RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 ZNF185O15231 689 aa20.64■□□□□ 0.9
PTPRU-203ENST00000415600 CYP1A2P05177 515 aa20.64■□□□□ 0.9
PTPRU-203ENST00000415600 JUNDP17535 347 aa20.64■□□□□ 0.9
PTPRU-203ENST00000415600 SERPINA4P29622 427 aa20.64■□□□□ 0.9
PTPRU-203ENST00000415600 MIPP30301 263 aa20.64■□□□□ 0.9
PTPRU-203ENST00000415600 HCAR3P49019 387 aa20.64■□□□□ 0.9
PTPRU-203ENST00000415600 PFN3P60673 137 aa20.64■□□□□ 0.9
PTPRU-203ENST00000415600 ZNF542PQ5EBM4 170 aa20.64■□□□□ 0.9
PTPRU-203ENST00000415600 ZFYVE26Q68DK2 2539 aa20.64■□□□□ 0.9
PTPRU-203ENST00000415600 ZNF548Q8NEK5 533 aaPredicted RBP20.64■□□□□ 0.9
PTPRU-203ENST00000415600 COG1Q8WTW3 980 aa20.64■□□□□ 0.9
PTPRU-203ENST00000415600 CENPTQ96BT3 561 aa20.64■□□□□ 0.9
PTPRU-203ENST00000415600 CELF6Q96J87 481 aaKnown RBP20.64■□□□□ 0.9
PTPRU-203ENST00000415600 IL12RB2Q99665 862 aa20.64■□□□□ 0.9
PTPRU-203ENST00000415600 SNRNP25Q9BV90 132 aaKnown RBP20.64■□□□□ 0.9
PTPRU-203ENST00000415600 CINPQ9BW66 212 aaPredicted RBP20.64■□□□□ 0.9
PTPRU-203ENST00000415600 SLC13A1Q9BZW2 595 aa20.64■□□□□ 0.9
PTPRU-203ENST00000415600 KLC2Q9H0B6 622 aa20.64■□□□□ 0.9
PTPRU-203ENST00000415600 GPATCH2LQ9NWQ4 482 aa20.64■□□□□ 0.9
PTPRU-203ENST00000415600 LHX3Q9UBR4 397 aa20.64■□□□□ 0.9
PTPRU-203ENST00000415600 RNF14Q9UBS8 474 aa20.64■□□□□ 0.9
PTPRU-203ENST00000415600 URB1O60287 2271 aaKnown RBP20.64■□□□□ 0.89
PTPRU-203ENST00000415600 TMEM110-MUSTN1A8MSY1 372 aa20.63■□□□□ 0.89
PTPRU-203ENST00000415600 CES2O00748 559 aa20.63■□□□□ 0.89
PTPRU-203ENST00000415600 AQP9O43315 295 aa20.63■□□□□ 0.89
PTPRU-203ENST00000415600 MMP20O60882 483 aa20.63■□□□□ 0.89
PTPRU-203ENST00000415600 TIMP2P16035 220 aa20.63■□□□□ 0.89
PTPRU-203ENST00000415600 HTR1BP28222 390 aa20.63■□□□□ 0.89
PTPRU-203ENST00000415600 PCK1P35558 622 aa20.63■□□□□ 0.89
PTPRU-203ENST00000415600 ARL4AP40617 200 aa20.63■□□□□ 0.89
PTPRU-203ENST00000415600 CSNK1DP48730 415 aa20.63■□□□□ 0.89
PTPRU-203ENST00000415600 RPIAP49247 311 aa20.63■□□□□ 0.89
PTPRU-203ENST00000415600 PAPOLAP51003 745 aaKnown RBP20.63■□□□□ 0.89
PTPRU-203ENST00000415600 BLKP51451 505 aa20.63■□□□□ 0.89
PTPRU-203ENST00000415600 RENBPP51606 427 aa20.63■□□□□ 0.89
PTPRU-203ENST00000415600 POLR2LP62875 67 aaKnown RBP20.63■□□□□ 0.89
PTPRU-203ENST00000415600 RPS6KA1Q15418 735 aa20.63■□□□□ 0.89
PTPRU-203ENST00000415600 CYTH1Q15438 398 aa20.63■□□□□ 0.89
PTPRU-203ENST00000415600 TMCO4Q5TGY1 634 aa20.63■□□□□ 0.89
PTPRU-203ENST00000415600 DAAM2Q86T65 1068 aa20.63■□□□□ 0.89
PTPRU-203ENST00000415600 ATL2Q8NHH9 583 aa20.63■□□□□ 0.89
PTPRU-203ENST00000415600 EXOC2Q96KP1 924 aa20.63■□□□□ 0.89
PTPRU-203ENST00000415600 APOLD1Q96LR9 279 aa20.63■□□□□ 0.89
PTPRU-203ENST00000415600 CTTNBP2NLQ9P2B4 639 aa20.63■□□□□ 0.89
PTPRU-203ENST00000415600 GGT7Q9UJ14 662 aa20.63■□□□□ 0.89
PTPRU-203ENST00000415600 H3BRJ5 948 aa20.63■□□□□ 0.89
PTPRU-203ENST00000415600 K7ESM1 405 aa20.63■□□□□ 0.89
PTPRU-203ENST00000415600 DFFAO00273 331 aa20.63■□□□□ 0.89
PTPRU-203ENST00000415600 TPP1O14773 563 aa20.63■□□□□ 0.89
PTPRU-203ENST00000415600 BUB1BO60566 1050 aaPredicted RBP20.63■□□□□ 0.89
PTPRU-203ENST00000415600 LRRC14Q15048 493 aa20.63■□□□□ 0.89
PTPRU-203ENST00000415600 UGP2Q16851 508 aa20.63■□□□□ 0.89
PTPRU-203ENST00000415600 TMEM52BQ4KMG9 183 aa20.63■□□□□ 0.89
PTPRU-203ENST00000415600 BOLA3Q53S33 107 aa20.63■□□□□ 0.89
PTPRU-203ENST00000415600 PEX26Q7Z412 305 aa20.63■□□□□ 0.89
PTPRU-203ENST00000415600 NT5DC3Q86UY8 548 aa20.63■□□□□ 0.89
PTPRU-203ENST00000415600 UBE2Q2Q8WVN8 375 aa20.63■□□□□ 0.89
PTPRU-203ENST00000415600 TBATAQ96M53 351 aa20.63■□□□□ 0.89
PTPRU-203ENST00000415600 WRAP53Q9BUR4 548 aaKnown RBP20.63■□□□□ 0.89
PTPRU-203ENST00000415600 PDFQ9HBH1 243 aa20.63■□□□□ 0.89
PTPRU-203ENST00000415600 DSPP15924 2871 aaKnown RBP20.62■□□□□ 0.89
PTPRU-203ENST00000415600 TSPAN11A1L157 253 aa20.62■□□□□ 0.89
PTPRU-203ENST00000415600 PDE2AO00408 941 aaPredicted RBP20.62■□□□□ 0.89
PTPRU-203ENST00000415600 ERCC2P18074 760 aa20.62■□□□□ 0.89
PTPRU-203ENST00000415600 NFKBIAP25963 317 aa20.62■□□□□ 0.89
PTPRU-203ENST00000415600 INSM1Q01101 510 aaPredicted RBP20.62■□□□□ 0.89
PTPRU-203ENST00000415600 IL10RBQ08334 325 aa20.62■□□□□ 0.89
PTPRU-203ENST00000415600 PIGHQ14442 188 aaPredicted RBP20.62■□□□□ 0.89
PTPRU-203ENST00000415600 LRRC73Q5JTD7 316 aa20.62■□□□□ 0.89
PTPRU-203ENST00000415600 C11orf63Q6NUN7 778 aa20.62■□□□□ 0.89
PTPRU-203ENST00000415600 BBS5Q8N3I7 341 aa20.62■□□□□ 0.89
PTPRU-203ENST00000415600 DCBLD1Q8N8Z6 715 aa20.62■□□□□ 0.89
PTPRU-203ENST00000415600 LMX1AQ8TE12 382 aa20.62■□□□□ 0.89
PTPRU-203ENST00000415600 SCG3Q8WXD2 468 aaKnown RBP20.62■□□□□ 0.89
PTPRU-203ENST00000415600 DEPDC7Q96QD5 511 aa20.62■□□□□ 0.89
PTPRU-203ENST00000415600 KCTD15Q96SI1 283 aaPredicted RBP20.62■□□□□ 0.89
PTPRU-203ENST00000415600 SLC39A8Q9C0K1 460 aa20.62■□□□□ 0.89
PTPRU-203ENST00000415600 GOLPH3Q9H4A6 298 aa20.62■□□□□ 0.89
PTPRU-203ENST00000415600 UVRAGQ9P2Y5 699 aa20.62■□□□□ 0.89
PTPRU-203ENST00000415600 APOBEC3BQ9UH17 382 aaKnown RBP20.62■□□□□ 0.89
PTPRU-203ENST00000415600 AMFRQ9UKV5 643 aa20.62■□□□□ 0.89
PTPRU-203ENST00000415600 PACSIN2Q9UNF0 486 aaPredicted RBP20.62■□□□□ 0.89
PTPRU-203ENST00000415600 J3KR12 359 aa20.61■□□□□ 0.89
PTPRU-203ENST00000415600 SPINT1O43278 529 aa20.61■□□□□ 0.89
PTPRU-203ENST00000415600 LRCH4O75427 683 aa20.61■□□□□ 0.89
PTPRU-203ENST00000415600 PIGNO95427 931 aa20.61■□□□□ 0.89
PTPRU-203ENST00000415600 MT-CO3P00414 261 aa20.61■□□□□ 0.89
PTPRU-203ENST00000415600 PEX5P50542 639 aa20.61■□□□□ 0.89
PTPRU-203ENST00000415600 BCL2L1Q07817 233 aa20.61■□□□□ 0.89
PTPRU-203ENST00000415600 NSUN2Q08J23 767 aaKnown RBP eCLIP20.61■□□□□ 0.89
PTPRU-203ENST00000415600 RTP5Q14D33 572 aa20.61■□□□□ 0.89
PTPRU-203ENST00000415600 FAXCQ5TGI0 409 aa20.61■□□□□ 0.89
PTPRU-203ENST00000415600 MACC1Q6ZN28 852 aa20.61■□□□□ 0.89
PTPRU-203ENST00000415600 LRRC69Q6ZNQ3 347 aa20.61■□□□□ 0.89
PTPRU-203ENST00000415600 SRLQ86TD4 932 aa20.61■□□□□ 0.89
PTPRU-203ENST00000415600 NSMCE1Q8WV22 266 aa20.61■□□□□ 0.89
PTPRU-203ENST00000415600 SEPT3Q9UH03 358 aa20.61■□□□□ 0.89
PTPRU-203ENST00000415600 CACNA1GO43497 2377 aa20.6■□□□□ 0.89
PTPRU-203ENST00000415600 TDRD6O60522 2096 aaKnown RBP20.6■□□□□ 0.89
PTPRU-203ENST00000415600 CFAP69A5D8W1 941 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms