RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 KCNK3O14649 394 aa18.74■□□□□ 0.59
PTCD3-204ENST00000418628 RAD51BO15315 384 aa18.74■□□□□ 0.59
PTCD3-204ENST00000418628 ZNF189O75820 626 aaPredicted RBP18.74■□□□□ 0.59
PTCD3-204ENST00000418628 NEBLO76041 1014 aa18.74■□□□□ 0.59
PTCD3-204ENST00000418628 TRBC1P01850 177 aa18.74■□□□□ 0.59
PTCD3-204ENST00000418628 C6P13671 934 aa18.74■□□□□ 0.59
PTCD3-204ENST00000418628 NFKB1P19838 968 aa18.74■□□□□ 0.59
PTCD3-204ENST00000418628 LHCGRP22888 699 aa18.74■□□□□ 0.59
PTCD3-204ENST00000418628 CD38P28907 300 aa18.74■□□□□ 0.59
PTCD3-204ENST00000418628 CTSKP43235 329 aa18.74■□□□□ 0.59
PTCD3-204ENST00000418628 ATP5OP48047 213 aa18.74■□□□□ 0.59
PTCD3-204ENST00000418628 CSNK1EP49674 416 aaKnown RBP18.74■□□□□ 0.59
PTCD3-204ENST00000418628 CCDC181Q5TID7 509 aa18.74■□□□□ 0.59
PTCD3-204ENST00000418628 LIPIQ6XZB0 460 aa18.74■□□□□ 0.59
PTCD3-204ENST00000418628 KLHDC8BQ8IXV7 354 aa18.74■□□□□ 0.59
PTCD3-204ENST00000418628 MFSD2AQ8NA29 543 aa18.74■□□□□ 0.59
PTCD3-204ENST00000418628 CXorf40AQ8TE69 158 aa18.74■□□□□ 0.59
PTCD3-204ENST00000418628 KLK6Q92876 244 aa18.74■□□□□ 0.59
PTCD3-204ENST00000418628 CENPTQ96BT3 561 aa18.74■□□□□ 0.59
PTCD3-204ENST00000418628 SCRN2Q96FV2 425 aa18.74■□□□□ 0.59
PTCD3-204ENST00000418628 FCRL5Q96RD9 977 aa18.74■□□□□ 0.59
PTCD3-204ENST00000418628 LYSMD1Q96S90 227 aa18.74■□□□□ 0.59
PTCD3-204ENST00000418628 ZDHHC5Q9C0B5 715 aa18.74■□□□□ 0.59
PTCD3-204ENST00000418628 C10orf88Q9H8K7 445 aa18.74■□□□□ 0.59
PTCD3-204ENST00000418628 FZD3Q9NPG1 666 aa18.74■□□□□ 0.59
PTCD3-204ENST00000418628 TRHDEQ9UKU6 1024 aa18.74■□□□□ 0.59
PTCD3-204ENST00000418628 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.74■□□□□ 0.59
PTCD3-204ENST00000418628 A0A1B0GVT2 93 aa18.73■□□□□ 0.59
PTCD3-204ENST00000418628 NPIPB15A6NHN6 443 aaPredicted RBP18.73■□□□□ 0.59
PTCD3-204ENST00000418628 NEMP1O14524 444 aa18.73■□□□□ 0.59
PTCD3-204ENST00000418628 SLC31A1O15431 190 aa18.73■□□□□ 0.59
PTCD3-204ENST00000418628 MMP20O60882 483 aa18.73■□□□□ 0.59
PTCD3-204ENST00000418628 TM7SF2O76062 418 aa18.73■□□□□ 0.59
PTCD3-204ENST00000418628 CA4P22748 312 aa18.73■□□□□ 0.59
PTCD3-204ENST00000418628 XPAP23025 273 aaPredicted RBP18.73■□□□□ 0.59
PTCD3-204ENST00000418628 ARHGAP8P85298 464 aa18.73■□□□□ 0.59
PTCD3-204ENST00000418628 OVGP1Q12889 678 aa18.73■□□□□ 0.59
PTCD3-204ENST00000418628 OASLQ15646 514 aaKnown RBP18.73■□□□□ 0.59
PTCD3-204ENST00000418628 CNGA3Q16281 694 aa18.73■□□□□ 0.59
PTCD3-204ENST00000418628 AASDHQ4L235 1098 aaPredicted RBP18.73■□□□□ 0.59
PTCD3-204ENST00000418628 KDELC1Q6UW63 502 aa18.73■□□□□ 0.59
PTCD3-204ENST00000418628 KYAT3Q6YP21 454 aaKnown RBP18.73■□□□□ 0.59
PTCD3-204ENST00000418628 SLC35F6Q8N357 371 aa18.73■□□□□ 0.59
PTCD3-204ENST00000418628 TP53I13Q8NBR0 393 aaPredicted RBP18.73■□□□□ 0.59
PTCD3-204ENST00000418628 NETO1Q8TDF5 533 aa18.73■□□□□ 0.59
PTCD3-204ENST00000418628 PDCD6IPQ8WUM4 868 aaKnown RBP18.73■□□□□ 0.59
PTCD3-204ENST00000418628 RTP4Q96DX8 246 aa18.73■□□□□ 0.59
PTCD3-204ENST00000418628 RBM15Q96T37 977 aaKnown RBP eCLIP18.73■□□□□ 0.59
PTCD3-204ENST00000418628 WRAP53Q9BUR4 548 aaKnown RBP18.73■□□□□ 0.59
PTCD3-204ENST00000418628 FRMD8P1Q9BZ68 369 aaPredicted RBP18.73■□□□□ 0.59
PTCD3-204ENST00000418628 PCDH9Q9HC56 1237 aa18.73■□□□□ 0.59
PTCD3-204ENST00000418628 DNAAF2Q9NVR5 837 aaKnown RBP18.73■□□□□ 0.59
PTCD3-204ENST00000418628 TRMT1Q9NXH9 659 aaKnown RBP18.73■□□□□ 0.59
PTCD3-204ENST00000418628 DNPEPQ9ULA0 475 aa18.73■□□□□ 0.59
PTCD3-204ENST00000418628 CA5BQ9Y2D0 317 aa18.73■□□□□ 0.59
PTCD3-204ENST00000418628 HS3ST3A1Q9Y663 406 aa18.73■□□□□ 0.59
PTCD3-204ENST00000418628 CAPN8A6NHC0 703 aa18.72■□□□□ 0.59
PTCD3-204ENST00000418628 H0Y8X5 98 aa18.72■□□□□ 0.59
PTCD3-204ENST00000418628 PSMD11O00231 422 aa18.72■□□□□ 0.59
PTCD3-204ENST00000418628 HEXIM1O94992 359 aaKnown RBP18.72■□□□□ 0.59
PTCD3-204ENST00000418628 MT-CYBP00156 380 aaPredicted RBP18.72■□□□□ 0.59
PTCD3-204ENST00000418628 SYPP08247 313 aa18.72■□□□□ 0.59
PTCD3-204ENST00000418628 AKT2P31751 481 aa18.72■□□□□ 0.59
PTCD3-204ENST00000418628 VIPR1P32241 457 aa18.72■□□□□ 0.59
PTCD3-204ENST00000418628 IGFALSP35858 605 aa18.72■□□□□ 0.59
PTCD3-204ENST00000418628 LIG3P49916 1009 aa18.72■□□□□ 0.59
PTCD3-204ENST00000418628 SEMG2Q02383 582 aa18.72■□□□□ 0.59
PTCD3-204ENST00000418628 TEAD4Q15561 434 aa18.72■□□□□ 0.59
PTCD3-204ENST00000418628 ZNF423Q2M1K9 1284 aa18.72■□□□□ 0.59
PTCD3-204ENST00000418628 KIF19Q2TAC6 998 aa18.72■□□□□ 0.59
PTCD3-204ENST00000418628 RASGEF1CQ8N431 466 aa18.72■□□□□ 0.59
PTCD3-204ENST00000418628 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.72■□□□□ 0.59
PTCD3-204ENST00000418628 SPATA22Q8NHS9 363 aa18.72■□□□□ 0.59
PTCD3-204ENST00000418628 FAM174AQ8TBP5 190 aa18.72■□□□□ 0.59
PTCD3-204ENST00000418628 OXNAD1Q96HP4 312 aaPredicted RBP18.72■□□□□ 0.59
PTCD3-204ENST00000418628 SPATA13Q96N96 652 aa18.72■□□□□ 0.59
PTCD3-204ENST00000418628 SMIM14Q96QK8 99 aa18.72■□□□□ 0.59
PTCD3-204ENST00000418628 GBA3Q9H227 469 aa18.72■□□□□ 0.59
PTCD3-204ENST00000418628 KLHL8Q9P2G9 620 aaPredicted RBP18.72■□□□□ 0.59
PTCD3-204ENST00000418628 CHKBQ9Y259 395 aa18.72■□□□□ 0.59
PTCD3-204ENST00000418628 ANKRD6Q9Y2G4 727 aa18.72■□□□□ 0.59
PTCD3-204ENST00000418628 ENC1O14682 589 aa18.71■□□□□ 0.59
PTCD3-204ENST00000418628 KCNN4O15554 427 aa18.71■□□□□ 0.59
PTCD3-204ENST00000418628 LIASO43766 372 aa18.71■□□□□ 0.59
PTCD3-204ENST00000418628 PAK4O96013 591 aaPredicted RBP18.71■□□□□ 0.59
PTCD3-204ENST00000418628 ALPIP09923 528 aa18.71■□□□□ 0.59
PTCD3-204ENST00000418628 NXPH1P58417 271 aa18.71■□□□□ 0.59
PTCD3-204ENST00000418628 FAM193AP78312 1265 aa18.71■□□□□ 0.59
PTCD3-204ENST00000418628 CDKN3Q16667 212 aa18.71■□□□□ 0.59
PTCD3-204ENST00000418628 QPCTQ16769 361 aa18.71■□□□□ 0.59
PTCD3-204ENST00000418628 ZNF569Q5MCW4 686 aa18.71■□□□□ 0.59
PTCD3-204ENST00000418628 ANKRD20A2Q5SQ80 823 aa18.71■□□□□ 0.59
PTCD3-204ENST00000418628 ANKRD20A1Q5TYW2 823 aa18.71■□□□□ 0.59
PTCD3-204ENST00000418628 ANKRD20A3Q5VUR7 823 aa18.71■□□□□ 0.59
PTCD3-204ENST00000418628 DARS2Q6PI48 645 aaKnown RBP18.71■□□□□ 0.59
PTCD3-204ENST00000418628 USP45Q70EL2 814 aa18.71■□□□□ 0.59
PTCD3-204ENST00000418628 SPATS2Q86XZ4 545 aaKnown RBP18.71■□□□□ 0.59
PTCD3-204ENST00000418628 SLC22A18ASQ8N1D0 253 aa18.71■□□□□ 0.59
PTCD3-204ENST00000418628 MINDY1Q8N5J2 469 aa18.71■□□□□ 0.59
PTCD3-204ENST00000418628 ATG4AQ8WYN0 398 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms