RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 EFHC2Q5JST6 749 aa10.09□□□□□ -0.79
MDC1-202ENST00000416571 SPECC1LQ69YQ0 1117 aa10.09□□□□□ -0.79
MDC1-202ENST00000416571 BRAT1Q6PJG6 821 aa10.09□□□□□ -0.79
MDC1-202ENST00000416571 SLFN11Q7Z7L1 901 aa10.09□□□□□ -0.79
MDC1-202ENST00000416571 PHLDB2Q86SQ0 1253 aa10.09□□□□□ -0.79
MDC1-202ENST00000416571 NOP9Q86U38 636 aaKnown RBP10.09□□□□□ -0.79
MDC1-202ENST00000416571 ZNF677Q86XU0 584 aa10.09□□□□□ -0.79
MDC1-202ENST00000416571 DTX1Q86Y01 620 aa10.09□□□□□ -0.79
MDC1-202ENST00000416571 IRF2BP1Q8IU81 584 aa10.09□□□□□ -0.79
MDC1-202ENST00000416571 IL22RA1Q8N6P7 574 aa10.09□□□□□ -0.79
MDC1-202ENST00000416571 CCDC185Q8N715 623 aa10.09□□□□□ -0.79
MDC1-202ENST00000416571 RTL3Q8N8U3 475 aaKnown RBP10.09□□□□□ -0.79
MDC1-202ENST00000416571 CCDC112Q8NEF3 446 aa10.09□□□□□ -0.79
MDC1-202ENST00000416571 GPT2Q8TD30 523 aa10.09□□□□□ -0.79
MDC1-202ENST00000416571 FAM172AQ8WUF8 416 aa10.09□□□□□ -0.79
MDC1-202ENST00000416571 JPH3Q8WXH2 748 aaPredicted RBP10.09□□□□□ -0.79
MDC1-202ENST00000416571 OR1E3Q8WZA6 343 aa10.09□□□□□ -0.79
MDC1-202ENST00000416571 NTAN1Q96AB6 310 aa10.09□□□□□ -0.79
MDC1-202ENST00000416571 VOPP1Q96AW1 172 aa10.09□□□□□ -0.79
MDC1-202ENST00000416571 RAB6CQ9H0N0 254 aa10.09□□□□□ -0.79
MDC1-202ENST00000416571 ADNPQ9H2P0 1102 aa10.09□□□□□ -0.79
MDC1-202ENST00000416571 CATSPERBQ9H7T0 1116 aa10.09□□□□□ -0.79
MDC1-202ENST00000416571 RDH14Q9HBH5 336 aa10.09□□□□□ -0.79
MDC1-202ENST00000416571 GEMIN8Q9NWZ8 242 aaKnown RBP10.09□□□□□ -0.79
MDC1-202ENST00000416571 KCNK4Q9NYG8 393 aa10.09□□□□□ -0.79
MDC1-202ENST00000416571 LHX3Q9UBR4 397 aa10.09□□□□□ -0.79
MDC1-202ENST00000416571 UBA2Q9UBT2 640 aaPredicted RBP10.09□□□□□ -0.79
MDC1-202ENST00000416571 C2CD3Q4AC94 2353 aa10.09□□□□□ -0.79
MDC1-202ENST00000416571 TSPAN11A1L157 253 aa10.08□□□□□ -0.8
MDC1-202ENST00000416571 TMEM202A6NGA9 273 aa10.08□□□□□ -0.8
MDC1-202ENST00000416571 RHPN2P1A8MT19 583 aa10.08□□□□□ -0.8
MDC1-202ENST00000416571 C9orf172C9J069 976 aa10.08□□□□□ -0.8
MDC1-202ENST00000416571 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.08□□□□□ -0.8
MDC1-202ENST00000416571 PDE2AO00408 941 aaPredicted RBP10.08□□□□□ -0.8
MDC1-202ENST00000416571 CREB3O43889 395 aa10.08□□□□□ -0.8
MDC1-202ENST00000416571 ELFN1P0C7U0 828 aa10.08□□□□□ -0.8
MDC1-202ENST00000416571 SERPINA4P29622 427 aa10.08□□□□□ -0.8
MDC1-202ENST00000416571 ALDH4A1P30038 563 aa10.08□□□□□ -0.8
MDC1-202ENST00000416571 MMP12P39900 470 aa10.08□□□□□ -0.8
MDC1-202ENST00000416571 BECN1Q14457 450 aa10.08□□□□□ -0.8
MDC1-202ENST00000416571 HLTFQ14527 1009 aaKnown RBP eCLIP10.08□□□□□ -0.8
MDC1-202ENST00000416571 C16orf72Q14CZ0 275 aa10.08□□□□□ -0.8
MDC1-202ENST00000416571 TSR1Q2NL82 804 aaKnown RBP10.08□□□□□ -0.8
MDC1-202ENST00000416571 PARP15Q460N3 678 aa10.08□□□□□ -0.8
MDC1-202ENST00000416571 KLHDC7AQ5VTJ3 777 aa10.08□□□□□ -0.8
MDC1-202ENST00000416571 SCYL2Q6P3W7 929 aa10.08□□□□□ -0.8
MDC1-202ENST00000416571 BORAQ6PGQ7 559 aa10.08□□□□□ -0.8
MDC1-202ENST00000416571 OGFOD3Q6PK18 319 aa10.08□□□□□ -0.8
MDC1-202ENST00000416571 NYAP1Q6ZVC0 841 aa10.08□□□□□ -0.8
MDC1-202ENST00000416571 SLITRK4Q8IW52 837 aa10.08□□□□□ -0.8
MDC1-202ENST00000416571 PLA2G15Q8NCC3 412 aa10.08□□□□□ -0.8
MDC1-202ENST00000416571 JOSD2Q8TAC2 188 aa10.08□□□□□ -0.8
MDC1-202ENST00000416571 EPS8L1Q8TE68 723 aa10.08□□□□□ -0.8
MDC1-202ENST00000416571 HTR3CQ8WXA8 447 aa10.08□□□□□ -0.8
MDC1-202ENST00000416571 FUBP1Q96AE4 644 aaKnown RBP10.08□□□□□ -0.8
MDC1-202ENST00000416571 ZNF641Q96N77 438 aaPredicted RBP10.08□□□□□ -0.8
MDC1-202ENST00000416571 C11orf70Q9BRQ4 267 aa10.08□□□□□ -0.8
MDC1-202ENST00000416571 TUBGCP2Q9BSJ2 902 aa10.08□□□□□ -0.8
MDC1-202ENST00000416571 FUCA2Q9BTY2 467 aa10.08□□□□□ -0.8
MDC1-202ENST00000416571 SELENOOQ9BVL4 669 aa10.08□□□□□ -0.8
MDC1-202ENST00000416571 MAGEB5Q9BZ81 275 aa10.08□□□□□ -0.8
MDC1-202ENST00000416571 B3GNT4Q9C0J1 378 aa10.08□□□□□ -0.8
MDC1-202ENST00000416571 ZMYND15Q9H091 742 aa10.08□□□□□ -0.8
MDC1-202ENST00000416571 KLC2Q9H0B6 622 aa10.08□□□□□ -0.8
MDC1-202ENST00000416571 TMEM168Q9H0V1 697 aa10.08□□□□□ -0.8
MDC1-202ENST00000416571 SEMA6CQ9H3T2 930 aa10.08□□□□□ -0.8
MDC1-202ENST00000416571 CYP4F12Q9HCS2 524 aa10.08□□□□□ -0.8
MDC1-202ENST00000416571 FGF22Q9HCT0 170 aa10.08□□□□□ -0.8
MDC1-202ENST00000416571 MRPL40Q9NQ50 206 aaKnown RBP10.08□□□□□ -0.8
MDC1-202ENST00000416571 KIAA1468Q9P260 1216 aa10.08□□□□□ -0.8
MDC1-202ENST00000416571 NEU3Q9UQ49 428 aa10.08□□□□□ -0.8
MDC1-202ENST00000416571 ATP8A1Q9Y2Q0 1164 aa10.08□□□□□ -0.8
MDC1-202ENST00000416571 BOD1L1Q8NFC6 3051 aa10.08□□□□□ -0.8
MDC1-202ENST00000416571 TLN1Q9Y490 2541 aaKnown RBP10.08□□□□□ -0.8
MDC1-202ENST00000416571 NOTCH2Q04721 2471 aa10.07□□□□□ -0.8
MDC1-202ENST00000416571 CFAP69A5D8W1 941 aa10.07□□□□□ -0.8
MDC1-202ENST00000416571 ANKRD62A6NC57 917 aa10.07□□□□□ -0.8
MDC1-202ENST00000416571 C2CD4BA6NLJ0 364 aa10.07□□□□□ -0.8
MDC1-202ENST00000416571 F8VZ95 297 aa10.07□□□□□ -0.8
MDC1-202ENST00000416571 TNFRSF10CO14798 259 aa10.07□□□□□ -0.8
MDC1-202ENST00000416571 HGSO14964 777 aaPredicted RBP10.07□□□□□ -0.8
MDC1-202ENST00000416571 GADD45BO75293 160 aaPredicted RBP10.07□□□□□ -0.8
MDC1-202ENST00000416571 RECQL5O94762 991 aaPredicted RBP10.07□□□□□ -0.8
MDC1-202ENST00000416571 PRKCGP05129 697 aa10.07□□□□□ -0.8
MDC1-202ENST00000416571 KRT3P12035 628 aa10.07□□□□□ -0.8
MDC1-202ENST00000416571 UCHL3P15374 230 aa10.07□□□□□ -0.8
MDC1-202ENST00000416571 WT1P19544 449 aaPredicted RBP10.07□□□□□ -0.8
MDC1-202ENST00000416571 GPD1P21695 349 aa10.07□□□□□ -0.8
MDC1-202ENST00000416571 MMP8P22894 467 aa10.07□□□□□ -0.8
MDC1-202ENST00000416571 STAT1P42224 750 aa10.07□□□□□ -0.8
MDC1-202ENST00000416571 CCR10P46092 362 aa10.07□□□□□ -0.8
MDC1-202ENST00000416571 PPM1FP49593 454 aaPredicted RBP10.07□□□□□ -0.8
MDC1-202ENST00000416571 HDAC4P56524 1084 aa10.07□□□□□ -0.8
MDC1-202ENST00000416571 POLR2LP62875 67 aaKnown RBP10.07□□□□□ -0.8
MDC1-202ENST00000416571 CDR2Q01850 454 aa10.07□□□□□ -0.8
MDC1-202ENST00000416571 ILF3Q12906 894 aaKnown RBP eCLIP10.07□□□□□ -0.8
MDC1-202ENST00000416571 SERINC3Q13530 473 aa10.07□□□□□ -0.8
MDC1-202ENST00000416571 CLCA4Q14CN2 919 aa10.07□□□□□ -0.8
MDC1-202ENST00000416571 CYTH1Q15438 398 aa10.07□□□□□ -0.8
MDC1-202ENST00000416571 CAMK4Q16566 473 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms