RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 ZSWIM9Q86XI8 627 aa25.48■■□□□ 1.67
VEGFA-208ENST00000417285 WDR48Q8TAF3 677 aa25.48■■□□□ 1.67
VEGFA-208ENST00000417285 TEKT4Q8WW24 435 aa25.48■■□□□ 1.67
VEGFA-208ENST00000417285 SPOCK2Q92563 424 aa25.48■■□□□ 1.67
VEGFA-208ENST00000417285 NAT6Q93015 286 aa25.48■■□□□ 1.67
VEGFA-208ENST00000417285 STAU2Q9NUL3 570 aaKnown RBP eCLIP25.48■■□□□ 1.67
VEGFA-208ENST00000417285 PNMA8BQ9ULN7 279 aaPredicted RBP25.48■■□□□ 1.67
VEGFA-208ENST00000417285 DOLKQ9UPQ8 538 aa25.48■■□□□ 1.67
VEGFA-208ENST00000417285 CBFA2T2O43439 604 aa25.47■■□□□ 1.67
VEGFA-208ENST00000417285 CSO75390 466 aaKnown RBP25.47■■□□□ 1.67
VEGFA-208ENST00000417285 CTSEP14091 401 aa25.47■■□□□ 1.67
VEGFA-208ENST00000417285 LSSP48449 732 aa25.47■■□□□ 1.67
VEGFA-208ENST00000417285 TBC1D25Q3MII6 688 aa25.47■■□□□ 1.67
VEGFA-208ENST00000417285 GUSBP11Q6P575 273 aa25.47■■□□□ 1.67
VEGFA-208ENST00000417285 HID1Q8IV36 788 aa25.47■■□□□ 1.67
VEGFA-208ENST00000417285 ZNF578Q96N58 590 aaPredicted RBP25.47■■□□□ 1.67
VEGFA-208ENST00000417285 CLPBQ9H078 707 aa25.47■■□□□ 1.67
VEGFA-208ENST00000417285 PCDHB1Q9Y5F3 818 aa25.47■■□□□ 1.67
VEGFA-208ENST00000417285 MYO1FO00160 1098 aa25.46■■□□□ 1.67
VEGFA-208ENST00000417285 TRAFD1O14545 582 aaPredicted RBP25.46■■□□□ 1.67
VEGFA-208ENST00000417285 USP12O75317 370 aa25.46■■□□□ 1.67
VEGFA-208ENST00000417285 RARAP10276 462 aa25.46■■□□□ 1.67
VEGFA-208ENST00000417285 TCF4P15884 667 aa25.46■■□□□ 1.67
VEGFA-208ENST00000417285 AMPD1P23109 780 aa25.46■■□□□ 1.67
VEGFA-208ENST00000417285 SRP54P61011 504 aaKnown RBP25.46■■□□□ 1.67
VEGFA-208ENST00000417285 SLC10A7Q0GE19 358 aa25.46■■□□□ 1.67
VEGFA-208ENST00000417285 ENPP7Q6UWV6 458 aa25.46■■□□□ 1.67
VEGFA-208ENST00000417285 DPPA4Q7L190 304 aa25.46■■□□□ 1.67
VEGFA-208ENST00000417285 LRRC49Q8IUZ0 686 aa25.46■■□□□ 1.67
VEGFA-208ENST00000417285 BBS5Q8N3I7 341 aa25.46■■□□□ 1.67
VEGFA-208ENST00000417285 BTBD6Q96KE9 485 aa25.46■■□□□ 1.67
VEGFA-208ENST00000417285 CSPG4P5Q96PW8 444 aa25.46■■□□□ 1.67
VEGFA-208ENST00000417285 PADI4Q9UM07 663 aa25.46■■□□□ 1.67
VEGFA-208ENST00000417285 MYLKQ15746 1914 aa25.45■■□□□ 1.67
VEGFA-208ENST00000417285 MUSKO15146 869 aa25.45■■□□□ 1.66
VEGFA-208ENST00000417285 TCEA3O75764 348 aa25.45■■□□□ 1.66
VEGFA-208ENST00000417285 DXOO77932 396 aaKnown RBP25.45■■□□□ 1.66
VEGFA-208ENST00000417285 RECQL5O94762 991 aaPredicted RBP25.45■■□□□ 1.66
VEGFA-208ENST00000417285 HOXC4P09017 264 aaPredicted RBP25.45■■□□□ 1.66
VEGFA-208ENST00000417285 ELFN1P0C7U0 828 aa25.45■■□□□ 1.66
VEGFA-208ENST00000417285 TGM2P21980 687 aa25.45■■□□□ 1.66
VEGFA-208ENST00000417285 NFKBIAP25963 317 aa25.45■■□□□ 1.66
VEGFA-208ENST00000417285 HNRNPH3P31942 346 aaKnown RBP25.45■■□□□ 1.66
VEGFA-208ENST00000417285 TRIM14Q14142 442 aa25.45■■□□□ 1.66
VEGFA-208ENST00000417285 ZNF235Q14590 738 aa25.45■■□□□ 1.66
VEGFA-208ENST00000417285 ISXQ2M1V0 245 aa25.45■■□□□ 1.66
VEGFA-208ENST00000417285 ALG11Q2TAA5 492 aa25.45■■□□□ 1.66
VEGFA-208ENST00000417285 LIPIQ6XZB0 460 aa25.45■■□□□ 1.66
VEGFA-208ENST00000417285 GKN2Q86XP6 184 aa25.45■■□□□ 1.66
VEGFA-208ENST00000417285 SLC35F3Q8IY50 421 aa25.45■■□□□ 1.66
VEGFA-208ENST00000417285 NSMCE1Q8WV22 266 aa25.45■■□□□ 1.66
VEGFA-208ENST00000417285 TSACCQ96A04 125 aaPredicted RBP25.45■■□□□ 1.66
VEGFA-208ENST00000417285 WDR92Q96MX6 357 aa25.45■■□□□ 1.66
VEGFA-208ENST00000417285 POLR1BQ9H9Y6 1135 aa25.45■■□□□ 1.66
VEGFA-208ENST00000417285 KCTD5Q9NXV2 234 aa25.45■■□□□ 1.66
VEGFA-208ENST00000417285 KLQ9UEF7 1012 aa25.45■■□□□ 1.66
VEGFA-208ENST00000417285 OR1A2Q9Y585 309 aa25.45■■□□□ 1.66
VEGFA-208ENST00000417285 TNFP01375 233 aa25.44■■□□□ 1.66
VEGFA-208ENST00000417285 PRKCGP05129 697 aa25.44■■□□□ 1.66
VEGFA-208ENST00000417285 KELP23276 732 aa25.44■■□□□ 1.66
VEGFA-208ENST00000417285 SERPINB6P35237 376 aa25.44■■□□□ 1.66
VEGFA-208ENST00000417285 SLC25A11Q02978 314 aaKnown RBP25.44■■□□□ 1.66
VEGFA-208ENST00000417285 RALGPS1Q5JS13 557 aa25.44■■□□□ 1.66
VEGFA-208ENST00000417285 RD3Q7Z3Z2 195 aa25.44■■□□□ 1.66
VEGFA-208ENST00000417285 TP53INP2Q8IXH6 220 aa25.44■■□□□ 1.66
VEGFA-208ENST00000417285 RCOR3Q9P2K3 495 aaPredicted RBP25.44■■□□□ 1.66
VEGFA-208ENST00000417285 DGKBQ9Y6T7 804 aa25.44■■□□□ 1.66
VEGFA-208ENST00000417285 CACNB4O00305 520 aaPredicted RBP25.43■■□□□ 1.66
VEGFA-208ENST00000417285 HTRA2O43464 458 aaPredicted RBP25.43■■□□□ 1.66
VEGFA-208ENST00000417285 SOCS5O75159 536 aa25.43■■□□□ 1.66
VEGFA-208ENST00000417285 PEX11BO96011 259 aa25.43■■□□□ 1.66
VEGFA-208ENST00000417285 PCCBP05166 539 aa25.43■■□□□ 1.66
VEGFA-208ENST00000417285 HOXB3P14651 431 aaPredicted RBP25.43■■□□□ 1.66
VEGFA-208ENST00000417285 ITPKBP27987 946 aa25.43■■□□□ 1.66
VEGFA-208ENST00000417285 TRIM23P36406 574 aa25.43■■□□□ 1.66
VEGFA-208ENST00000417285 SSR1P43307 286 aaKnown RBP25.43■■□□□ 1.66
VEGFA-208ENST00000417285 ERVPABLB-1P60509 514 aa25.43■■□□□ 1.66
VEGFA-208ENST00000417285 RALGDSQ12967 914 aa25.43■■□□□ 1.66
VEGFA-208ENST00000417285 KRT81Q14533 505 aa25.43■■□□□ 1.66
VEGFA-208ENST00000417285 HADHQ16836 314 aaKnown RBP25.43■■□□□ 1.66
VEGFA-208ENST00000417285 SPECC1LQ69YQ0 1117 aa25.43■■□□□ 1.66
VEGFA-208ENST00000417285 RBM44Q6ZP01 1051 aaKnown RBP25.43■■□□□ 1.66
VEGFA-208ENST00000417285 ZNF564Q8TBZ8 553 aaPredicted RBP25.43■■□□□ 1.66
VEGFA-208ENST00000417285 NUDCD1Q96RS6 583 aa25.43■■□□□ 1.66
VEGFA-208ENST00000417285 PCDH18Q9HCL0 1135 aa25.43■■□□□ 1.66
VEGFA-208ENST00000417285 ETNK2Q9NVF9 386 aa25.43■■□□□ 1.66
VEGFA-208ENST00000417285 FASNP49327 2511 aaKnown RBP25.43■■□□□ 1.66
VEGFA-208ENST00000417285 PDE2AO00408 941 aaPredicted RBP25.42■■□□□ 1.66
VEGFA-208ENST00000417285 TNFRSF10CO14798 259 aa25.42■■□□□ 1.66
VEGFA-208ENST00000417285 MAFKO60675 156 aa25.42■■□□□ 1.66
VEGFA-208ENST00000417285 MPOP05164 745 aa25.42■■□□□ 1.66
VEGFA-208ENST00000417285 CDH6P55285 790 aa25.42■■□□□ 1.66
VEGFA-208ENST00000417285 KIAA1024LP59773 190 aa25.42■■□□□ 1.66
VEGFA-208ENST00000417285 GABREP78334 506 aa25.42■■□□□ 1.66
VEGFA-208ENST00000417285 SOWAHCQ53LP3 525 aaPredicted RBP25.42■■□□□ 1.66
VEGFA-208ENST00000417285 TXNRD3NBQ6F5E7 133 aa25.42■■□□□ 1.66
VEGFA-208ENST00000417285 ARL10Q8N8L6 244 aa25.42■■□□□ 1.66
VEGFA-208ENST00000417285 PLA2G15Q8NCC3 412 aa25.42■■□□□ 1.66
VEGFA-208ENST00000417285 OR6C4Q8NGE1 309 aa25.42■■□□□ 1.66
VEGFA-208ENST00000417285 TSPY26PQ9H489 355 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms