RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 HSPA1AP0DMV8 641 aaKnown RBP14.78□□□□□ -0.04
NCKIPSD-204ENST00000416649 HSPA1BP0DMV9 641 aaKnown RBP14.78□□□□□ -0.04
NCKIPSD-204ENST00000416649 IL7RP16871 459 aa14.78□□□□□ -0.04
NCKIPSD-204ENST00000416649 GHRHRQ02643 423 aa14.78□□□□□ -0.04
NCKIPSD-204ENST00000416649 FPGSQ05932 587 aa14.78□□□□□ -0.04
NCKIPSD-204ENST00000416649 EMC2Q15006 297 aa14.78□□□□□ -0.04
NCKIPSD-204ENST00000416649 MAPRE2Q15555 327 aa14.78□□□□□ -0.04
NCKIPSD-204ENST00000416649 ABHD15Q6UXT9 468 aa14.78□□□□□ -0.04
NCKIPSD-204ENST00000416649 CYS1Q717R9 158 aa14.78□□□□□ -0.04
NCKIPSD-204ENST00000416649 FSTL5Q8N475 847 aaPredicted RBP14.78□□□□□ -0.04
NCKIPSD-204ENST00000416649 PACRGLQ8N7B6 248 aa14.78□□□□□ -0.04
NCKIPSD-204ENST00000416649 PSMA8Q8TAA3 256 aa14.78□□□□□ -0.04
NCKIPSD-204ENST00000416649 MCRS1Q96EZ8 462 aa14.78□□□□□ -0.04
NCKIPSD-204ENST00000416649 VPS39Q96JC1 886 aa14.78□□□□□ -0.04
NCKIPSD-204ENST00000416649 FEM1CQ96JP0 617 aa14.78□□□□□ -0.04
NCKIPSD-204ENST00000416649 WDR12Q9GZL7 423 aaKnown RBP14.78□□□□□ -0.04
NCKIPSD-204ENST00000416649 ARMC1Q9NVT9 282 aa14.78□□□□□ -0.04
NCKIPSD-204ENST00000416649 MORF4L1Q9UBU8 362 aa14.78□□□□□ -0.04
NCKIPSD-204ENST00000416649 MID2Q9UJV3 735 aa14.78□□□□□ -0.04
NCKIPSD-204ENST00000416649 A0A0G2JLL6 359 aaPredicted RBP14.78□□□□□ -0.04
NCKIPSD-204ENST00000416649 DLX3O60479 287 aa14.78□□□□□ -0.04
NCKIPSD-204ENST00000416649 DDHD2O94830 711 aa14.78□□□□□ -0.04
NCKIPSD-204ENST00000416649 TGM1P22735 817 aa14.78□□□□□ -0.04
NCKIPSD-204ENST00000416649 HNRNPFP52597 415 aaKnown RBP14.78□□□□□ -0.04
NCKIPSD-204ENST00000416649 COPZ1P61923 177 aa14.78□□□□□ -0.04
NCKIPSD-204ENST00000416649 MPP1Q00013 466 aa14.78□□□□□ -0.04
NCKIPSD-204ENST00000416649 GRM3Q14832 879 aa14.78□□□□□ -0.04
NCKIPSD-204ENST00000416649 PLEKHG7Q6ZR37 379 aa14.78□□□□□ -0.04
NCKIPSD-204ENST00000416649 CYP2U1Q7Z449 544 aa14.78□□□□□ -0.04
NCKIPSD-204ENST00000416649 PRRT2Q7Z6L0 340 aaPredicted RBP14.78□□□□□ -0.04
NCKIPSD-204ENST00000416649 KDM1BQ8NB78 822 aa14.78□□□□□ -0.04
NCKIPSD-204ENST00000416649 PIF1Q9H611 641 aa14.78□□□□□ -0.04
NCKIPSD-204ENST00000416649 CD320Q9NPF0 282 aa14.78□□□□□ -0.04
NCKIPSD-204ENST00000416649 ABCB10Q9NRK6 738 aa14.78□□□□□ -0.04
NCKIPSD-204ENST00000416649 AGPAT4Q9NRZ5 378 aa14.78□□□□□ -0.04
NCKIPSD-204ENST00000416649 TRPC5OSA6NMA1 111 aa14.77□□□□□ -0.04
NCKIPSD-204ENST00000416649 H0YCG3 227 aa14.77□□□□□ -0.04
NCKIPSD-204ENST00000416649 RNF103O00237 685 aa14.77□□□□□ -0.04
NCKIPSD-204ENST00000416649 NR5A2O00482 541 aa14.77□□□□□ -0.04
NCKIPSD-204ENST00000416649 SEC14L2O76054 403 aa14.77□□□□□ -0.04
NCKIPSD-204ENST00000416649 SUPT20HL2P0C7V6 817 aa14.77□□□□□ -0.04
NCKIPSD-204ENST00000416649 NCK1P16333 377 aa14.77□□□□□ -0.04
NCKIPSD-204ENST00000416649 SDC4P31431 198 aa14.77□□□□□ -0.04
NCKIPSD-204ENST00000416649 SEPHS1P49903 392 aa14.77□□□□□ -0.04
NCKIPSD-204ENST00000416649 PLK1P53350 603 aa14.77□□□□□ -0.04
NCKIPSD-204ENST00000416649 PTPN11Q06124 597 aaPredicted RBP14.77□□□□□ -0.04
NCKIPSD-204ENST00000416649 KCTD2Q14681 263 aa14.77□□□□□ -0.04
NCKIPSD-204ENST00000416649 ATP6AP1Q15904 470 aa14.77□□□□□ -0.04
NCKIPSD-204ENST00000416649 KIF19Q2TAC6 998 aa14.77□□□□□ -0.04
NCKIPSD-204ENST00000416649 CCDC14Q49A88 953 aa14.77□□□□□ -0.04
NCKIPSD-204ENST00000416649 TMTC4Q5T4D3 741 aa14.77□□□□□ -0.04
NCKIPSD-204ENST00000416649 UBE2UQ5VVX9 321 aa14.77□□□□□ -0.04
NCKIPSD-204ENST00000416649 UGT3A1Q6NUS8 523 aa14.77□□□□□ -0.04
NCKIPSD-204ENST00000416649 ITIH5Q86UX2 942 aa14.77□□□□□ -0.04
NCKIPSD-204ENST00000416649 TUBA1CQ9BQE3 449 aa14.77□□□□□ -0.04
NCKIPSD-204ENST00000416649 LHX5Q9H2C1 402 aa14.77□□□□□ -0.04
NCKIPSD-204ENST00000416649 FBRSL1Q9HCM7 1045 aaKnown RBP14.77□□□□□ -0.04
NCKIPSD-204ENST00000416649 A0A0A0MRY4 1105 aa14.77□□□□□ -0.05
NCKIPSD-204ENST00000416649 PTGES3LE9PB15 166 aa14.77□□□□□ -0.05
NCKIPSD-204ENST00000416649 M0R3G1 203 aa14.77□□□□□ -0.05
NCKIPSD-204ENST00000416649 DEAF1O75398 565 aaPredicted RBP14.77□□□□□ -0.05
NCKIPSD-204ENST00000416649 CABYRO75952 493 aa14.77□□□□□ -0.05
NCKIPSD-204ENST00000416649 NADKO95544 446 aaPredicted RBP14.77□□□□□ -0.05
NCKIPSD-204ENST00000416649 DLGAP3O95886 979 aa14.77□□□□□ -0.05
NCKIPSD-204ENST00000416649 EIF2S1P05198 315 aaKnown RBP14.77□□□□□ -0.05
NCKIPSD-204ENST00000416649 YWHAQP27348 245 aa14.77□□□□□ -0.05
NCKIPSD-204ENST00000416649 ENPEPQ07075 957 aa14.77□□□□□ -0.05
NCKIPSD-204ENST00000416649 ANKRD52Q8NB46 1076 aa14.77□□□□□ -0.05
NCKIPSD-204ENST00000416649 CHST13Q8NET6 341 aa14.77□□□□□ -0.05
NCKIPSD-204ENST00000416649 LILRB4Q8NHJ6 448 aa14.77□□□□□ -0.05
NCKIPSD-204ENST00000416649 SPATA17Q96L03 361 aa14.77□□□□□ -0.05
NCKIPSD-204ENST00000416649 SPATA13Q96N96 652 aa14.77□□□□□ -0.05
NCKIPSD-204ENST00000416649 MIR1-1HGQ9H1L0 117 aa14.77□□□□□ -0.05
NCKIPSD-204ENST00000416649 SPC25Q9HBM1 224 aa14.77□□□□□ -0.05
NCKIPSD-204ENST00000416649 TMEM181Q9P2C4 612 aa14.77□□□□□ -0.05
NCKIPSD-204ENST00000416649 TRIM64A6NGJ6 449 aa14.76□□□□□ -0.05
NCKIPSD-204ENST00000416649 TRIM64BA6NI03 449 aa14.76□□□□□ -0.05
NCKIPSD-204ENST00000416649 CNMDO75829 334 aa14.76□□□□□ -0.05
NCKIPSD-204ENST00000416649 RASAL1O95294 804 aa14.76□□□□□ -0.05
NCKIPSD-204ENST00000416649 CPNE6O95741 557 aa14.76□□□□□ -0.05
NCKIPSD-204ENST00000416649 SBK3P0C264 359 aa14.76□□□□□ -0.05
NCKIPSD-204ENST00000416649 TPH1P17752 444 aa14.76□□□□□ -0.05
NCKIPSD-204ENST00000416649 TSPAN8P19075 237 aa14.76□□□□□ -0.05
NCKIPSD-204ENST00000416649 NAB1Q13506 487 aa14.76□□□□□ -0.05
NCKIPSD-204ENST00000416649 TMEM236Q5W0B7 351 aa14.76□□□□□ -0.05
NCKIPSD-204ENST00000416649 CNSTQ6PJW8 725 aa14.76□□□□□ -0.05
NCKIPSD-204ENST00000416649 C4orf22Q6V702 233 aa14.76□□□□□ -0.05
NCKIPSD-204ENST00000416649 PID1Q7Z2X4 250 aa14.76□□□□□ -0.05
NCKIPSD-204ENST00000416649 R3HCC1LQ7Z5L2 792 aaKnown RBP14.76□□□□□ -0.05
NCKIPSD-204ENST00000416649 RNF135Q8IUD6 432 aa14.76□□□□□ -0.05
NCKIPSD-204ENST00000416649 RIOX2Q8IUF8 465 aa14.76□□□□□ -0.05
NCKIPSD-204ENST00000416649 WDR49Q8IV35 697 aa14.76□□□□□ -0.05
NCKIPSD-204ENST00000416649 GLMNQ92990 594 aa14.76□□□□□ -0.05
NCKIPSD-204ENST00000416649 PDZD7Q9H5P4 517 aa14.76□□□□□ -0.05
NCKIPSD-204ENST00000416649 GPN2Q9H9Y4 310 aaPredicted RBP14.76□□□□□ -0.05
NCKIPSD-204ENST00000416649 WDR70Q9NW82 654 aa14.76□□□□□ -0.05
NCKIPSD-204ENST00000416649 DTLQ9NZJ0 730 aa14.76□□□□□ -0.05
NCKIPSD-204ENST00000416649 TBC1D14Q9P2M4 693 aa14.76□□□□□ -0.05
NCKIPSD-204ENST00000416649 BAG5Q9UL15 447 aa14.76□□□□□ -0.05
NCKIPSD-204ENST00000416649 PTPRFP10586 1907 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms