RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 PMS2P11Q13670 270 aa6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 RAPGEF1Q13905 1077 aa6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 BOP1Q14137 746 aaKnown RBP6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 DRAP1Q14919 205 aaPredicted RBP6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 ARL13BQ3SXY8 428 aa6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 PDXDC1Q6P996 788 aa6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 CD300LGQ6UXG3 332 aa6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 TMCO2Q7Z6W1 182 aaPredicted RBP6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 COLGALT2Q8IYK4 626 aa6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 SDR16C5Q8N3Y7 309 aa6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 TC2NQ8N9U0 490 aa6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 PSD4Q8NDX1 1056 aa6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 OR8K1Q8NGG5 319 aa6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 POC1BQ8TC44 478 aa6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 PHOSPHO2Q8TCD6 241 aa6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 ZNF483Q8TF39 744 aaPredicted RBP6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 SHC3Q92529 594 aa6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 SYN2Q92777 582 aaPredicted RBP6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 SPSB4Q96A44 273 aa6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 JAKMIP2Q96AA8 810 aa6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 C8orf49Q96NF6 230 aa6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 SLC46A1Q96NT5 459 aa6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 SPAG5Q96R06 1193 aa6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 HEPHQ9BQS7 1158 aa6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 PAAF1Q9BRP4 392 aa6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 TMEM175Q9BSA9 504 aa6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 CHST8Q9H2A9 424 aa6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 FAM124BQ9H5Z6 455 aaPredicted RBP6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 NRDE2Q9H7Z3 1164 aa6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 CYP3A43Q9HB55 503 aa6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 SMPD4Q9NXE4 827 aa6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 GDAP2Q9NXN4 497 aa6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 CTTNBP2NLQ9P2B4 639 aa6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 CACNG4Q9UBN1 327 aa6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 DNAJB4Q9UDY4 337 aa6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 MTO1Q9Y2Z2 717 aaKnown RBP6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 NEU2Q9Y3R4 380 aa6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 SNX9Q9Y5X1 595 aa6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 RAD54BQ9Y620 910 aa6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 TRIP11Q15643 1979 aa6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 MICAL3Q7RTP6 2002 aa6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 RALGAPA2Q2PPJ7 1873 aa6.15□□□□□ -1.42
NIFKP3-201ENST00000417799 LRRC53A6NM62 1247 aa6.15□□□□□ -1.42
NIFKP3-201ENST00000417799 F5H423 210 aaPredicted RBP6.15□□□□□ -1.42
NIFKP3-201ENST00000417799 F8VZ95 297 aa6.15□□□□□ -1.42
NIFKP3-201ENST00000417799 H0YGN5 161 aa6.15□□□□□ -1.42
NIFKP3-201ENST00000417799 TMEM189-UBE2V1I3L0A0 370 aa6.15□□□□□ -1.42
NIFKP3-201ENST00000417799 CYB561D2O14569 222 aa6.15□□□□□ -1.42
NIFKP3-201ENST00000417799 TOR1BO14657 336 aa6.15□□□□□ -1.42
NIFKP3-201ENST00000417799 THAP12O43422 761 aa6.15□□□□□ -1.42
NIFKP3-201ENST00000417799 TACC1O75410 805 aa6.15□□□□□ -1.42
NIFKP3-201ENST00000417799 B3GAT3O94766 335 aa6.15□□□□□ -1.42
NIFKP3-201ENST00000417799 GALTP07902 379 aa6.15□□□□□ -1.42
NIFKP3-201ENST00000417799 ELANEP08246 267 aa6.15□□□□□ -1.42
NIFKP3-201ENST00000417799 WEE2P0C1S8 567 aa6.15□□□□□ -1.42
NIFKP3-201ENST00000417799 FAM163BP0C2L3 166 aa6.15□□□□□ -1.42
NIFKP3-201ENST00000417799 HNRNPH3P31942 346 aaKnown RBP6.15□□□□□ -1.42
NIFKP3-201ENST00000417799 USP8P40818 1118 aa6.15□□□□□ -1.42
NIFKP3-201ENST00000417799 STAT1P42224 750 aa6.15□□□□□ -1.42
NIFKP3-201ENST00000417799 OR1G1P47890 313 aa6.15□□□□□ -1.42
NIFKP3-201ENST00000417799 SLC11A1P49279 550 aa6.15□□□□□ -1.42
NIFKP3-201ENST00000417799 ALDH7A1P49419 539 aaKnown RBP6.15□□□□□ -1.42
NIFKP3-201ENST00000417799 AARSP49588 968 aaKnown RBP eCLIP6.15□□□□□ -1.42
NIFKP3-201ENST00000417799 RGS19P49795 217 aa6.15□□□□□ -1.42
NIFKP3-201ENST00000417799 YWHAEP62258 255 aaKnown RBP6.15□□□□□ -1.42
NIFKP3-201ENST00000417799 BTG3Q14201 252 aaPredicted RBP6.15□□□□□ -1.42
NIFKP3-201ENST00000417799 C9orf50Q5SZB4 431 aa6.15□□□□□ -1.42
NIFKP3-201ENST00000417799 SFMBT2Q5VUG0 894 aa6.15□□□□□ -1.42
NIFKP3-201ENST00000417799 SCARA5Q6ZMJ2 495 aa6.15□□□□□ -1.42
NIFKP3-201ENST00000417799 RNF44Q7L0R7 432 aa6.15□□□□□ -1.42
NIFKP3-201ENST00000417799 HERC6Q8IVU3 1022 aa6.15□□□□□ -1.42
NIFKP3-201ENST00000417799 FAM71AQ8IYT1 594 aa6.15□□□□□ -1.42
NIFKP3-201ENST00000417799 TMEM132CQ8N3T6 1108 aa6.15□□□□□ -1.42
NIFKP3-201ENST00000417799 TTC39CQ8N584 583 aa6.15□□□□□ -1.42
NIFKP3-201ENST00000417799 Q8NA96 180 aa6.15□□□□□ -1.42
NIFKP3-201ENST00000417799 APPL2Q8NEU8 664 aa6.15□□□□□ -1.42
NIFKP3-201ENST00000417799 IPCEF1Q8WWN9 437 aaPredicted RBP6.15□□□□□ -1.42
NIFKP3-201ENST00000417799 SENP8Q96LD8 212 aa6.15□□□□□ -1.42
NIFKP3-201ENST00000417799 PANX2Q96RD6 677 aa6.15□□□□□ -1.42
NIFKP3-201ENST00000417799 MMS19Q96T76 1030 aa6.15□□□□□ -1.42
NIFKP3-201ENST00000417799 YME1L1Q96TA2 773 aa6.15□□□□□ -1.42
NIFKP3-201ENST00000417799 RAD9AQ99638 391 aa6.15□□□□□ -1.42
NIFKP3-201ENST00000417799 SLC46A2Q9BY10 475 aa6.15□□□□□ -1.42
NIFKP3-201ENST00000417799 GPR88Q9GZN0 384 aa6.15□□□□□ -1.42
NIFKP3-201ENST00000417799 CWH43Q9H720 699 aa6.15□□□□□ -1.42
NIFKP3-201ENST00000417799 CISHQ9NSE2 258 aa6.15□□□□□ -1.42
NIFKP3-201ENST00000417799 ABHD10Q9NUJ1 306 aa6.15□□□□□ -1.42
NIFKP3-201ENST00000417799 ZNHIT6Q9NWK9 470 aaKnown RBP6.15□□□□□ -1.42
NIFKP3-201ENST00000417799 ZSCAN32Q9NX65 697 aa6.15□□□□□ -1.42
NIFKP3-201ENST00000417799 AIPL1Q9NZN9 384 aa6.15□□□□□ -1.42
NIFKP3-201ENST00000417799 MYO1AQ9UBC5 1043 aa6.15□□□□□ -1.42
NIFKP3-201ENST00000417799 KCNE5Q9UJ90 142 aa6.15□□□□□ -1.42
NIFKP3-201ENST00000417799 LRCH1Q9Y2L9 728 aa6.15□□□□□ -1.42
NIFKP3-201ENST00000417799 PRG3Q9Y2Y8 225 aaPredicted RBP6.15□□□□□ -1.42
NIFKP3-201ENST00000417799 INSL6Q9Y581 213 aa6.15□□□□□ -1.42
NIFKP3-201ENST00000417799 PCDHGB2Q9Y5G2 931 aa6.15□□□□□ -1.42
NIFKP3-201ENST00000417799 LTBP2Q14767 1821 aa6.15□□□□□ -1.43
NIFKP3-201ENST00000417799 ARHGEF37A1IGU5 675 aa6.14□□□□□ -1.43
NIFKP3-201ENST00000417799 E7ENX8 843 aa6.14□□□□□ -1.43
NIFKP3-201ENST00000417799 F8W810 466 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms