RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 MUSKO15146 869 aa17.68■□□□□ 0.42
PDLIM2-208ENST00000416159 CSO75390 466 aaKnown RBP17.68■□□□□ 0.42
PDLIM2-208ENST00000416159 PCCBP05166 539 aa17.68■□□□□ 0.42
PDLIM2-208ENST00000416159 CYP1A2P05177 515 aa17.68■□□□□ 0.42
PDLIM2-208ENST00000416159 TCF4P15884 667 aa17.68■□□□□ 0.42
PDLIM2-208ENST00000416159 SERPINB6P35237 376 aa17.68■□□□□ 0.42
PDLIM2-208ENST00000416159 SRP54P61011 504 aaKnown RBP17.68■□□□□ 0.42
PDLIM2-208ENST00000416159 RALGDSQ12967 914 aa17.68■□□□□ 0.42
PDLIM2-208ENST00000416159 ZNF235Q14590 738 aa17.68■□□□□ 0.42
PDLIM2-208ENST00000416159 ALKBH5Q6P6C2 394 aaKnown RBP17.68■□□□□ 0.42
PDLIM2-208ENST00000416159 LIPIQ6XZB0 460 aa17.68■□□□□ 0.42
PDLIM2-208ENST00000416159 DPPA4Q7L190 304 aa17.68■□□□□ 0.42
PDLIM2-208ENST00000416159 SLC35F3Q8IY50 421 aa17.68■□□□□ 0.42
PDLIM2-208ENST00000416159 LSMEM2Q8N112 164 aa17.68■□□□□ 0.42
PDLIM2-208ENST00000416159 NSMCE1Q8WV22 266 aa17.68■□□□□ 0.42
PDLIM2-208ENST00000416159 TSACCQ96A04 125 aaPredicted RBP17.68■□□□□ 0.42
PDLIM2-208ENST00000416159 GRAMD1AQ96CP6 724 aa17.68■□□□□ 0.42
PDLIM2-208ENST00000416159 WDR92Q96MX6 357 aa17.68■□□□□ 0.42
PDLIM2-208ENST00000416159 NUP85Q9BW27 656 aa17.68■□□□□ 0.42
PDLIM2-208ENST00000416159 PCDH18Q9HCL0 1135 aa17.68■□□□□ 0.42
PDLIM2-208ENST00000416159 ETNK2Q9NVF9 386 aa17.68■□□□□ 0.42
PDLIM2-208ENST00000416159 ANAPC7Q9UJX3 599 aa17.68■□□□□ 0.42
PDLIM2-208ENST00000416159 DSPP15924 2871 aaKnown RBP17.68■□□□□ 0.42
PDLIM2-208ENST00000416159 A0A087X0T9 212 aa17.67■□□□□ 0.42
PDLIM2-208ENST00000416159 MYO1FO00160 1098 aa17.67■□□□□ 0.42
PDLIM2-208ENST00000416159 USP12O75317 370 aa17.67■□□□□ 0.42
PDLIM2-208ENST00000416159 RECQL5O94762 991 aaPredicted RBP17.67■□□□□ 0.42
PDLIM2-208ENST00000416159 TNFP01375 233 aa17.67■□□□□ 0.42
PDLIM2-208ENST00000416159 ELFN1P0C7U0 828 aa17.67■□□□□ 0.42
PDLIM2-208ENST00000416159 FAM228BP0C875 321 aa17.67■□□□□ 0.42
PDLIM2-208ENST00000416159 TGM2P21980 687 aa17.67■□□□□ 0.42
PDLIM2-208ENST00000416159 HADHQ16836 314 aaKnown RBP17.67■□□□□ 0.42
PDLIM2-208ENST00000416159 ALG11Q2TAA5 492 aa17.67■□□□□ 0.42
PDLIM2-208ENST00000416159 TBC1D25Q3MII6 688 aa17.67■□□□□ 0.42
PDLIM2-208ENST00000416159 CCDC122Q5T0U0 273 aa17.67■□□□□ 0.42
PDLIM2-208ENST00000416159 TXNRD3NBQ6F5E7 133 aa17.67■□□□□ 0.42
PDLIM2-208ENST00000416159 RD3Q7Z3Z2 195 aa17.67■□□□□ 0.42
PDLIM2-208ENST00000416159 GKN2Q86XP6 184 aa17.67■□□□□ 0.42
PDLIM2-208ENST00000416159 WDR48Q8TAF3 677 aa17.67■□□□□ 0.42
PDLIM2-208ENST00000416159 SPOCK2Q92563 424 aa17.67■□□□□ 0.42
PDLIM2-208ENST00000416159 BTBD6Q96KE9 485 aa17.67■□□□□ 0.42
PDLIM2-208ENST00000416159 NUDCD1Q96RS6 583 aa17.67■□□□□ 0.42
PDLIM2-208ENST00000416159 KLQ9UEF7 1012 aa17.67■□□□□ 0.42
PDLIM2-208ENST00000416159 PADI4Q9UM07 663 aa17.67■□□□□ 0.42
PDLIM2-208ENST00000416159 OR1A2Q9Y585 309 aa17.67■□□□□ 0.42
PDLIM2-208ENST00000416159 CACNB4O00305 520 aaPredicted RBP17.66■□□□□ 0.42
PDLIM2-208ENST00000416159 HTRA2O43464 458 aaPredicted RBP17.66■□□□□ 0.42
PDLIM2-208ENST00000416159 MAFKO60675 156 aa17.66■□□□□ 0.42
PDLIM2-208ENST00000416159 SOCS5O75159 536 aa17.66■□□□□ 0.42
PDLIM2-208ENST00000416159 TCEA3O75764 348 aa17.66■□□□□ 0.42
PDLIM2-208ENST00000416159 PEX11BO96011 259 aa17.66■□□□□ 0.42
PDLIM2-208ENST00000416159 HOXC4P09017 264 aaPredicted RBP17.66■□□□□ 0.42
PDLIM2-208ENST00000416159 CR2P20023 1033 aa17.66■□□□□ 0.42
PDLIM2-208ENST00000416159 PTMSP20962 102 aa17.66■□□□□ 0.42
PDLIM2-208ENST00000416159 KELP23276 732 aa17.66■□□□□ 0.42
PDLIM2-208ENST00000416159 NFKBIAP25963 317 aa17.66■□□□□ 0.42
PDLIM2-208ENST00000416159 ITPKBP27987 946 aa17.66■□□□□ 0.42
PDLIM2-208ENST00000416159 LSSP48449 732 aa17.66■□□□□ 0.42
PDLIM2-208ENST00000416159 CDH6P55285 790 aa17.66■□□□□ 0.42
PDLIM2-208ENST00000416159 KIAA1024LP59773 190 aa17.66■□□□□ 0.42
PDLIM2-208ENST00000416159 SLC25A11Q02978 314 aaKnown RBP17.66■□□□□ 0.42
PDLIM2-208ENST00000416159 KRT81Q14533 505 aa17.66■□□□□ 0.42
PDLIM2-208ENST00000416159 ISXQ2M1V0 245 aa17.66■□□□□ 0.42
PDLIM2-208ENST00000416159 RALGPS1Q5JS13 557 aa17.66■□□□□ 0.42
PDLIM2-208ENST00000416159 PERM1Q5SV97 790 aa17.66■□□□□ 0.42
PDLIM2-208ENST00000416159 LRRC49Q8IUZ0 686 aa17.66■□□□□ 0.42
PDLIM2-208ENST00000416159 ATPAF2Q8N5M1 289 aa17.66■□□□□ 0.42
PDLIM2-208ENST00000416159 NSMCE3Q96MG7 304 aa17.66■□□□□ 0.42
PDLIM2-208ENST00000416159 ZNF578Q96N58 590 aaPredicted RBP17.66■□□□□ 0.42
PDLIM2-208ENST00000416159 POLR1BQ9H9Y6 1135 aa17.66■□□□□ 0.42
PDLIM2-208ENST00000416159 KCTD5Q9NXV2 234 aa17.66■□□□□ 0.42
PDLIM2-208ENST00000416159 IFNKQ9P0W0 207 aa17.66■□□□□ 0.42
PDLIM2-208ENST00000416159 RCOR3Q9P2K3 495 aaPredicted RBP17.66■□□□□ 0.42
PDLIM2-208ENST00000416159 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.66■□□□□ 0.42
PDLIM2-208ENST00000416159 DGKBQ9Y6T7 804 aa17.66■□□□□ 0.42
PDLIM2-208ENST00000416159 DXOO77932 396 aaKnown RBP17.65■□□□□ 0.42
PDLIM2-208ENST00000416159 TPM3P06753 285 aa17.65■□□□□ 0.42
PDLIM2-208ENST00000416159 CELA2BP08218 269 aaPredicted RBP17.65■□□□□ 0.42
PDLIM2-208ENST00000416159 HOXB3P14651 431 aaPredicted RBP17.65■□□□□ 0.42
PDLIM2-208ENST00000416159 GABREP78334 506 aa17.65■□□□□ 0.42
PDLIM2-208ENST00000416159 ACOX1Q15067 660 aa17.65■□□□□ 0.42
PDLIM2-208ENST00000416159 MARC1Q5VT66 337 aa17.65■□□□□ 0.42
PDLIM2-208ENST00000416159 RBM44Q6ZP01 1051 aaKnown RBP17.65■□□□□ 0.42
PDLIM2-208ENST00000416159 PGBD5Q8N414 524 aa17.65■□□□□ 0.42
PDLIM2-208ENST00000416159 ARL10Q8N8L6 244 aa17.65■□□□□ 0.42
PDLIM2-208ENST00000416159 PLA2G15Q8NCC3 412 aa17.65■□□□□ 0.42
PDLIM2-208ENST00000416159 MGME1Q9BQP7 344 aa17.65■□□□□ 0.42
PDLIM2-208ENST00000416159 GULP1Q9UBP9 304 aa17.65■□□□□ 0.42
PDLIM2-208ENST00000416159 B4GALT6Q9UBX8 382 aa17.65■□□□□ 0.42
PDLIM2-208ENST00000416159 PHTF1Q9UMS5 762 aa17.65■□□□□ 0.42
PDLIM2-208ENST00000416159 PCDHGC4Q9Y5F7 938 aa17.65■□□□□ 0.42
PDLIM2-208ENST00000416159 TTC24A2A3L6 582 aaPredicted RBP17.64■□□□□ 0.41
PDLIM2-208ENST00000416159 A8MX80 341 aa17.64■□□□□ 0.41
PDLIM2-208ENST00000416159 PDE2AO00408 941 aaPredicted RBP17.64■□□□□ 0.41
PDLIM2-208ENST00000416159 TNFRSF10CO14798 259 aa17.64■□□□□ 0.41
PDLIM2-208ENST00000416159 CPP00450 1065 aa17.64■□□□□ 0.41
PDLIM2-208ENST00000416159 GYPCP04921 128 aa17.64■□□□□ 0.41
PDLIM2-208ENST00000416159 MPOP05164 745 aa17.64■□□□□ 0.41
PDLIM2-208ENST00000416159 CYP2A6P11509 494 aaPredicted RBP17.64■□□□□ 0.41
PDLIM2-208ENST00000416159 GM2AP17900 193 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms