RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 MTX3Q5HYI7 312 aa14.55□□□□□ -0.08
HDAC9-208ENST00000417496 MORN1Q5T089 497 aa14.55□□□□□ -0.08
HDAC9-208ENST00000417496 CILP2Q8IUL8 1156 aa14.55□□□□□ -0.08
HDAC9-208ENST00000417496 MYO1HQ8N1T3 1032 aa14.55□□□□□ -0.08
HDAC9-208ENST00000417496 RTL3Q8N8U3 475 aaKnown RBP14.55□□□□□ -0.08
HDAC9-208ENST00000417496 DLG3Q92796 817 aa14.55□□□□□ -0.08
HDAC9-208ENST00000417496 HMCESQ96FZ2 354 aa14.55□□□□□ -0.08
HDAC9-208ENST00000417496 UBXN10Q96LJ8 280 aa14.55□□□□□ -0.08
HDAC9-208ENST00000417496 GSTO2Q9H4Y5 243 aa14.55□□□□□ -0.08
HDAC9-208ENST00000417496 ABCC13Q9NSE7 274 aa14.55□□□□□ -0.08
HDAC9-208ENST00000417496 EPS15L1Q9UBC2 864 aa14.55□□□□□ -0.08
HDAC9-208ENST00000417496 BCAP29Q9UHQ4 241 aa14.55□□□□□ -0.08
HDAC9-208ENST00000417496 SMIM31A0A1B0GVY4 71 aa14.54□□□□□ -0.08
HDAC9-208ENST00000417496 FGF10O15520 208 aaPredicted RBP14.54□□□□□ -0.08
HDAC9-208ENST00000417496 TBX18O95935 607 aa14.54□□□□□ -0.08
HDAC9-208ENST00000417496 FAM58BPP0C7Q3 252 aa14.54□□□□□ -0.08
HDAC9-208ENST00000417496 CKMT2P17540 419 aa14.54□□□□□ -0.08
HDAC9-208ENST00000417496 SERPINH1P50454 418 aaKnown RBP14.54□□□□□ -0.08
HDAC9-208ENST00000417496 STX5Q13190 355 aa14.54□□□□□ -0.08
HDAC9-208ENST00000417496 GNASQ5JWF2 1037 aa14.54□□□□□ -0.08
HDAC9-208ENST00000417496 METTL23Q86XA0 190 aa14.54□□□□□ -0.08
HDAC9-208ENST00000417496 HERC6Q8IVU3 1022 aa14.54□□□□□ -0.08
HDAC9-208ENST00000417496 PSMG2Q969U7 264 aa14.54□□□□□ -0.08
HDAC9-208ENST00000417496 ZNF512Q96ME7 567 aaPredicted RBP14.54□□□□□ -0.08
HDAC9-208ENST00000417496 UNC93B1Q9H1C4 597 aa14.54□□□□□ -0.08
HDAC9-208ENST00000417496 RNF11Q9Y3C5 154 aa14.54□□□□□ -0.08
HDAC9-208ENST00000417496 MRASO14807 208 aa14.54□□□□□ -0.08
HDAC9-208ENST00000417496 TRIM24O15164 1050 aa14.54□□□□□ -0.08
HDAC9-208ENST00000417496 TNFAIP8O95379 198 aa14.54□□□□□ -0.08
HDAC9-208ENST00000417496 SNRPB2P08579 225 aaKnown RBP14.54□□□□□ -0.08
HDAC9-208ENST00000417496 HOXC13P31276 330 aa14.54□□□□□ -0.08
HDAC9-208ENST00000417496 SOX11P35716 441 aa14.54□□□□□ -0.08
HDAC9-208ENST00000417496 LEPRP48357 1165 aaKnown RBP14.54□□□□□ -0.08
HDAC9-208ENST00000417496 POLD2P49005 469 aa14.54□□□□□ -0.08
HDAC9-208ENST00000417496 RPL26P61254 145 aaKnown RBP14.54□□□□□ -0.08
HDAC9-208ENST00000417496 DDR2Q16832 855 aa14.54□□□□□ -0.08
HDAC9-208ENST00000417496 BRMS1LQ5PSV4 323 aa14.54□□□□□ -0.08
HDAC9-208ENST00000417496 TAF2Q6P1X5 1199 aa14.54□□□□□ -0.08
HDAC9-208ENST00000417496 KLC3Q6P597 504 aa14.54□□□□□ -0.08
HDAC9-208ENST00000417496 ISCA2Q86U28 154 aa14.54□□□□□ -0.08
HDAC9-208ENST00000417496 CIR1Q86X95 450 aaPredicted RBP14.54□□□□□ -0.08
HDAC9-208ENST00000417496 LZTR1Q8N653 840 aa14.54□□□□□ -0.08
HDAC9-208ENST00000417496 PTCD2Q8WV60 388 aaKnown RBP14.54□□□□□ -0.08
HDAC9-208ENST00000417496 PPWD1Q96BP3 646 aaKnown RBP14.54□□□□□ -0.08
HDAC9-208ENST00000417496 PTERQ96BW5 349 aa14.54□□□□□ -0.08
HDAC9-208ENST00000417496 SMOC2Q9H3U7 446 aa14.54□□□□□ -0.08
HDAC9-208ENST00000417496 EML4Q9HC35 981 aaKnown RBP14.54□□□□□ -0.08
HDAC9-208ENST00000417496 SPAG4Q9NPE6 437 aa14.54□□□□□ -0.08
HDAC9-208ENST00000417496 DSEQ9UL01 958 aa14.54□□□□□ -0.08
HDAC9-208ENST00000417496 SLC4A7Q9Y6M7 1214 aa14.54□□□□□ -0.08
HDAC9-208ENST00000417496 HEATR9A2RTY3 570 aa14.53□□□□□ -0.08
HDAC9-208ENST00000417496 TNFRSF10BO14763 440 aa14.53□□□□□ -0.08
HDAC9-208ENST00000417496 TIPRLO75663 272 aa14.53□□□□□ -0.08
HDAC9-208ENST00000417496 ALDOCP09972 364 aaKnown RBP14.53□□□□□ -0.08
HDAC9-208ENST00000417496 RPL9P32969 192 aaKnown RBP14.53□□□□□ -0.08
HDAC9-208ENST00000417496 CYP2C18P33260 490 aa14.53□□□□□ -0.08
HDAC9-208ENST00000417496 SLC7A2P52569 658 aa14.53□□□□□ -0.08
HDAC9-208ENST00000417496 MLLT6P55198 1093 aaPredicted RBP14.53□□□□□ -0.08
HDAC9-208ENST00000417496 FOXA1P55317 472 aa14.53□□□□□ -0.08
HDAC9-208ENST00000417496 SH3BP2P78314 561 aa14.53□□□□□ -0.08
HDAC9-208ENST00000417496 C6orf10Q5SRN2 563 aa14.53□□□□□ -0.08
HDAC9-208ENST00000417496 RETREG3Q86VR2 466 aa14.53□□□□□ -0.08
HDAC9-208ENST00000417496 SPATA2LQ8IUW3 424 aaPredicted RBP14.53□□□□□ -0.08
HDAC9-208ENST00000417496 FUNDC1Q8IVP5 155 aa14.53□□□□□ -0.08
HDAC9-208ENST00000417496 RSPH1Q8WYR4 309 aa14.53□□□□□ -0.08
HDAC9-208ENST00000417496 MRM3Q9HC36 420 aaKnown RBP14.53□□□□□ -0.08
HDAC9-208ENST00000417496 ETAA1Q9NY74 926 aa14.53□□□□□ -0.08
HDAC9-208ENST00000417496 ABI2Q9NYB9 513 aaPredicted RBP14.53□□□□□ -0.08
HDAC9-208ENST00000417496 UTP6Q9NYH9 597 aaKnown RBP14.53□□□□□ -0.08
HDAC9-208ENST00000417496 TRPV2Q9Y5S1 764 aa14.53□□□□□ -0.08
HDAC9-208ENST00000417496 H3BSA7 217 aa14.53□□□□□ -0.08
HDAC9-208ENST00000417496 S1PR4O95977 384 aa14.53□□□□□ -0.08
HDAC9-208ENST00000417496 MMP2P08253 660 aa14.53□□□□□ -0.08
HDAC9-208ENST00000417496 PRSS56P0CW18 603 aa14.53□□□□□ -0.08
HDAC9-208ENST00000417496 DNAJB1P25685 340 aa14.53□□□□□ -0.08
HDAC9-208ENST00000417496 PCSK6P29122 969 aa14.53□□□□□ -0.08
HDAC9-208ENST00000417496 HOXC8P31273 242 aa14.53□□□□□ -0.08
HDAC9-208ENST00000417496 RHDQ02161 417 aa14.53□□□□□ -0.08
HDAC9-208ENST00000417496 DYNC1I2Q13409 638 aaKnown RBP14.53□□□□□ -0.08
HDAC9-208ENST00000417496 SQLEQ14534 574 aa14.53□□□□□ -0.08
HDAC9-208ENST00000417496 ACAP2Q15057 778 aa14.53□□□□□ -0.08
HDAC9-208ENST00000417496 AFMIDQ63HM1 303 aa14.53□□□□□ -0.08
HDAC9-208ENST00000417496 TIGD7Q6NT04 549 aaPredicted RBP14.53□□□□□ -0.08
HDAC9-208ENST00000417496 CATSPER1Q8NEC5 780 aa14.53□□□□□ -0.08
HDAC9-208ENST00000417496 IMP4Q96G21 291 aaKnown RBP14.53□□□□□ -0.08
HDAC9-208ENST00000417496 TBATAQ96M53 351 aa14.53□□□□□ -0.08
HDAC9-208ENST00000417496 NSUN5Q96P11 429 aaKnown RBP14.53□□□□□ -0.08
HDAC9-208ENST00000417496 KCNA7Q96RP8 456 aa14.53□□□□□ -0.08
HDAC9-208ENST00000417496 KATNAL1Q9BW62 490 aa14.53□□□□□ -0.08
HDAC9-208ENST00000417496 SENP6Q9GZR1 1112 aaPredicted RBP14.53□□□□□ -0.08
HDAC9-208ENST00000417496 SLC25A51Q9H1U9 297 aa14.53□□□□□ -0.08
HDAC9-208ENST00000417496 UXTQ9UBK9 157 aaPredicted RBP14.53□□□□□ -0.08
HDAC9-208ENST00000417496 PADI3Q9ULW8 664 aa14.53□□□□□ -0.08
HDAC9-208ENST00000417496 GIT1Q9Y2X7 761 aa14.53□□□□□ -0.08
HDAC9-208ENST00000417496 A0A1B0GTL3 188 aa14.52□□□□□ -0.08
HDAC9-208ENST00000417496 ZNF839A8K0R7 811 aa14.52□□□□□ -0.08
HDAC9-208ENST00000417496 PLOD2O00469 737 aa14.52□□□□□ -0.08
HDAC9-208ENST00000417496 NRP2O60462 931 aa14.52□□□□□ -0.08
HDAC9-208ENST00000417496 CHRM3P20309 590 aa14.52□□□□□ -0.08
HDAC9-208ENST00000417496 KPNA2P52292 529 aaKnown RBP14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms