RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 IFT43Q96FT9 208 aa23.2■■□□□ 1.3
SMARCB1-205ENST00000417137 USP29Q9HBJ7 922 aa23.2■■□□□ 1.3
SMARCB1-205ENST00000417137 B4GALT6Q9UBX8 382 aa23.2■■□□□ 1.3
SMARCB1-205ENST00000417137 FAM153AQ9UHL3 310 aa23.2■■□□□ 1.3
SMARCB1-205ENST00000417137 RSPH14Q9UHP6 348 aa23.2■■□□□ 1.3
SMARCB1-205ENST00000417137 DNPEPQ9ULA0 475 aa23.2■■□□□ 1.3
SMARCB1-205ENST00000417137 R3HDM2Q9Y2K5 976 aaKnown RBP23.2■■□□□ 1.3
SMARCB1-205ENST00000417137 ZKSCAN5Q9Y2L8 839 aa23.2■■□□□ 1.3
SMARCB1-205ENST00000417137 SLCO1B1Q9Y6L6 691 aa23.2■■□□□ 1.3
SMARCB1-205ENST00000417137 GON4LQ3T8J9 2241 aa23.19■■□□□ 1.3
SMARCB1-205ENST00000417137 LNP1A1A4G5 178 aa23.19■■□□□ 1.3
SMARCB1-205ENST00000417137 FGGP02679 453 aa23.19■■□□□ 1.3
SMARCB1-205ENST00000417137 ELFN1P0C7U0 828 aa23.19■■□□□ 1.3
SMARCB1-205ENST00000417137 ENGP17813 658 aa23.19■■□□□ 1.3
SMARCB1-205ENST00000417137 NFKB1P19838 968 aa23.19■■□□□ 1.3
SMARCB1-205ENST00000417137 STIP1P31948 543 aaKnown RBP23.19■■□□□ 1.3
SMARCB1-205ENST00000417137 CXCR5P32302 372 aa23.19■■□□□ 1.3
SMARCB1-205ENST00000417137 CD68P34810 354 aaPredicted RBP23.19■■□□□ 1.3
SMARCB1-205ENST00000417137 CDK18Q07002 472 aa23.19■■□□□ 1.3
SMARCB1-205ENST00000417137 ARHGEF7Q14155 803 aa23.19■■□□□ 1.3
SMARCB1-205ENST00000417137 FGL2Q14314 439 aa23.19■■□□□ 1.3
SMARCB1-205ENST00000417137 IHHQ14623 411 aa23.19■■□□□ 1.3
SMARCB1-205ENST00000417137 LONRF2Q1L5Z9 754 aa23.19■■□□□ 1.3
SMARCB1-205ENST00000417137 ANKRD20A2Q5SQ80 823 aa23.19■■□□□ 1.3
SMARCB1-205ENST00000417137 ANKRD20A1Q5TYW2 823 aa23.19■■□□□ 1.3
SMARCB1-205ENST00000417137 ANKRD20A3Q5VUR7 823 aa23.19■■□□□ 1.3
SMARCB1-205ENST00000417137 DENND6BQ8NEG7 585 aa23.19■■□□□ 1.3
SMARCB1-205ENST00000417137 LPCAT1Q8NF37 534 aa23.19■■□□□ 1.3
SMARCB1-205ENST00000417137 TADA1Q96BN2 335 aa23.19■■□□□ 1.3
SMARCB1-205ENST00000417137 PPP1R2P1Q96PQ5 205 aa23.19■■□□□ 1.3
SMARCB1-205ENST00000417137 MCCC1Q96RQ3 725 aaPredicted RBP23.19■■□□□ 1.3
SMARCB1-205ENST00000417137 EDEM2Q9BV94 578 aa23.19■■□□□ 1.3
SMARCB1-205ENST00000417137 HOMER3Q9NSC5 361 aa23.19■■□□□ 1.3
SMARCB1-205ENST00000417137 ANKRD6Q9Y2G4 727 aa23.19■■□□□ 1.3
SMARCB1-205ENST00000417137 EP300Q09472 2414 aaPredicted RBP23.18■■□□□ 1.3
SMARCB1-205ENST00000417137 TNRC6BQ9UPQ9 1833 aaKnown RBP23.18■■□□□ 1.3
SMARCB1-205ENST00000417137 A0A1B0GVT2 93 aa23.18■■□□□ 1.3
SMARCB1-205ENST00000417137 A0A1W2PR77 199 aa23.18■■□□□ 1.3
SMARCB1-205ENST00000417137 C5orf60A6NFR6 353 aa23.18■■□□□ 1.3
SMARCB1-205ENST00000417137 FPGTO14772 594 aa23.18■■□□□ 1.3
SMARCB1-205ENST00000417137 OPHN1O60890 802 aa23.18■■□□□ 1.3
SMARCB1-205ENST00000417137 ANXA9O76027 345 aa23.18■■□□□ 1.3
SMARCB1-205ENST00000417137 PRLP01236 227 aa23.18■■□□□ 1.3
SMARCB1-205ENST00000417137 C6P13671 934 aa23.18■■□□□ 1.3
SMARCB1-205ENST00000417137 GNG11P61952 73 aa23.18■■□□□ 1.3
SMARCB1-205ENST00000417137 PRPSAP1Q14558 356 aa23.18■■□□□ 1.3
SMARCB1-205ENST00000417137 LIPIQ6XZB0 460 aa23.18■■□□□ 1.3
SMARCB1-205ENST00000417137 TMEM145Q8NBT3 493 aa23.18■■□□□ 1.3
SMARCB1-205ENST00000417137 SPATA22Q8NHS9 363 aa23.18■■□□□ 1.3
SMARCB1-205ENST00000417137 RMDN1Q96DB5 314 aa23.18■■□□□ 1.3
SMARCB1-205ENST00000417137 KLHDC7BQ96G42 594 aa23.18■■□□□ 1.3
SMARCB1-205ENST00000417137 SPATA13Q96N96 652 aa23.18■■□□□ 1.3
SMARCB1-205ENST00000417137 NAP1L3Q99457 506 aaPredicted RBP23.18■■□□□ 1.3
SMARCB1-205ENST00000417137 MLPHQ9BV36 600 aaPredicted RBP23.18■■□□□ 1.3
SMARCB1-205ENST00000417137 GTPBP2Q9BX10 602 aaKnown RBP23.18■■□□□ 1.3
SMARCB1-205ENST00000417137 KCTD5Q9NXV2 234 aa23.18■■□□□ 1.3
SMARCB1-205ENST00000417137 A0A0J9YYE9 177 aa23.17■■□□□ 1.3
SMARCB1-205ENST00000417137 A8MX80 341 aa23.17■■□□□ 1.3
SMARCB1-205ENST00000417137 ANKRD66B4E2M5 251 aa23.17■■□□□ 1.3
SMARCB1-205ENST00000417137 TLR4O00206 839 aa23.17■■□□□ 1.3
SMARCB1-205ENST00000417137 LIASO43766 372 aa23.17■■□□□ 1.3
SMARCB1-205ENST00000417137 PMPCBO75439 489 aa23.17■■□□□ 1.3
SMARCB1-205ENST00000417137 MT-CYBP00156 380 aaPredicted RBP23.17■■□□□ 1.3
SMARCB1-205ENST00000417137 TRBC1P01850 177 aa23.17■■□□□ 1.3
SMARCB1-205ENST00000417137 CTPS1P17812 591 aa23.17■■□□□ 1.3
SMARCB1-205ENST00000417137 SDHBP21912 280 aa23.17■■□□□ 1.3
SMARCB1-205ENST00000417137 SEMG2Q02383 582 aa23.17■■□□□ 1.3
SMARCB1-205ENST00000417137 RALGDSQ12967 914 aa23.17■■□□□ 1.3
SMARCB1-205ENST00000417137 GRIK2Q13002 908 aa23.17■■□□□ 1.3
SMARCB1-205ENST00000417137 MPP3Q13368 585 aa23.17■■□□□ 1.3
SMARCB1-205ENST00000417137 AGERQ15109 404 aa23.17■■□□□ 1.3
SMARCB1-205ENST00000417137 PCSK7Q16549 785 aa23.17■■□□□ 1.3
SMARCB1-205ENST00000417137 CCNG2Q16589 344 aa23.17■■□□□ 1.3
SMARCB1-205ENST00000417137 FAM182AQ5T1J6 154 aa23.17■■□□□ 1.3
SMARCB1-205ENST00000417137 FAM71DQ8N9W8 422 aa23.17■■□□□ 1.3
SMARCB1-205ENST00000417137 C1orf54Q8WWF1 131 aa23.17■■□□□ 1.3
SMARCB1-205ENST00000417137 MYOCQ99972 504 aa23.17■■□□□ 1.3
SMARCB1-205ENST00000417137 TMEM121Q9BTD3 319 aa23.17■■□□□ 1.3
SMARCB1-205ENST00000417137 GBA3Q9H227 469 aa23.17■■□□□ 1.3
SMARCB1-205ENST00000417137 FZD3Q9NPG1 666 aa23.17■■□□□ 1.3
SMARCB1-205ENST00000417137 TMEM9BQ9NQ34 198 aa23.17■■□□□ 1.3
SMARCB1-205ENST00000417137 KCND1Q9NSA2 647 aa23.17■■□□□ 1.3
SMARCB1-205ENST00000417137 ZNF148Q9UQR1 794 aa23.17■■□□□ 1.3
SMARCB1-205ENST00000417137 AAR2Q9Y312 384 aaKnown RBP23.17■■□□□ 1.3
SMARCB1-205ENST00000417137 LOC105378220A0A1B0GUY1 285 aaPredicted RBP23.16■■□□□ 1.3
SMARCB1-205ENST00000417137 PSMD11O00231 422 aa23.16■■□□□ 1.3
SMARCB1-205ENST00000417137 WNT9AO14904 365 aa23.16■■□□□ 1.3
SMARCB1-205ENST00000417137 HEXIM1O94992 359 aaKnown RBP23.16■■□□□ 1.3
SMARCB1-205ENST00000417137 EPOP01588 193 aa23.16■■□□□ 1.3
SMARCB1-205ENST00000417137 ATP1A1P05023 1023 aaKnown RBP23.16■■□□□ 1.3
SMARCB1-205ENST00000417137 HNF1BP35680 557 aa23.16■■□□□ 1.3
SMARCB1-205ENST00000417137 GEMP55040 296 aa23.16■■□□□ 1.3
SMARCB1-205ENST00000417137 LRRC14Q15048 493 aa23.16■■□□□ 1.3
SMARCB1-205ENST00000417137 ARHGEF18Q6ZSZ5 1173 aa23.16■■□□□ 1.3
SMARCB1-205ENST00000417137 KDELC2Q7Z4H8 507 aa23.16■■□□□ 1.3
SMARCB1-205ENST00000417137 DCP2Q8IU60 420 aaKnown RBP23.16■■□□□ 1.3
SMARCB1-205ENST00000417137 NETO1Q8TDF5 533 aa23.16■■□□□ 1.3
SMARCB1-205ENST00000417137 ATG4AQ8WYN0 398 aa23.16■■□□□ 1.3
SMARCB1-205ENST00000417137 CENPTQ96BT3 561 aa23.16■■□□□ 1.3
SMARCB1-205ENST00000417137 LRRC45Q96CN5 670 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms