RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 CCDC50Q8IVM0 306 aa26.53■■□□□ 1.84
CDK9-202ENST00000421939 RCOR2Q8IZ40 523 aa26.53■■□□□ 1.84
CDK9-202ENST00000421939 TXLNBQ8N3L3 684 aa26.53■■□□□ 1.84
CDK9-202ENST00000421939 EXD1Q8NHP7 514 aa26.53■■□□□ 1.84
CDK9-202ENST00000421939 IL12RB2Q99665 862 aa26.53■■□□□ 1.84
CDK9-202ENST00000421939 MBNL1Q9NR56 388 aaKnown RBP26.53■■□□□ 1.84
CDK9-202ENST00000421939 PHTF1Q9UMS5 762 aa26.53■■□□□ 1.84
CDK9-202ENST00000421939 CEP295Q9C0D2 2601 aa26.52■■□□□ 1.84
CDK9-202ENST00000421939 SPTY2D1-AS1A0A0U1RR47 76 aa26.52■■□□□ 1.84
CDK9-202ENST00000421939 CST8O60676 142 aa26.52■■□□□ 1.84
CDK9-202ENST00000421939 JCHAINP01591 159 aa26.52■■□□□ 1.84
CDK9-202ENST00000421939 FTH1P19P0C7X4 201 aa26.52■■□□□ 1.84
CDK9-202ENST00000421939 NFKBIAP25963 317 aa26.52■■□□□ 1.84
CDK9-202ENST00000421939 CTNNA1P35221 906 aaKnown RBP26.52■■□□□ 1.84
CDK9-202ENST00000421939 ZBTB17Q13105 803 aa26.52■■□□□ 1.84
CDK9-202ENST00000421939 FZD2Q14332 565 aa26.52■■□□□ 1.84
CDK9-202ENST00000421939 LLGL1Q15334 1064 aa26.52■■□□□ 1.84
CDK9-202ENST00000421939 WSCD2Q2TBF2 565 aa26.52■■□□□ 1.84
CDK9-202ENST00000421939 LIPIQ6XZB0 460 aa26.52■■□□□ 1.84
CDK9-202ENST00000421939 PARGQ86W56 976 aa26.52■■□□□ 1.84
CDK9-202ENST00000421939 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP26.52■■□□□ 1.84
CDK9-202ENST00000421939 BRD8Q9H0E9 1235 aa26.52■■□□□ 1.84
CDK9-202ENST00000421939 FTSJ1Q9UET6 329 aa26.52■■□□□ 1.84
CDK9-202ENST00000421939 ANGPTL2Q9UKU9 493 aa26.52■■□□□ 1.84
CDK9-202ENST00000421939 COL5A1P20908 1838 aaPredicted RBP26.51■■□□□ 1.83
CDK9-202ENST00000421939 hCG_1818297A0A087WSY0 165 aa26.51■■□□□ 1.83
CDK9-202ENST00000421939 TOR1BO14657 336 aa26.51■■□□□ 1.83
CDK9-202ENST00000421939 TGM2P21980 687 aa26.51■■□□□ 1.83
CDK9-202ENST00000421939 VIPR1P32241 457 aa26.51■■□□□ 1.83
CDK9-202ENST00000421939 NR2C2P49116 596 aa26.51■■□□□ 1.83
CDK9-202ENST00000421939 YPEL5P62699 121 aa26.51■■□□□ 1.83
CDK9-202ENST00000421939 SHC2P98077 582 aa26.51■■□□□ 1.83
CDK9-202ENST00000421939 TPRG1LQ5T0D9 272 aa26.51■■□□□ 1.83
CDK9-202ENST00000421939 BZW1Q7L1Q6 419 aaKnown RBP26.51■■□□□ 1.83
CDK9-202ENST00000421939 ARRDC2Q8TBH0 407 aa26.51■■□□□ 1.83
CDK9-202ENST00000421939 KIAA1524Q8TCG1 905 aa26.51■■□□□ 1.83
CDK9-202ENST00000421939 DNAJC28Q9NX36 388 aa26.51■■□□□ 1.83
CDK9-202ENST00000421939 GRID2IPA4D2P6 1211 aa26.5■■□□□ 1.83
CDK9-202ENST00000421939 A8MX80 341 aa26.5■■□□□ 1.83
CDK9-202ENST00000421939 RECQL5O94762 991 aaPredicted RBP26.5■■□□□ 1.83
CDK9-202ENST00000421939 CYP2A6P11509 494 aaPredicted RBP26.5■■□□□ 1.83
CDK9-202ENST00000421939 PECAM1P16284 738 aaPredicted RBP26.5■■□□□ 1.83
CDK9-202ENST00000421939 CA4P22748 312 aa26.5■■□□□ 1.83
CDK9-202ENST00000421939 THOP1P52888 689 aa26.5■■□□□ 1.83
CDK9-202ENST00000421939 NIPAL4Q0D2K0 466 aa26.5■■□□□ 1.83
CDK9-202ENST00000421939 KIF5AQ12840 1032 aa26.5■■□□□ 1.83
CDK9-202ENST00000421939 IHHQ14623 411 aa26.5■■□□□ 1.83
CDK9-202ENST00000421939 CNGA3Q16281 694 aa26.5■■□□□ 1.83
CDK9-202ENST00000421939 PPP2R5EQ16537 467 aa26.5■■□□□ 1.83
CDK9-202ENST00000421939 USP45Q70EL2 814 aa26.5■■□□□ 1.83
CDK9-202ENST00000421939 EID2Q8N6I1 236 aa26.5■■□□□ 1.83
CDK9-202ENST00000421939 LRRC57Q8N9N7 239 aa26.5■■□□□ 1.83
CDK9-202ENST00000421939 MCCC1Q96RQ3 725 aaPredicted RBP26.5■■□□□ 1.83
CDK9-202ENST00000421939 TDRD1Q9BXT4 1180 aaKnown RBP26.5■■□□□ 1.83
CDK9-202ENST00000421939 TRIM10Q9UDY6 481 aa26.5■■□□□ 1.83
CDK9-202ENST00000421939 APOBEC2Q9Y235 224 aaKnown RBP26.5■■□□□ 1.83
CDK9-202ENST00000421939 PCDHA3Q9Y5H8 950 aa26.5■■□□□ 1.83
CDK9-202ENST00000421939 SPEGQ15772 3267 aa26.49■■□□□ 1.83
CDK9-202ENST00000421939 TNFSF14O43557 240 aa26.49■■□□□ 1.83
CDK9-202ENST00000421939 FZD6O60353 706 aa26.49■■□□□ 1.83
CDK9-202ENST00000421939 PIAS2O75928 621 aa26.49■■□□□ 1.83
CDK9-202ENST00000421939 TRIM16O95361 564 aa26.49■■□□□ 1.83
CDK9-202ENST00000421939 ADCY2Q08462 1091 aa26.49■■□□□ 1.83
CDK9-202ENST00000421939 PTK2BQ14289 1009 aa26.49■■□□□ 1.83
CDK9-202ENST00000421939 ZNF542PQ5EBM4 170 aa26.49■■□□□ 1.83
CDK9-202ENST00000421939 CNTD1Q8N815 330 aa26.49■■□□□ 1.83
CDK9-202ENST00000421939 PIH1D2Q8WWB5 315 aa26.49■■□□□ 1.83
CDK9-202ENST00000421939 SCRN2Q96FV2 425 aa26.49■■□□□ 1.83
CDK9-202ENST00000421939 CEP41Q9BYV8 373 aa26.49■■□□□ 1.83
CDK9-202ENST00000421939 SEPT10Q9P0V9 454 aa26.49■■□□□ 1.83
CDK9-202ENST00000421939 SAE1Q9UBE0 346 aaPredicted RBP26.49■■□□□ 1.83
CDK9-202ENST00000421939 MACROD2A1Z1Q3 448 aa26.48■■□□□ 1.83
CDK9-202ENST00000421939 CCDC66A2RUB6 948 aa26.48■■□□□ 1.83
CDK9-202ENST00000421939 NPIPB15A6NHN6 443 aaPredicted RBP26.48■■□□□ 1.83
CDK9-202ENST00000421939 HEXIM1O94992 359 aaKnown RBP26.48■■□□□ 1.83
CDK9-202ENST00000421939 CSF2P04141 144 aa26.48■■□□□ 1.83
CDK9-202ENST00000421939 PCCBP05166 539 aa26.48■■□□□ 1.83
CDK9-202ENST00000421939 PDHA1P08559 390 aa26.48■■□□□ 1.83
CDK9-202ENST00000421939 NME1P15531 152 aaKnown RBP26.48■■□□□ 1.83
CDK9-202ENST00000421939 GM2AP17900 193 aa26.48■■□□□ 1.83
CDK9-202ENST00000421939 DGKAP23743 735 aa26.48■■□□□ 1.83
CDK9-202ENST00000421939 CTNNA2P26232 953 aa26.48■■□□□ 1.83
CDK9-202ENST00000421939 HNRNPKP61978 463 aaKnown RBP eCLIP26.48■■□□□ 1.83
CDK9-202ENST00000421939 ACOX1Q15067 660 aa26.48■■□□□ 1.83
CDK9-202ENST00000421939 PRKD1Q15139 912 aaPredicted RBP26.48■■□□□ 1.83
CDK9-202ENST00000421939 MACC1Q6ZN28 852 aa26.48■■□□□ 1.83
CDK9-202ENST00000421939 CAAP1Q9H8G2 361 aa26.48■■□□□ 1.83
CDK9-202ENST00000421939 UCKL1Q9NWZ5 548 aa26.48■■□□□ 1.83
CDK9-202ENST00000421939 TOR4AQ9NXH8 423 aa26.48■■□□□ 1.83
CDK9-202ENST00000421939 WASF3Q9UPY6 502 aa26.48■■□□□ 1.83
CDK9-202ENST00000421939 PPIL1Q9Y3C6 166 aa26.48■■□□□ 1.83
CDK9-202ENST00000421939 CHD8Q9HCK8 2581 aa26.47■■□□□ 1.83
CDK9-202ENST00000421939 A0A0U1RQJ8 604 aa26.47■■□□□ 1.83
CDK9-202ENST00000421939 H3BM21 787 aa26.47■■□□□ 1.83
CDK9-202ENST00000421939 ATXN1LP0C7T5 689 aaKnown RBP26.47■■□□□ 1.83
CDK9-202ENST00000421939 CTPS1P17812 591 aa26.47■■□□□ 1.83
CDK9-202ENST00000421939 LHCGRP22888 699 aa26.47■■□□□ 1.83
CDK9-202ENST00000421939 CD86P42081 329 aa26.47■■□□□ 1.83
CDK9-202ENST00000421939 COPS2P61201 443 aa26.47■■□□□ 1.83
CDK9-202ENST00000421939 EIF2B5Q13144 721 aaKnown RBP26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms