RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 TRIM49CP0CI26 452 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 HARSP12081 509 aaKnown RBP4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 AKR1A1P14550 325 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 CREB1P16220 341 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 GLRA2P23416 452 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 IL1R2P27930 398 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 EPHA3P29320 983 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 PBX1P40424 430 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 PTDSS1P48651 473 aaKnown RBP4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 CASP4P49662 377 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 CPT1AP50416 773 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 BCAT1P54687 386 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 ZBED6P86452 979 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 GTF2BQ00403 316 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 TNFAIP2Q03169 654 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 BFSP1Q12934 665 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 PPFIA1Q13136 1202 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 ACVR2BQ13705 512 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 RAPGEF1Q13905 1077 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 MXD4Q14582 209 aaPredicted RBP4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 PLCB4Q15147 1175 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 ASIC2Q16515 512 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 MINDY4Q4G0A6 757 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 DUSP28Q4G0W2 176 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 TDRD12Q587J7 1177 aaKnown RBP4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 C3orf38Q5JPI3 329 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 ZNF484Q5JVG2 852 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 TMEM65Q6PI78 240 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 CYP26C1Q6V0L0 522 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 INTS8Q75QN2 995 aaKnown RBP4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 PLPPR4Q7Z2D5 763 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 BCDIN3DQ7Z5W3 292 aaKnown RBP4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 KIAA1328Q86T90 577 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 TLK2Q86UE8 772 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 RHPN2Q8IUC4 686 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 TMTC1Q8IUR5 882 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 SFTPA1Q8IWL2 248 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 C12orf56Q8IXR9 622 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 GPD1LQ8N335 351 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 METTL13Q8N6R0 699 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 XXYLT1Q8NBI6 393 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 OR8K1Q8NGG5 319 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 PPTC7Q8NI37 304 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 ADAMTS18Q8TE60 1221 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 AFG1LQ8WV93 481 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 POMGNT1Q8WZA1 660 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 CAPNS2Q96L46 248 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 C16orf45Q96MC5 204 aaPredicted RBP4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 HS6ST2Q96MM7 605 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 NLRP4Q96MN2 994 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 SPAG5Q96R06 1193 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 FIZ1Q96SL8 496 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 MAP7D2Q96T17 732 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 PCYT2Q99447 389 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 FAM118BQ9BPY3 351 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 KATNAL1Q9BW62 490 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 DHX33Q9H6R0 707 aaKnown RBP4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 XPNPEP1Q9NQW7 623 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 SNX15Q9NRS6 342 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 FAM207AQ9NSI2 230 aaPredicted RBP4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 TRNAU1APQ9NX07 287 aaKnown RBP4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 TRMT1Q9NXH9 659 aaKnown RBP4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 TUBA8Q9NY65 449 aaPredicted RBP4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 GCNT4Q9P109 453 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 CAPN11Q9UMQ6 739 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 TBX20Q9UMR3 447 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 PAXBP1Q9Y5B6 917 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 PDCD11Q14690 1871 aaKnown RBP4.03□□□□□ -1.77
HMGB3P20-201ENST00000417997 ADGRA3Q8IWK6 1321 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 TCRBV5S1A1TA0A578 114 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 TTC26A0AVF1 554 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 GTPBP10A4D1E9 387 aaKnown RBP4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 GOLGA8IPA6NC78 632 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 LRRC53A6NM62 1247 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 GOLGA8JA6NMD2 632 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 K7ERI5 159 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 RAB27BO00194 218 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 MAPK13O15264 365 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 MAGEB2O15479 319 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 MOSPD3O75425 235 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 PIAS2O75928 621 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 ERLIN2O94905 339 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 SNAI1O95863 264 aaPredicted RBP4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 TOP3BO95985 862 aaKnown RBP4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 LDHAP00338 332 aaKnown RBP4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 MYL3P08590 195 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 HOXC6P09630 235 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 TNNT1P13805 278 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 HGFP14210 728 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 KLRC1P26715 233 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 TMOD1P28289 359 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 UQCRC1P31930 480 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 HOXD13P35453 343 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 ARL2P36404 184 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 PSMC4P43686 418 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 TM4SF4P48230 202 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 FMO5P49326 533 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 KLK7P49862 253 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 MXI1P50539 228 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 CLCN3P51790 818 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms