RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 PCDH9Q9HC56 1237 aa18.55■□□□□ 0.56
HDAC6-205ENST00000423941 B4GALT6Q9UBX8 382 aa18.55■□□□□ 0.56
HDAC6-205ENST00000423941 DNPEPQ9ULA0 475 aa18.55■□□□□ 0.56
HDAC6-205ENST00000423941 TTC7AQ9ULT0 858 aaPredicted RBP18.55■□□□□ 0.56
HDAC6-205ENST00000423941 CHKBQ9Y259 395 aa18.55■□□□□ 0.56
HDAC6-205ENST00000423941 TTLL3Q9Y4R7 772 aa18.55■□□□□ 0.56
HDAC6-205ENST00000423941 TMEM131Q92545 1883 aa18.54■□□□□ 0.56
HDAC6-205ENST00000423941 A0A0J9YYE9 177 aa18.54■□□□□ 0.56
HDAC6-205ENST00000423941 NEMP1O14524 444 aa18.54■□□□□ 0.56
HDAC6-205ENST00000423941 RAD51BO15315 384 aa18.54■□□□□ 0.56
HDAC6-205ENST00000423941 LIASO43766 372 aa18.54■□□□□ 0.56
HDAC6-205ENST00000423941 KIF5CO60282 957 aa18.54■□□□□ 0.56
HDAC6-205ENST00000423941 TM7SF2O76062 418 aa18.54■□□□□ 0.56
HDAC6-205ENST00000423941 EPOP01588 193 aa18.54■□□□□ 0.56
HDAC6-205ENST00000423941 TRBC1P01850 177 aa18.54■□□□□ 0.56
HDAC6-205ENST00000423941 PRKCGP05129 697 aa18.54■□□□□ 0.56
HDAC6-205ENST00000423941 CFIP05156 583 aa18.54■□□□□ 0.56
HDAC6-205ENST00000423941 PRLRP16471 622 aa18.54■□□□□ 0.56
HDAC6-205ENST00000423941 ENGP17813 658 aa18.54■□□□□ 0.56
HDAC6-205ENST00000423941 NFKB1P19838 968 aa18.54■□□□□ 0.56
HDAC6-205ENST00000423941 CA4P22748 312 aa18.54■□□□□ 0.56
HDAC6-205ENST00000423941 LIG3P49916 1009 aa18.54■□□□□ 0.56
HDAC6-205ENST00000423941 LMNB2Q03252 620 aa18.54■□□□□ 0.56
HDAC6-205ENST00000423941 CCNG2Q16589 344 aa18.54■□□□□ 0.56
HDAC6-205ENST00000423941 ANKRD20A2Q5SQ80 823 aa18.54■□□□□ 0.56
HDAC6-205ENST00000423941 ANKRD20A1Q5TYW2 823 aa18.54■□□□□ 0.56
HDAC6-205ENST00000423941 ANKRD20A3Q5VUR7 823 aa18.54■□□□□ 0.56
HDAC6-205ENST00000423941 KDELC1Q6UW63 502 aa18.54■□□□□ 0.56
HDAC6-205ENST00000423941 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.54■□□□□ 0.56
HDAC6-205ENST00000423941 C12orf50Q8NA57 414 aaPredicted RBP18.54■□□□□ 0.56
HDAC6-205ENST00000423941 DENND6BQ8NEG7 585 aa18.54■□□□□ 0.56
HDAC6-205ENST00000423941 FAM174AQ8TBP5 190 aa18.54■□□□□ 0.56
HDAC6-205ENST00000423941 CXorf40AQ8TE69 158 aa18.54■□□□□ 0.56
HDAC6-205ENST00000423941 PDCD6IPQ8WUM4 868 aaKnown RBP18.54■□□□□ 0.56
HDAC6-205ENST00000423941 PBKQ96KB5 322 aa18.54■□□□□ 0.56
HDAC6-205ENST00000423941 GORASP1Q9BQQ3 440 aa18.54■□□□□ 0.56
HDAC6-205ENST00000423941 GPR27Q9NS67 375 aa18.54■□□□□ 0.56
HDAC6-205ENST00000423941 ZKSCAN5Q9Y2L8 839 aa18.54■□□□□ 0.56
HDAC6-205ENST00000423941 LOC285095A0A1B0GVY8 99 aa18.53■□□□□ 0.56
HDAC6-205ENST00000423941 NPIPB15A6NHN6 443 aaPredicted RBP18.53■□□□□ 0.56
HDAC6-205ENST00000423941 ANKRD66B4E2M5 251 aa18.53■□□□□ 0.56
HDAC6-205ENST00000423941 KCNN4O15554 427 aa18.53■□□□□ 0.56
HDAC6-205ENST00000423941 GDF9O60383 454 aa18.53■□□□□ 0.56
HDAC6-205ENST00000423941 GCATO75600 419 aa18.53■□□□□ 0.56
HDAC6-205ENST00000423941 MT-CYBP00156 380 aaPredicted RBP18.53■□□□□ 0.56
HDAC6-205ENST00000423941 ATP1A1P05023 1023 aaKnown RBP18.53■□□□□ 0.56
HDAC6-205ENST00000423941 SYPP08247 313 aa18.53■□□□□ 0.56
HDAC6-205ENST00000423941 C6P13671 934 aa18.53■□□□□ 0.56
HDAC6-205ENST00000423941 MSNP26038 577 aaKnown RBP18.53■□□□□ 0.56
HDAC6-205ENST00000423941 AKT2P31751 481 aa18.53■□□□□ 0.56
HDAC6-205ENST00000423941 STIP1P31948 543 aaKnown RBP18.53■□□□□ 0.56
HDAC6-205ENST00000423941 VIPR1P32241 457 aa18.53■□□□□ 0.56
HDAC6-205ENST00000423941 CXCR5P32302 372 aa18.53■□□□□ 0.56
HDAC6-205ENST00000423941 HNF1BP35680 557 aa18.53■□□□□ 0.56
HDAC6-205ENST00000423941 FAM193AP78312 1265 aa18.53■□□□□ 0.56
HDAC6-205ENST00000423941 GRIK2Q13002 908 aa18.53■□□□□ 0.56
HDAC6-205ENST00000423941 SGCGQ13326 291 aa18.53■□□□□ 0.56
HDAC6-205ENST00000423941 PTPRRQ15256 657 aa18.53■□□□□ 0.56
HDAC6-205ENST00000423941 TEAD4Q15561 434 aa18.53■□□□□ 0.56
HDAC6-205ENST00000423941 CDKN3Q16667 212 aa18.53■□□□□ 0.56
HDAC6-205ENST00000423941 GCNT7Q6ZNI0 430 aa18.53■□□□□ 0.56
HDAC6-205ENST00000423941 TP53I13Q8NBR0 393 aaPredicted RBP18.53■□□□□ 0.56
HDAC6-205ENST00000423941 OXNAD1Q96HP4 312 aaPredicted RBP18.53■□□□□ 0.56
HDAC6-205ENST00000423941 COQ10AQ96MF6 247 aa18.53■□□□□ 0.56
HDAC6-205ENST00000423941 SPATA13Q96N96 652 aa18.53■□□□□ 0.56
HDAC6-205ENST00000423941 FERMT1Q9BQL6 677 aa18.53■□□□□ 0.56
HDAC6-205ENST00000423941 WRAP53Q9BUR4 548 aaKnown RBP18.53■□□□□ 0.56
HDAC6-205ENST00000423941 GBA3Q9H227 469 aa18.53■□□□□ 0.56
HDAC6-205ENST00000423941 FSCN3Q9NQT6 498 aa18.53■□□□□ 0.56
HDAC6-205ENST00000423941 KLHL8Q9P2G9 620 aaPredicted RBP18.53■□□□□ 0.56
HDAC6-205ENST00000423941 FAM153AQ9UHL3 310 aa18.53■□□□□ 0.56
HDAC6-205ENST00000423941 ANKRD6Q9Y2G4 727 aa18.53■□□□□ 0.56
HDAC6-205ENST00000423941 KNL1Q8NG31 2342 aa18.52■□□□□ 0.56
HDAC6-205ENST00000423941 A0A1B0GVT2 93 aa18.52■□□□□ 0.56
HDAC6-205ENST00000423941 TLR4O00206 839 aa18.52■□□□□ 0.56
HDAC6-205ENST00000423941 PSMD11O00231 422 aa18.52■□□□□ 0.56
HDAC6-205ENST00000423941 CES2O00748 559 aa18.52■□□□□ 0.56
HDAC6-205ENST00000423941 CEP104O60308 925 aa18.52■□□□□ 0.56
HDAC6-205ENST00000423941 OPHN1O60890 802 aa18.52■□□□□ 0.56
HDAC6-205ENST00000423941 HEXIM1O94992 359 aaKnown RBP18.52■□□□□ 0.56
HDAC6-205ENST00000423941 FGGP02679 453 aa18.52■□□□□ 0.56
HDAC6-205ENST00000423941 LHCGRP22888 699 aa18.52■□□□□ 0.56
HDAC6-205ENST00000423941 NFKBIAP25963 317 aa18.52■□□□□ 0.56
HDAC6-205ENST00000423941 CTSKP43235 329 aa18.52■□□□□ 0.56
HDAC6-205ENST00000423941 ARHGAP8P85298 464 aa18.52■□□□□ 0.56
HDAC6-205ENST00000423941 SEMG2Q02383 582 aa18.52■□□□□ 0.56
HDAC6-205ENST00000423941 CDK18Q07002 472 aa18.52■□□□□ 0.56
HDAC6-205ENST00000423941 STAT4Q14765 748 aa18.52■□□□□ 0.56
HDAC6-205ENST00000423941 CNGA3Q16281 694 aa18.52■□□□□ 0.56
HDAC6-205ENST00000423941 QPCTQ16769 361 aa18.52■□□□□ 0.56
HDAC6-205ENST00000423941 CRTC1Q6UUV9 634 aa18.52■□□□□ 0.56
HDAC6-205ENST00000423941 RAVER1Q8IY67 606 aaKnown RBP18.52■□□□□ 0.56
HDAC6-205ENST00000423941 NDUFAF2Q8N183 169 aa18.52■□□□□ 0.56
HDAC6-205ENST00000423941 MAIP1Q8WWC4 291 aa18.52■□□□□ 0.56
HDAC6-205ENST00000423941 ATG4AQ8WYN0 398 aa18.52■□□□□ 0.56
HDAC6-205ENST00000423941 SMIM14Q96QK8 99 aa18.52■□□□□ 0.56
HDAC6-205ENST00000423941 SNX12Q9UMY4 172 aa18.52■□□□□ 0.56
HDAC6-205ENST00000423941 DRG1Q9Y295 367 aaKnown RBP18.52■□□□□ 0.56
HDAC6-205ENST00000423941 POM121BA6NF01 834 aa18.51■□□□□ 0.55
HDAC6-205ENST00000423941 CAPN8A6NHC0 703 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms