RNA–Protein interactions for RNA: ENST00000416721.6

RBFOX2-208, Transcript of RNA binding fox-1 homolog 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBFOX2, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-208ENST00000416721 PRICKLE2Q7Z3G6 844 aa11.03□□□□□ -0.64
RBFOX2-208ENST00000416721 CCNJLQ8IV13 435 aa11.03□□□□□ -0.64
RBFOX2-208ENST00000416721 MCOLN2Q8IZK6 566 aa11.03□□□□□ -0.64
RBFOX2-208ENST00000416721 UMODL1-AS1Q8N2C9 162 aa11.03□□□□□ -0.64
RBFOX2-208ENST00000416721 PDXPQ96GD0 296 aa11.03□□□□□ -0.64
RBFOX2-208ENST00000416721 ZNF641Q96N77 438 aaPredicted RBP11.03□□□□□ -0.64
RBFOX2-208ENST00000416721 CCNL2Q96S94 520 aaPredicted RBP11.03□□□□□ -0.64
RBFOX2-208ENST00000416721 LRRN3Q9H3W5 708 aa11.03□□□□□ -0.64
RBFOX2-208ENST00000416721 PARVAQ9NVD7 372 aa11.03□□□□□ -0.64
RBFOX2-208ENST00000416721 ANO10Q9NW15 660 aa11.03□□□□□ -0.64
RBFOX2-208ENST00000416721 MYO1AQ9UBC5 1043 aa11.03□□□□□ -0.64
RBFOX2-208ENST00000416721 PCDHGA8Q9Y5G5 932 aa11.03□□□□□ -0.64
RBFOX2-208ENST00000416721 TMEM202A6NGA9 273 aa11.02□□□□□ -0.65
RBFOX2-208ENST00000416721 D6RAR5 112 aa11.02□□□□□ -0.65
RBFOX2-208ENST00000416721 TMX2-CTNND1H3BSU7 103 aa11.02□□□□□ -0.65
RBFOX2-208ENST00000416721 SLC28A2O43868 658 aa11.02□□□□□ -0.65
RBFOX2-208ENST00000416721 PRAMEF11O60813 436 aa11.02□□□□□ -0.65
RBFOX2-208ENST00000416721 ITGA2BP08514 1039 aa11.02□□□□□ -0.65
RBFOX2-208ENST00000416721 FERP16591 822 aa11.02□□□□□ -0.65
RBFOX2-208ENST00000416721 KELP23276 732 aa11.02□□□□□ -0.65
RBFOX2-208ENST00000416721 RGRP47804 291 aa11.02□□□□□ -0.65
RBFOX2-208ENST00000416721 NDST2P52849 883 aa11.02□□□□□ -0.65
RBFOX2-208ENST00000416721 AIF1P55008 147 aa11.02□□□□□ -0.65
RBFOX2-208ENST00000416721 CLN3Q13286 438 aa11.02□□□□□ -0.65
RBFOX2-208ENST00000416721 TGIF1Q15583 401 aa11.02□□□□□ -0.65
RBFOX2-208ENST00000416721 CA9Q16790 459 aa11.02□□□□□ -0.65
RBFOX2-208ENST00000416721 MAP9Q49MG5 647 aa11.02□□□□□ -0.65
RBFOX2-208ENST00000416721 ERMARDQ5T6L9 678 aa11.02□□□□□ -0.65
RBFOX2-208ENST00000416721 LVRNQ6Q4G3 990 aa11.02□□□□□ -0.65
RBFOX2-208ENST00000416721 ARHGAP36Q6ZRI8 547 aa11.02□□□□□ -0.65
RBFOX2-208ENST00000416721 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.02□□□□□ -0.65
RBFOX2-208ENST00000416721 OR56A4Q8NGH8 313 aa11.02□□□□□ -0.65
RBFOX2-208ENST00000416721 HCAR2Q8TDS4 363 aa11.02□□□□□ -0.65
RBFOX2-208ENST00000416721 JPH3Q8WXH2 748 aaPredicted RBP11.02□□□□□ -0.65
RBFOX2-208ENST00000416721 OR1E3Q8WZA6 343 aa11.02□□□□□ -0.65
RBFOX2-208ENST00000416721 TMEM74Q96NL1 305 aa11.02□□□□□ -0.65
RBFOX2-208ENST00000416721 SEMA4CQ9C0C4 833 aa11.02□□□□□ -0.65
RBFOX2-208ENST00000416721 TMEM168Q9H0V1 697 aa11.02□□□□□ -0.65
RBFOX2-208ENST00000416721 WDR26Q9H7D7 661 aa11.02□□□□□ -0.65
RBFOX2-208ENST00000416721 TAS2R14Q9NYV8 317 aa11.02□□□□□ -0.65
RBFOX2-208ENST00000416721 LRIT1Q9P2V4 623 aa11.02□□□□□ -0.65
RBFOX2-208ENST00000416721 LOXL2Q9Y4K0 774 aa11.02□□□□□ -0.65
RBFOX2-208ENST00000416721 PCDHB11Q9Y5F2 797 aa11.02□□□□□ -0.65
RBFOX2-208ENST00000416721 HEMK1Q9Y5R4 338 aaPredicted RBP11.02□□□□□ -0.65
RBFOX2-208ENST00000416721 RHPN2P1A8MT19 583 aa11.01□□□□□ -0.65
RBFOX2-208ENST00000416721 K7ENP7 123 aa11.01□□□□□ -0.65
RBFOX2-208ENST00000416721 ITIH1P19827 911 aa11.01□□□□□ -0.65
RBFOX2-208ENST00000416721 MMP12P39900 470 aa11.01□□□□□ -0.65
RBFOX2-208ENST00000416721 SSR1P43307 286 aaKnown RBP11.01□□□□□ -0.65
RBFOX2-208ENST00000416721 OGDHQ02218 1023 aa11.01□□□□□ -0.65
RBFOX2-208ENST00000416721 ITKQ08881 620 aa11.01□□□□□ -0.65
RBFOX2-208ENST00000416721 MAMLD1Q13495 774 aa11.01□□□□□ -0.65
RBFOX2-208ENST00000416721 MTM1Q13496 603 aa11.01□□□□□ -0.65
RBFOX2-208ENST00000416721 ZNF235Q14590 738 aa11.01□□□□□ -0.65
RBFOX2-208ENST00000416721 STX1AQ16623 288 aa11.01□□□□□ -0.65
RBFOX2-208ENST00000416721 KCTD16Q68DU8 428 aa11.01□□□□□ -0.65
RBFOX2-208ENST00000416721 INO80CQ6PI98 192 aaPredicted RBP11.01□□□□□ -0.65
RBFOX2-208ENST00000416721 DOK6Q6PKX4 331 aa11.01□□□□□ -0.65
RBFOX2-208ENST00000416721 RFX8Q6ZV50 586 aa11.01□□□□□ -0.65
RBFOX2-208ENST00000416721 ZSWIM9Q86XI8 627 aa11.01□□□□□ -0.65
RBFOX2-208ENST00000416721 SFTPA2Q8IWL1 248 aa11.01□□□□□ -0.65
RBFOX2-208ENST00000416721 AOPEPQ8N6M6 819 aa11.01□□□□□ -0.65
RBFOX2-208ENST00000416721 OR6C4Q8NGE1 309 aa11.01□□□□□ -0.65
RBFOX2-208ENST00000416721 HSPH1Q92598 858 aa11.01□□□□□ -0.65
RBFOX2-208ENST00000416721 FUBP1Q96AE4 644 aaKnown RBP11.01□□□□□ -0.65
RBFOX2-208ENST00000416721 VOPP1Q96AW1 172 aa11.01□□□□□ -0.65
RBFOX2-208ENST00000416721 TBATAQ96M53 351 aa11.01□□□□□ -0.65
RBFOX2-208ENST00000416721 TUBGCP5Q96RT8 1024 aa11.01□□□□□ -0.65
RBFOX2-208ENST00000416721 KCTD15Q96SI1 283 aaPredicted RBP11.01□□□□□ -0.65
RBFOX2-208ENST00000416721 LGR4Q9BXB1 951 aa11.01□□□□□ -0.65
RBFOX2-208ENST00000416721 FAM117AQ9C073 453 aa11.01□□□□□ -0.65
RBFOX2-208ENST00000416721 LRRC19Q9H756 370 aa11.01□□□□□ -0.65
RBFOX2-208ENST00000416721 CARS2Q9HA77 564 aaKnown RBP11.01□□□□□ -0.65
RBFOX2-208ENST00000416721 RDH14Q9HBH5 336 aa11.01□□□□□ -0.65
RBFOX2-208ENST00000416721 FGF22Q9HCT0 170 aa11.01□□□□□ -0.65
RBFOX2-208ENST00000416721 LMBRD1Q9NUN5 540 aa11.01□□□□□ -0.65
RBFOX2-208ENST00000416721 AKAP7Q9P0M2 348 aaPredicted RBP11.01□□□□□ -0.65
RBFOX2-208ENST00000416721 SEPT10Q9P0V9 454 aa11.01□□□□□ -0.65
RBFOX2-208ENST00000416721 LIMA1Q9UHB6 759 aaKnown RBP11.01□□□□□ -0.65
RBFOX2-208ENST00000416721 PCDHGC4Q9Y5F7 938 aa11.01□□□□□ -0.65
RBFOX2-208ENST00000416721 RNF215Q9Y6U7 377 aa11.01□□□□□ -0.65
RBFOX2-208ENST00000416721 NYNRINQ9P2P1 1898 aaKnown RBP11□□□□□ -0.65
RBFOX2-208ENST00000416721 A0A1W2PQM1 296 aa11□□□□□ -0.65
RBFOX2-208ENST00000416721 WASH4PA8MWX3 477 aa11□□□□□ -0.65
RBFOX2-208ENST00000416721 CDRT15L2A8MXV6 281 aa11□□□□□ -0.65
RBFOX2-208ENST00000416721 GOLGA6L22H0YM25 854 aa11□□□□□ -0.65
RBFOX2-208ENST00000416721 PDE2AO00408 941 aaPredicted RBP11□□□□□ -0.65
RBFOX2-208ENST00000416721 NTN3O00634 580 aaPredicted RBP11□□□□□ -0.65
RBFOX2-208ENST00000416721 FTLP02792 175 aaPredicted RBP11□□□□□ -0.65
RBFOX2-208ENST00000416721 GLB1P16278 677 aa11□□□□□ -0.65
RBFOX2-208ENST00000416721 ERCC2P18074 760 aa11□□□□□ -0.65
RBFOX2-208ENST00000416721 ANP32AP39687 249 aaKnown RBP11□□□□□ -0.65
RBFOX2-208ENST00000416721 GNPDA1P46926 289 aa11□□□□□ -0.65
RBFOX2-208ENST00000416721 PDX1P52945 283 aa11□□□□□ -0.65
RBFOX2-208ENST00000416721 NFATC3Q12968 1075 aa11□□□□□ -0.65
RBFOX2-208ENST00000416721 EIF3IQ13347 325 aaKnown RBP11□□□□□ -0.65
RBFOX2-208ENST00000416721 LBRQ14739 615 aaKnown RBP11□□□□□ -0.65
RBFOX2-208ENST00000416721 ASIC2Q16515 512 aa11□□□□□ -0.65
RBFOX2-208ENST00000416721 MANEAQ5SRI9 462 aa11□□□□□ -0.65
RBFOX2-208ENST00000416721 SPECC1LQ69YQ0 1117 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms