RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 CHRNA4P43681 627 aa10.38□□□□□ -0.75
MDC1-205ENST00000425072 ZP2Q05996 745 aa10.38□□□□□ -0.75
MDC1-205ENST00000425072 MESP2Q0VG99 397 aa10.38□□□□□ -0.75
MDC1-205ENST00000425072 ILF2Q12905 390 aaKnown RBP10.38□□□□□ -0.75
MDC1-205ENST00000425072 MSLNQ13421 630 aaPredicted RBP10.38□□□□□ -0.75
MDC1-205ENST00000425072 OLIG2Q13516 323 aa10.38□□□□□ -0.75
MDC1-205ENST00000425072 GALNT3Q14435 633 aa10.38□□□□□ -0.75
MDC1-205ENST00000425072 POU6F1Q14863 301 aa10.38□□□□□ -0.75
MDC1-205ENST00000425072 MLF2Q15773 248 aaPredicted RBP10.38□□□□□ -0.75
MDC1-205ENST00000425072 QPCTQ16769 361 aa10.38□□□□□ -0.75
MDC1-205ENST00000425072 UGP2Q16851 508 aa10.38□□□□□ -0.75
MDC1-205ENST00000425072 EOGTQ5NDL2 527 aa10.38□□□□□ -0.75
MDC1-205ENST00000425072 STEAP4Q687X5 459 aa10.38□□□□□ -0.75
MDC1-205ENST00000425072 UNC5AQ6ZN44 842 aa10.38□□□□□ -0.75
MDC1-205ENST00000425072 TPRG1Q6ZUI0 275 aa10.38□□□□□ -0.75
MDC1-205ENST00000425072 USP45Q70EL2 814 aa10.38□□□□□ -0.75
MDC1-205ENST00000425072 ALYREFQ86V81 257 aaKnown RBP10.38□□□□□ -0.75
MDC1-205ENST00000425072 IGDCC3Q8IVU1 814 aa10.38□□□□□ -0.75
MDC1-205ENST00000425072 STK40Q8N2I9 435 aa10.38□□□□□ -0.75
MDC1-205ENST00000425072 CHST14Q8NCH0 376 aa10.38□□□□□ -0.75
MDC1-205ENST00000425072 LPCAT1Q8NF37 534 aa10.38□□□□□ -0.75
MDC1-205ENST00000425072 BLOC1S5Q8TDH9 187 aa10.38□□□□□ -0.75
MDC1-205ENST00000425072 ECHDC3Q96DC8 303 aa10.38□□□□□ -0.75
MDC1-205ENST00000425072 FAM129BQ96TA1 746 aa10.38□□□□□ -0.75
MDC1-205ENST00000425072 TMEM109Q9BVC6 243 aa10.38□□□□□ -0.75
MDC1-205ENST00000425072 GPR63Q9BZJ6 419 aa10.38□□□□□ -0.75
MDC1-205ENST00000425072 PRSS16Q9NQE7 514 aa10.38□□□□□ -0.75
MDC1-205ENST00000425072 PIH1D1Q9NWS0 290 aaKnown RBP10.38□□□□□ -0.75
MDC1-205ENST00000425072 NSMCE4AQ9NXX6 385 aa10.38□□□□□ -0.75
MDC1-205ENST00000425072 MOCS1Q9NZB8 636 aa10.38□□□□□ -0.75
MDC1-205ENST00000425072 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.38□□□□□ -0.75
MDC1-205ENST00000425072 SLC24A2Q9UI40 661 aa10.38□□□□□ -0.75
MDC1-205ENST00000425072 RABGEF1Q9UJ41 708 aa10.38□□□□□ -0.75
MDC1-205ENST00000425072 PLAAQ9Y263 795 aa10.38□□□□□ -0.75
MDC1-205ENST00000425072 PKP3Q9Y446 797 aa10.38□□□□□ -0.75
MDC1-205ENST00000425072 IKBKGQ9Y6K9 419 aa10.38□□□□□ -0.75
MDC1-205ENST00000425072 KIAA1549LQ6ZVL6 1849 aa10.37□□□□□ -0.75
MDC1-205ENST00000425072 ATG2BQ96BY7 2078 aa10.37□□□□□ -0.75
MDC1-205ENST00000425072 MROH6A6NGR9 719 aa10.37□□□□□ -0.75
MDC1-205ENST00000425072 KPNA3O00505 521 aaPredicted RBP10.37□□□□□ -0.75
MDC1-205ENST00000425072 RASGRF2O14827 1237 aa10.37□□□□□ -0.75
MDC1-205ENST00000425072 STX7O15400 261 aaKnown RBP10.37□□□□□ -0.75
MDC1-205ENST00000425072 NARSO43776 548 aaKnown RBP10.37□□□□□ -0.75
MDC1-205ENST00000425072 SIN3BO75182 1162 aa10.37□□□□□ -0.75
MDC1-205ENST00000425072 GJB3O75712 270 aa10.37□□□□□ -0.75
MDC1-205ENST00000425072 EGFP01133 1207 aa10.37□□□□□ -0.75
MDC1-205ENST00000425072 IL1BP01584 269 aa10.37□□□□□ -0.75
MDC1-205ENST00000425072 HLA-EP13747 358 aa10.37□□□□□ -0.75
MDC1-205ENST00000425072 GKP32189 559 aa10.37□□□□□ -0.75
MDC1-205ENST00000425072 HMGCLP35914 325 aa10.37□□□□□ -0.75
MDC1-205ENST00000425072 ABL2P42684 1182 aa10.37□□□□□ -0.75
MDC1-205ENST00000425072 GPX6P59796 221 aa10.37□□□□□ -0.75
MDC1-205ENST00000425072 CRADDP78560 199 aa10.37□□□□□ -0.75
MDC1-205ENST00000425072 MGAT5Q09328 741 aa10.37□□□□□ -0.75
MDC1-205ENST00000425072 MTM1Q13496 603 aa10.37□□□□□ -0.75
MDC1-205ENST00000425072 NAB1Q13506 487 aa10.37□□□□□ -0.75
MDC1-205ENST00000425072 CAMK2GQ13555 558 aaPredicted RBP10.37□□□□□ -0.75
MDC1-205ENST00000425072 SEPT6Q14141 434 aa10.37□□□□□ -0.75
MDC1-205ENST00000425072 LRRC32Q14392 662 aa10.37□□□□□ -0.75
MDC1-205ENST00000425072 FASTKD3Q14CZ7 662 aaKnown RBP10.37□□□□□ -0.75
MDC1-205ENST00000425072 UAP1Q16222 522 aaPredicted RBP10.37□□□□□ -0.75
MDC1-205ENST00000425072 LONRF1Q17RB8 773 aa10.37□□□□□ -0.75
MDC1-205ENST00000425072 C2orf27AQ580R0 203 aa10.37□□□□□ -0.75
MDC1-205ENST00000425072 HSP90B2PQ58FF3 399 aa10.37□□□□□ -0.75
MDC1-205ENST00000425072 TSTD2Q5T7W7 516 aa10.37□□□□□ -0.75
MDC1-205ENST00000425072 ZDHHC20Q5W0Z9 365 aa10.37□□□□□ -0.75
MDC1-205ENST00000425072 EGFLAMQ63HQ2 1017 aa10.37□□□□□ -0.75
MDC1-205ENST00000425072 PDPK2PQ6A1A2 396 aa10.37□□□□□ -0.75
MDC1-205ENST00000425072 FSTL4Q6MZW2 842 aa10.37□□□□□ -0.75
MDC1-205ENST00000425072 ERAP2Q6P179 960 aa10.37□□□□□ -0.75
MDC1-205ENST00000425072 FBXL19Q6PCT2 694 aa10.37□□□□□ -0.75
MDC1-205ENST00000425072 TXNDC11Q6PKC3 985 aa10.37□□□□□ -0.75
MDC1-205ENST00000425072 GLT6D1Q7Z4J2 308 aa10.37□□□□□ -0.75
MDC1-205ENST00000425072 MTERF4Q7Z6M4 381 aaKnown RBP10.37□□□□□ -0.75
MDC1-205ENST00000425072 LRRC6Q86X45 466 aa10.37□□□□□ -0.75
MDC1-205ENST00000425072 LMNTD2Q8IXW0 634 aa10.37□□□□□ -0.75
MDC1-205ENST00000425072 RAVER1Q8IY67 606 aaKnown RBP10.37□□□□□ -0.75
MDC1-205ENST00000425072 MPP5Q8N3R9 675 aa10.37□□□□□ -0.75
MDC1-205ENST00000425072 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.37□□□□□ -0.75
MDC1-205ENST00000425072 OR6K2Q8NGY2 324 aa10.37□□□□□ -0.75
MDC1-205ENST00000425072 PIP4K2CQ8TBX8 421 aa10.37□□□□□ -0.75
MDC1-205ENST00000425072 CALML6Q8TD86 181 aa10.37□□□□□ -0.75
MDC1-205ENST00000425072 FBF1Q8TES7 1133 aa10.37□□□□□ -0.75
MDC1-205ENST00000425072 RAB7BQ96AH8 199 aa10.37□□□□□ -0.75
MDC1-205ENST00000425072 NSMCE3Q96MG7 304 aa10.37□□□□□ -0.75
MDC1-205ENST00000425072 ZIM3Q96PE6 472 aa10.37□□□□□ -0.75
MDC1-205ENST00000425072 LYSMD1Q96S90 227 aa10.37□□□□□ -0.75
MDC1-205ENST00000425072 GABRG3Q99928 467 aa10.37□□□□□ -0.75
MDC1-205ENST00000425072 STMN4Q9H169 189 aaPredicted RBP10.37□□□□□ -0.75
MDC1-205ENST00000425072 ZFYVE1Q9HBF4 777 aa10.37□□□□□ -0.75
MDC1-205ENST00000425072 PPANQ9NQ55 473 aaKnown RBP10.37□□□□□ -0.75
MDC1-205ENST00000425072 RAD18Q9NS91 495 aa10.37□□□□□ -0.75
MDC1-205ENST00000425072 CACNA2D2Q9NY47 1150 aa10.37□□□□□ -0.75
MDC1-205ENST00000425072 VPS18Q9P253 973 aa10.37□□□□□ -0.75
MDC1-205ENST00000425072 FBXL21Q9UKT6 434 aa10.37□□□□□ -0.75
MDC1-205ENST00000425072 SCML1Q9UN30 329 aa10.37□□□□□ -0.75
MDC1-205ENST00000425072 WASF2Q9Y6W5 498 aa10.37□□□□□ -0.75
MDC1-205ENST00000425072 EXOC1LA0A1B0GW35 172 aa10.36□□□□□ -0.75
MDC1-205ENST00000425072 TCRBV9S1A1TA0A576 114 aa10.36□□□□□ -0.75
MDC1-205ENST00000425072 TLDC2A0PJX2 215 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms