RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 TRIM23P36406 574 aa15.49■□□□□ 0.07
DDX56-202ENST00000415758 GSCP56915 257 aaPredicted RBP15.49■□□□□ 0.07
DDX56-202ENST00000415758 NFKB2Q00653 900 aa15.49■□□□□ 0.07
DDX56-202ENST00000415758 TPD52L1Q16890 204 aaPredicted RBP15.49■□□□□ 0.07
DDX56-202ENST00000415758 TMPRSS9Q7Z410 1059 aa15.49■□□□□ 0.07
DDX56-202ENST00000415758 SLFN11Q7Z7L1 901 aa15.49■□□□□ 0.07
DDX56-202ENST00000415758 ZNF354CQ86Y25 554 aa15.49■□□□□ 0.07
DDX56-202ENST00000415758 NETO2Q8NC67 525 aa15.49■□□□□ 0.07
DDX56-202ENST00000415758 PLA2G15Q8NCC3 412 aa15.49■□□□□ 0.07
DDX56-202ENST00000415758 FAM46DQ8NEK8 389 aa15.49■□□□□ 0.07
DDX56-202ENST00000415758 FAM172AQ8WUF8 416 aa15.49■□□□□ 0.07
DDX56-202ENST00000415758 OR1E3Q8WZA6 343 aa15.49■□□□□ 0.07
DDX56-202ENST00000415758 FUBP1Q96AE4 644 aaKnown RBP15.49■□□□□ 0.07
DDX56-202ENST00000415758 TUBGCP5Q96RT8 1024 aa15.49■□□□□ 0.07
DDX56-202ENST00000415758 GEMIN8Q9NWZ8 242 aaKnown RBP15.49■□□□□ 0.07
DDX56-202ENST00000415758 ATP8A1Q9Y2Q0 1164 aa15.49■□□□□ 0.07
DDX56-202ENST00000415758 BUB1BO60566 1050 aaPredicted RBP15.48■□□□□ 0.07
DDX56-202ENST00000415758 PPFIA2O75334 1257 aa15.48■□□□□ 0.07
DDX56-202ENST00000415758 KRT3P12035 628 aa15.48■□□□□ 0.07
DDX56-202ENST00000415758 CHRNB2P17787 502 aa15.48■□□□□ 0.07
DDX56-202ENST00000415758 KELP23276 732 aa15.48■□□□□ 0.07
DDX56-202ENST00000415758 RFC1P35251 1148 aaPredicted RBP15.48■□□□□ 0.07
DDX56-202ENST00000415758 CSNK1DP48730 415 aa15.48■□□□□ 0.07
DDX56-202ENST00000415758 B4GALNT1Q00973 533 aa15.48■□□□□ 0.07
DDX56-202ENST00000415758 FMO1Q01740 532 aa15.48■□□□□ 0.07
DDX56-202ENST00000415758 CDR2Q01850 454 aa15.48■□□□□ 0.07
DDX56-202ENST00000415758 PTP4A2Q12974 167 aa15.48■□□□□ 0.07
DDX56-202ENST00000415758 ARHGEF7Q14155 803 aa15.48■□□□□ 0.07
DDX56-202ENST00000415758 CAMK4Q16566 473 aa15.48■□□□□ 0.07
DDX56-202ENST00000415758 CLPPQ16740 277 aaPredicted RBP15.48■□□□□ 0.07
DDX56-202ENST00000415758 COLEC12Q5KU26 742 aa15.48■□□□□ 0.07
DDX56-202ENST00000415758 ZNF574Q6ZN55 896 aaPredicted RBP15.48■□□□□ 0.07
DDX56-202ENST00000415758 TAF8Q7Z7C8 310 aa15.48■□□□□ 0.07
DDX56-202ENST00000415758 VASH2Q86V25 355 aa15.48■□□□□ 0.07
DDX56-202ENST00000415758 C17orf82Q86X59 251 aaPredicted RBP15.48■□□□□ 0.07
DDX56-202ENST00000415758 PYROXD2Q8N2H3 581 aa15.48■□□□□ 0.07
DDX56-202ENST00000415758 SLC20A1Q8WUM9 679 aa15.48■□□□□ 0.07
DDX56-202ENST00000415758 HTR3CQ8WXA8 447 aa15.48■□□□□ 0.07
DDX56-202ENST00000415758 EXOC2Q96KP1 924 aa15.48■□□□□ 0.07
DDX56-202ENST00000415758 NCAPGQ9BPX3 1015 aa15.48■□□□□ 0.07
DDX56-202ENST00000415758 FUCA2Q9BTY2 467 aa15.48■□□□□ 0.07
DDX56-202ENST00000415758 SLC25A18Q9H1K4 315 aa15.48■□□□□ 0.07
DDX56-202ENST00000415758 PDFQ9HBH1 243 aa15.48■□□□□ 0.07
DDX56-202ENST00000415758 FGF22Q9HCT0 170 aa15.48■□□□□ 0.07
DDX56-202ENST00000415758 CACNB4O00305 520 aaPredicted RBP15.47■□□□□ 0.07
DDX56-202ENST00000415758 B4GAT1O43505 415 aa15.47■□□□□ 0.07
DDX56-202ENST00000415758 CPNE6O95741 557 aa15.47■□□□□ 0.07
DDX56-202ENST00000415758 PCCBP05166 539 aa15.47■□□□□ 0.07
DDX56-202ENST00000415758 UNGP13051 313 aaPredicted RBP15.47■□□□□ 0.07
DDX56-202ENST00000415758 MAPK10P53779 464 aa15.47■□□□□ 0.07
DDX56-202ENST00000415758 AIF1P55008 147 aa15.47■□□□□ 0.07
DDX56-202ENST00000415758 C16orf72Q14CZ0 275 aa15.47■□□□□ 0.07
DDX56-202ENST00000415758 SDK2Q58EX2 2172 aa15.47■□□□□ 0.07
DDX56-202ENST00000415758 EFHC2Q5JST6 749 aa15.47■□□□□ 0.07
DDX56-202ENST00000415758 TMEM164Q5U3C3 297 aa15.47■□□□□ 0.07
DDX56-202ENST00000415758 WDR59Q6PJI9 974 aa15.47■□□□□ 0.07
DDX56-202ENST00000415758 TRIM72Q6ZMU5 477 aa15.47■□□□□ 0.07
DDX56-202ENST00000415758 PHLDB2Q86SQ0 1253 aa15.47■□□□□ 0.07
DDX56-202ENST00000415758 PIM3Q86V86 326 aa15.47■□□□□ 0.07
DDX56-202ENST00000415758 ZSWIM9Q86XI8 627 aa15.47■□□□□ 0.07
DDX56-202ENST00000415758 SFTPA2Q8IWL1 248 aa15.47■□□□□ 0.07
DDX56-202ENST00000415758 SLC30A5Q8TAD4 765 aa15.47■□□□□ 0.07
DDX56-202ENST00000415758 ECHDC3Q96DC8 303 aa15.47■□□□□ 0.07
DDX56-202ENST00000415758 C11orf70Q9BRQ4 267 aa15.47■□□□□ 0.07
DDX56-202ENST00000415758 SLC12A9Q9BXP2 914 aa15.47■□□□□ 0.07
DDX56-202ENST00000415758 TMEM168Q9H0V1 697 aa15.47■□□□□ 0.07
DDX56-202ENST00000415758 ADNPQ9H2P0 1102 aa15.47■□□□□ 0.07
DDX56-202ENST00000415758 SEMA6CQ9H3T2 930 aa15.47■□□□□ 0.07
DDX56-202ENST00000415758 DPEP2Q9H4A9 486 aa15.47■□□□□ 0.07
DDX56-202ENST00000415758 LRRC19Q9H756 370 aa15.47■□□□□ 0.07
DDX56-202ENST00000415758 CATSPERBQ9H7T0 1116 aa15.47■□□□□ 0.07
DDX56-202ENST00000415758 UBA2Q9UBT2 640 aaPredicted RBP15.47■□□□□ 0.07
DDX56-202ENST00000415758 FLNCQ14315 2725 aa15.47■□□□□ 0.07
DDX56-202ENST00000415758 DOPEY2Q9Y3R5 2298 aa15.46■□□□□ 0.07
DDX56-202ENST00000415758 HGSO14964 777 aaPredicted RBP15.46■□□□□ 0.07
DDX56-202ENST00000415758 RECQL5O94762 991 aaPredicted RBP15.46■□□□□ 0.07
DDX56-202ENST00000415758 GPD1P21695 349 aa15.46■□□□□ 0.07
DDX56-202ENST00000415758 ERCC5P28715 1186 aaPredicted RBP15.46■□□□□ 0.07
DDX56-202ENST00000415758 STAT1P42224 750 aa15.46■□□□□ 0.07
DDX56-202ENST00000415758 CYP4F2P78329 520 aa15.46■□□□□ 0.07
DDX56-202ENST00000415758 RALGDSQ12967 914 aa15.46■□□□□ 0.07
DDX56-202ENST00000415758 BECN1Q14457 450 aa15.46■□□□□ 0.07
DDX56-202ENST00000415758 NR1D2Q14995 579 aa15.46■□□□□ 0.07
DDX56-202ENST00000415758 CLCA4Q14CN2 919 aa15.46■□□□□ 0.07
DDX56-202ENST00000415758 TSR1Q2NL82 804 aaKnown RBP15.46■□□□□ 0.07
DDX56-202ENST00000415758 PHF19Q5T6S3 580 aa15.46■□□□□ 0.07
DDX56-202ENST00000415758 AFMIDQ63HM1 303 aa15.46■□□□□ 0.07
DDX56-202ENST00000415758 SPECC1LQ69YQ0 1117 aa15.46■□□□□ 0.07
DDX56-202ENST00000415758 LIPIQ6XZB0 460 aa15.46■□□□□ 0.07
DDX56-202ENST00000415758 ZNF438Q7Z4V0 828 aa15.46■□□□□ 0.07
DDX56-202ENST00000415758 CAMK1DQ8IU85 385 aa15.46■□□□□ 0.07
DDX56-202ENST00000415758 CCL4L1Q8NHW4 92 aa15.46■□□□□ 0.07
DDX56-202ENST00000415758 GPBAR1Q8TDU6 330 aa15.46■□□□□ 0.07
DDX56-202ENST00000415758 MRPL40Q9NQ50 206 aaKnown RBP15.46■□□□□ 0.07
DDX56-202ENST00000415758 AKAP7Q9P0M2 348 aaPredicted RBP15.46■□□□□ 0.07
DDX56-202ENST00000415758 PCDHGA3Q9Y5H0 932 aa15.46■□□□□ 0.07
DDX56-202ENST00000415758 SIGLEC16A6NMB1 481 aa15.45■□□□□ 0.06
DDX56-202ENST00000415758 B4DGG1 531 aa15.45■□□□□ 0.06
DDX56-202ENST00000415758 STMND1H3BQB6 276 aa15.45■□□□□ 0.06
DDX56-202ENST00000415758 PDE2AO00408 941 aaPredicted RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms