RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 HGFP14210 728 aa12.33□□□□□ -0.44
HLA-DQB3-203ENST00000425319 TPI1P60174 286 aa12.33□□□□□ -0.44
HLA-DQB3-203ENST00000425319 TRA2AQ13595 282 aaKnown RBP eCLIP12.33□□□□□ -0.44
HLA-DQB3-203ENST00000425319 RFTN1Q14699 578 aaPredicted RBP12.33□□□□□ -0.44
HLA-DQB3-203ENST00000425319 ACOX1Q15067 660 aa12.33□□□□□ -0.44
HLA-DQB3-203ENST00000425319 LINC00303Q3SY05 128 aa12.33□□□□□ -0.44
HLA-DQB3-203ENST00000425319 AMZ1Q400G9 498 aa12.33□□□□□ -0.44
HLA-DQB3-203ENST00000425319 CERCAMQ5T4B2 595 aa12.33□□□□□ -0.44
HLA-DQB3-203ENST00000425319 FAM72AQ5TYM5 149 aa12.33□□□□□ -0.44
HLA-DQB3-203ENST00000425319 FAM72DQ6L9T8 149 aa12.33□□□□□ -0.44
HLA-DQB3-203ENST00000425319 PHLDB2Q86SQ0 1253 aa12.33□□□□□ -0.44
HLA-DQB3-203ENST00000425319 SRLQ86TD4 932 aa12.33□□□□□ -0.44
HLA-DQB3-203ENST00000425319 FAM72BQ86X60 149 aa12.33□□□□□ -0.44
HLA-DQB3-203ENST00000425319 UMODL1-AS1Q8N2C9 162 aa12.33□□□□□ -0.44
HLA-DQB3-203ENST00000425319 LZTR1Q8N653 840 aa12.33□□□□□ -0.44
HLA-DQB3-203ENST00000425319 SLC30A5Q8TAD4 765 aa12.33□□□□□ -0.44
HLA-DQB3-203ENST00000425319 EPS8L1Q8TE68 723 aa12.33□□□□□ -0.44
HLA-DQB3-203ENST00000425319 NSMCE1Q8WV22 266 aa12.33□□□□□ -0.44
HLA-DQB3-203ENST00000425319 CENPIQ92674 756 aaPredicted RBP12.33□□□□□ -0.44
HLA-DQB3-203ENST00000425319 KIAA1143Q96AT1 154 aaPredicted RBP12.33□□□□□ -0.44
HLA-DQB3-203ENST00000425319 AHCYL2Q96HN2 611 aaKnown RBP12.33□□□□□ -0.44
HLA-DQB3-203ENST00000425319 CINPQ9BW66 212 aaPredicted RBP12.33□□□□□ -0.44
HLA-DQB3-203ENST00000425319 WDR26Q9H7D7 661 aa12.33□□□□□ -0.44
HLA-DQB3-203ENST00000425319 CAAP1Q9H8G2 361 aa12.33□□□□□ -0.44
HLA-DQB3-203ENST00000425319 GEMIN8Q9NWZ8 242 aaKnown RBP12.33□□□□□ -0.44
HLA-DQB3-203ENST00000425319 PRAMEF33A0A0G2JMD5 474 aa12.32□□□□□ -0.44
HLA-DQB3-203ENST00000425319 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.32□□□□□ -0.44
HLA-DQB3-203ENST00000425319 FAM170AA1A519 330 aa12.32□□□□□ -0.44
HLA-DQB3-203ENST00000425319 SIGLEC16A6NMB1 481 aa12.32□□□□□ -0.44
HLA-DQB3-203ENST00000425319 PYCARD-AS1I3L0S3 204 aa12.32□□□□□ -0.44
HLA-DQB3-203ENST00000425319 SUV39H1O43463 412 aa12.32□□□□□ -0.44
HLA-DQB3-203ENST00000425319 NOBOXO60393 691 aa12.32□□□□□ -0.44
HLA-DQB3-203ENST00000425319 PRAMEF10O60809 474 aa12.32□□□□□ -0.44
HLA-DQB3-203ENST00000425319 GADD45BO75293 160 aaPredicted RBP12.32□□□□□ -0.44
HLA-DQB3-203ENST00000425319 PIGNO95427 931 aa12.32□□□□□ -0.44
HLA-DQB3-203ENST00000425319 ITIH2P19823 946 aa12.32□□□□□ -0.44
HLA-DQB3-203ENST00000425319 ITIH1P19827 911 aa12.32□□□□□ -0.44
HLA-DQB3-203ENST00000425319 RFC1P35251 1148 aaPredicted RBP12.32□□□□□ -0.44
HLA-DQB3-203ENST00000425319 SOX5P35711 763 aa12.32□□□□□ -0.44
HLA-DQB3-203ENST00000425319 GPR3P46089 330 aa12.32□□□□□ -0.44
HLA-DQB3-203ENST00000425319 CCR10P46092 362 aa12.32□□□□□ -0.44
HLA-DQB3-203ENST00000425319 PDX1P52945 283 aa12.32□□□□□ -0.44
HLA-DQB3-203ENST00000425319 POLR2FP61218 127 aaKnown RBP12.32□□□□□ -0.44
HLA-DQB3-203ENST00000425319 NSUN2Q08J23 767 aaKnown RBP eCLIP12.32□□□□□ -0.44
HLA-DQB3-203ENST00000425319 CYTH1Q15438 398 aa12.32□□□□□ -0.44
HLA-DQB3-203ENST00000425319 TBR1Q16650 682 aa12.32□□□□□ -0.44
HLA-DQB3-203ENST00000425319 SPECC1LQ69YQ0 1117 aa12.32□□□□□ -0.44
HLA-DQB3-203ENST00000425319 DNAJC24Q6P3W2 148 aa12.32□□□□□ -0.44
HLA-DQB3-203ENST00000425319 BORAQ6PGQ7 559 aa12.32□□□□□ -0.44
HLA-DQB3-203ENST00000425319 WDR59Q6PJI9 974 aa12.32□□□□□ -0.44
HLA-DQB3-203ENST00000425319 SPRED1Q7Z699 444 aa12.32□□□□□ -0.44
HLA-DQB3-203ENST00000425319 ZFAND4Q86XD8 727 aa12.32□□□□□ -0.44
HLA-DQB3-203ENST00000425319 CCDC185Q8N715 623 aa12.32□□□□□ -0.44
HLA-DQB3-203ENST00000425319 C3orf20Q8ND61 904 aa12.32□□□□□ -0.44
HLA-DQB3-203ENST00000425319 AGBL5Q8NDL9 886 aa12.32□□□□□ -0.44
HLA-DQB3-203ENST00000425319 ZDHHC1Q8WTX9 485 aa12.32□□□□□ -0.44
HLA-DQB3-203ENST00000425319 EXOC2Q96KP1 924 aa12.32□□□□□ -0.44
HLA-DQB3-203ENST00000425319 CDH19Q9H159 772 aa12.32□□□□□ -0.44
HLA-DQB3-203ENST00000425319 STN1Q9H668 368 aaKnown RBP12.32□□□□□ -0.44
HLA-DQB3-203ENST00000425319 SP110Q9HB58 689 aa12.32□□□□□ -0.44
HLA-DQB3-203ENST00000425319 RABGEF1Q9UJ41 708 aa12.32□□□□□ -0.44
HLA-DQB3-203ENST00000425319 AJAP1Q9UKB5 411 aaPredicted RBP12.32□□□□□ -0.44
HLA-DQB3-203ENST00000425319 PCDHGA4Q9Y5G9 962 aa12.32□□□□□ -0.44
HLA-DQB3-203ENST00000425319 PTPRQQ9UMZ3 2332 aa12.31□□□□□ -0.44
HLA-DQB3-203ENST00000425319 TSPAN11A1L157 253 aa12.31□□□□□ -0.44
HLA-DQB3-203ENST00000425319 PMS2P1A4D2B8 440 aa12.31□□□□□ -0.44
HLA-DQB3-203ENST00000425319 AGRPO00253 132 aa12.31□□□□□ -0.44
HLA-DQB3-203ENST00000425319 RNF8O76064 485 aa12.31□□□□□ -0.44
HLA-DQB3-203ENST00000425319 CELA2BP08218 269 aaPredicted RBP12.31□□□□□ -0.44
HLA-DQB3-203ENST00000425319 FAM87AP0C7U9 286 aa12.31□□□□□ -0.44
HLA-DQB3-203ENST00000425319 CYP2A6P11509 494 aaPredicted RBP12.31□□□□□ -0.44
HLA-DQB3-203ENST00000425319 ZNF135P52742 658 aaPredicted RBP12.31□□□□□ -0.44
HLA-DQB3-203ENST00000425319 ZNF143P52747 638 aaPredicted RBP12.31□□□□□ -0.44
HLA-DQB3-203ENST00000425319 HDAC4P56524 1084 aa12.31□□□□□ -0.44
HLA-DQB3-203ENST00000425319 SEPT6Q14141 434 aa12.31□□□□□ -0.44
HLA-DQB3-203ENST00000425319 HLTFQ14527 1009 aaKnown RBP eCLIP12.31□□□□□ -0.44
HLA-DQB3-203ENST00000425319 HSP90AA4PQ58FG1 418 aa12.31□□□□□ -0.44
HLA-DQB3-203ENST00000425319 TCP11X2Q5H9J9 407 aa12.31□□□□□ -0.44
HLA-DQB3-203ENST00000425319 TRNP1Q6NT89 227 aa12.31□□□□□ -0.44
HLA-DQB3-203ENST00000425319 PNCKQ6P2M8 343 aa12.31□□□□□ -0.44
HLA-DQB3-203ENST00000425319 CAMK1DQ8IU85 385 aa12.31□□□□□ -0.44
HLA-DQB3-203ENST00000425319 NEK11Q8NG66 645 aa12.31□□□□□ -0.44
HLA-DQB3-203ENST00000425319 JOSD2Q8TAC2 188 aa12.31□□□□□ -0.44
HLA-DQB3-203ENST00000425319 CNPY3Q9BT09 278 aa12.31□□□□□ -0.44
HLA-DQB3-203ENST00000425319 NAA15Q9BXJ9 866 aaKnown RBP12.31□□□□□ -0.44
HLA-DQB3-203ENST00000425319 TRIM4Q9C037 500 aa12.31□□□□□ -0.44
HLA-DQB3-203ENST00000425319 TMEM168Q9H0V1 697 aa12.31□□□□□ -0.44
HLA-DQB3-203ENST00000425319 CARS2Q9HA77 564 aaKnown RBP12.31□□□□□ -0.44
HLA-DQB3-203ENST00000425319 HAUS2Q9NVX0 235 aa12.31□□□□□ -0.44
HLA-DQB3-203ENST00000425319 TRNAU1APQ9NX07 287 aaKnown RBP12.31□□□□□ -0.44
HLA-DQB3-203ENST00000425319 FZD10Q9ULW2 581 aa12.31□□□□□ -0.44
HLA-DQB3-203ENST00000425319 ARID1BQ8NFD5 2236 aaPredicted RBP12.31□□□□□ -0.44
HLA-DQB3-203ENST00000425319 WDFY3Q8IZQ1 3526 aa12.31□□□□□ -0.44
HLA-DQB3-203ENST00000425319 TP53BP1Q12888 1972 aaPredicted RBP12.3□□□□□ -0.44
HLA-DQB3-203ENST00000425319 TRPM6Q9BX84 2022 aa12.3□□□□□ -0.44
HLA-DQB3-203ENST00000425319 PRSS38A1L453 326 aa12.3□□□□□ -0.44
HLA-DQB3-203ENST00000425319 GOLGA6CA6NDK9 693 aa12.3□□□□□ -0.44
HLA-DQB3-203ENST00000425319 GOLGA6BA6NDN3 693 aa12.3□□□□□ -0.44
HLA-DQB3-203ENST00000425319 EEF2KO00418 725 aaKnown RBP12.3□□□□□ -0.44
HLA-DQB3-203ENST00000425319 INSIG1O15503 277 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms