■□□□□ 0.42
HDAC7-208ENST00000425451 AGRPO00253 132 aa17.65■□□□□ 0.42
HDAC7-208ENST00000425451 FGF10O15520 208 aaPredicted RBP17.65■□□□□ 0.42
HDAC7-208ENST00000425451 ITGB2P05107 769 aa17.65■□□□□ 0.42
HDAC7-208ENST00000425451 HOXC4P09017 264 aaPredicted RBP17.65■□□□□ 0.42
HDAC7-208ENST00000425451 ITGB6P18564 788 aa17.65■□□□□ 0.42
HDAC7-208ENST00000425451 NDST2P52849 883 aa17.65■□□□□ 0.42
HDAC7-208ENST00000425451 OGDHQ02218 1023 aa17.65■□□□□ 0.42
HDAC7-208ENST00000425451 HLTFQ14527 1009 aaKnown RBP eCLIP17.65■□□□□ 0.42
HDAC7-208ENST00000425451 C14orf28Q4W4Y0 310 aa17.65■□□□□ 0.42
HDAC7-208ENST00000425451 XKR5Q6UX68 686 aa17.65■□□□□ 0.42
HDAC7-208ENST00000425451 LIPIQ6XZB0 460 aa17.65■□□□□ 0.42
HDAC7-208ENST00000425451 PRICKLE2Q7Z3G6 844 aa17.65■□□□□ 0.42
HDAC7-208ENST00000425451 TAF8Q7Z7C8 310 aa17.65■□□□□ 0.42
HDAC7-208ENST00000425451 SRLQ86TD4 932 aa17.65■□□□□ 0.42
HDAC7-208ENST00000425451 ZFAND4Q86XD8 727 aa17.65■□□□□ 0.42
HDAC7-208ENST00000425451 SLITRK4Q8IW52 837 aa17.65■□□□□ 0.42
HDAC7-208ENST00000425451 PELI3Q8N2H9 469 aa17.65■□□□□ 0.42
HDAC7-208ENST00000425451 CCL4L1Q8NHW4 92 aa17.65■□□□□ 0.42
HDAC7-208ENST00000425451 ENOX1Q8TC92 643 aaKnown RBP17.65■□□□□ 0.42
HDAC7-208ENST00000425451 TMEM159Q96B96 161 aa17.65■□□□□ 0.42
HDAC7-208ENST00000425451 CELF6Q96J87 481 aaKnown RBP17.65■□□□□ 0.42
HDAC7-208ENST00000425451 NSMCE3Q96MG7 304 aa17.65■□□□□ 0.42
HDAC7-208ENST00000425451 MCEEQ96PE7 176 aa17.65■□□□□ 0.42
HDAC7-208ENST00000425451 CNPY3Q9BT09 278 aa17.65■□□□□ 0.42
HDAC7-208ENST00000425451 SLC39A8Q9C0K1 460 aa17.65■□□□□ 0.42
HDAC7-208ENST00000425451 STARD5Q9NSY2 213 aa17.65■□□□□ 0.42
HDAC7-208ENST00000425451 FOXJ2Q9P0K8 574 aa17.65■□□□□ 0.42
HDAC7-208ENST00000425451 LRIT1Q9P2V4 623 aa17.65■□□□□ 0.42
HDAC7-208ENST00000425451 NAV2Q8IVL1 2488 aa17.65■□□□□ 0.42
HDAC7-208ENST00000425451 C9orf172C9J069 976 aa17.64■□□□□ 0.41
HDAC7-208ENST00000425451 TNFRSF10CO14798 259 aa17.64■□□□□ 0.41
HDAC7-208ENST00000425451 WT1P19544 449 aaPredicted RBP17.64■□□□□ 0.41
HDAC7-208ENST00000425451 PAPOLAP51003 745 aaKnown RBP17.64■□□□□ 0.41
HDAC7-208ENST00000425451 B4GALNT1Q00973 533 aa17.64■□□□□ 0.41
HDAC7-208ENST00000425451 CFAP58Q5T655 872 aa17.64■□□□□ 0.41
HDAC7-208ENST00000425451 AFMIDQ63HM1 303 aa17.64■□□□□ 0.41
HDAC7-208ENST00000425451 DNAJC24Q6P3W2 148 aa17.64■□□□□ 0.41
HDAC7-208ENST00000425451 DTX1Q86Y01 620 aa17.64■□□□□ 0.41
HDAC7-208ENST00000425451 USP7Q93009 1102 aa17.64■□□□□ 0.41
HDAC7-208ENST00000425451 SEMA6CQ9H3T2 930 aa17.64■□□□□ 0.41
HDAC7-208ENST00000425451 ATP13A3Q9H7F0 1226 aa17.64■□□□□ 0.41
HDAC7-208ENST00000425451 GPATCH2LQ9NWQ4 482 aa17.64■□□□□ 0.41
HDAC7-208ENST00000425451 B4DGG1 531 aa17.63■□□□□ 0.41
HDAC7-208ENST00000425451 CACNB4O00305 520 aaPredicted RBP17.63■□□□□ 0.41
HDAC7-208ENST00000425451 TRAFD1O14545 582 aaPredicted RBP17.63■□□□□ 0.41
HDAC7-208ENST00000425451 B4GAT1O43505 415 aa17.63■□□□□ 0.41
HDAC7-208ENST00000425451 NUDT21O43809 227 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms