RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 TCHHL1Q5QJ38 904 aaPredicted RBP20.52■□□□□ 0.87
AP1S3-205ENST00000415298 GTF2IRD2BQ6EKJ0 949 aa20.52■□□□□ 0.87
AP1S3-205ENST00000415298 GTF2IRD2Q86UP8 949 aa20.52■□□□□ 0.87
AP1S3-205ENST00000415298 HPS6Q86YV9 775 aa20.52■□□□□ 0.87
AP1S3-205ENST00000415298 FBXW8Q8N3Y1 598 aa20.52■□□□□ 0.87
AP1S3-205ENST00000415298 WWP1Q9H0M0 922 aa20.52■□□□□ 0.87
AP1S3-205ENST00000415298 GHITMQ9H3K2 345 aa20.52■□□□□ 0.87
AP1S3-205ENST00000415298 STN1Q9H668 368 aaKnown RBP20.52■□□□□ 0.87
AP1S3-205ENST00000415298 ADPRHL2Q9NX46 363 aa20.52■□□□□ 0.87
AP1S3-205ENST00000415298 TOR4AQ9NXH8 423 aa20.52■□□□□ 0.87
AP1S3-205ENST00000415298 DPP7Q9UHL4 492 aa20.52■□□□□ 0.87
AP1S3-205ENST00000415298 NENFQ9UMX5 172 aa20.52■□□□□ 0.87
AP1S3-205ENST00000415298 WBP11Q9Y2W2 641 aaKnown RBP20.52■□□□□ 0.87
AP1S3-205ENST00000415298 VWA7Q9Y334 891 aa20.52■□□□□ 0.87
AP1S3-205ENST00000415298 PI4K2BG5E9Z4 385 aa20.51■□□□□ 0.87
AP1S3-205ENST00000415298 PLK4O00444 970 aa20.51■□□□□ 0.87
AP1S3-205ENST00000415298 SLC16A3O15427 465 aaKnown RBP20.51■□□□□ 0.87
AP1S3-205ENST00000415298 TALDO1P37837 337 aa20.51■□□□□ 0.87
AP1S3-205ENST00000415298 HARS2P49590 506 aaKnown RBP20.51■□□□□ 0.87
AP1S3-205ENST00000415298 ST13P50502 369 aaKnown RBP20.51■□□□□ 0.87
AP1S3-205ENST00000415298 ESCO2Q56NI9 601 aa20.51■□□□□ 0.87
AP1S3-205ENST00000415298 ATG16L1Q676U5 607 aa20.51■□□□□ 0.87
AP1S3-205ENST00000415298 ANKRD33Q7Z3H0 272 aa20.51■□□□□ 0.87
AP1S3-205ENST00000415298 SLC35C1Q96A29 364 aa20.51■□□□□ 0.87
AP1S3-205ENST00000415298 TMEM80Q96HE8 168 aa20.51■□□□□ 0.87
AP1S3-205ENST00000415298 AKIP1Q9NQ31 210 aa20.51■□□□□ 0.87
AP1S3-205ENST00000415298 PADI3Q9ULW8 664 aa20.51■□□□□ 0.87
AP1S3-205ENST00000415298 TOR1AO14656 332 aa20.51■□□□□ 0.87
AP1S3-205ENST00000415298 TM9SF1O15321 606 aa20.51■□□□□ 0.87
AP1S3-205ENST00000415298 IFNA14P01570 189 aa20.51■□□□□ 0.87
AP1S3-205ENST00000415298 HMGN1P05114 100 aa20.51■□□□□ 0.87
AP1S3-205ENST00000415298 MAPKAPK2P49137 400 aa20.51■□□□□ 0.87
AP1S3-205ENST00000415298 TMBIM6P55061 237 aa20.51■□□□□ 0.87
AP1S3-205ENST00000415298 JAM2P57087 298 aa20.51■□□□□ 0.87
AP1S3-205ENST00000415298 GPNMBQ14956 572 aa20.51■□□□□ 0.87
AP1S3-205ENST00000415298 ALKBH2Q6NS38 261 aa20.51■□□□□ 0.87
AP1S3-205ENST00000415298 KIAA0408Q6ZU52 694 aa20.51■□□□□ 0.87
AP1S3-205ENST00000415298 LRRC20Q8TCA0 184 aa20.51■□□□□ 0.87
AP1S3-205ENST00000415298 ALG3Q92685 438 aa20.51■□□□□ 0.87
AP1S3-205ENST00000415298 CCDC120Q96HB5 630 aa20.51■□□□□ 0.87
AP1S3-205ENST00000415298 RNF19AQ9NV58 838 aa20.51■□□□□ 0.87
AP1S3-205ENST00000415298 MAT2BQ9NZL9 334 aa20.51■□□□□ 0.87
AP1S3-205ENST00000415298 SORCS3Q9UPU3 1222 aa20.51■□□□□ 0.87
AP1S3-205ENST00000415298 DEAF1O75398 565 aaPredicted RBP20.5■□□□□ 0.87
AP1S3-205ENST00000415298 EEF1DP29692 281 aaKnown RBP20.5■□□□□ 0.87
AP1S3-205ENST00000415298 GRIA3P42263 894 aa20.5■□□□□ 0.87
AP1S3-205ENST00000415298 KCNH2Q12809 1159 aa20.5■□□□□ 0.87
AP1S3-205ENST00000415298 FBXO43Q4G163 708 aa20.5■□□□□ 0.87
AP1S3-205ENST00000415298 C1orf220Q5T0J3 134 aa20.5■□□□□ 0.87
AP1S3-205ENST00000415298 GSTA5Q7RTV2 222 aa20.5■□□□□ 0.87
AP1S3-205ENST00000415298 IRF2BP2Q7Z5L9 587 aa20.5■□□□□ 0.87
AP1S3-205ENST00000415298 GALNT12Q8IXK2 581 aa20.5■□□□□ 0.87
AP1S3-205ENST00000415298 ZDHHC14Q8IZN3 488 aa20.5■□□□□ 0.87
AP1S3-205ENST00000415298 ZNF597Q96LX8 424 aa20.5■□□□□ 0.87
AP1S3-205ENST00000415298 CXCL16Q9H2A7 254 aa20.5■□□□□ 0.87
AP1S3-205ENST00000415298 RPRD1BQ9NQG5 326 aaKnown RBP20.5■□□□□ 0.87
AP1S3-205ENST00000415298 SLC39A1Q9NY26 324 aa20.5■□□□□ 0.87
AP1S3-205ENST00000415298 CPNE7Q9UBL6 633 aa20.5■□□□□ 0.87
AP1S3-205ENST00000415298 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP20.5■□□□□ 0.87
AP1S3-205ENST00000415298 SNX8Q9Y5X2 465 aa20.5■□□□□ 0.87
AP1S3-205ENST00000415298 A0A0G2JMP0 313 aa20.5■□□□□ 0.87
AP1S3-205ENST00000415298 SLITRK5O94991 958 aa20.5■□□□□ 0.87
AP1S3-205ENST00000415298 ACAT1P24752 427 aaKnown RBP20.5■□□□□ 0.87
AP1S3-205ENST00000415298 ARNTP27540 789 aa20.5■□□□□ 0.87
AP1S3-205ENST00000415298 HTR2BP41595 481 aa20.5■□□□□ 0.87
AP1S3-205ENST00000415298 ARHGDIBP52566 201 aa20.5■□□□□ 0.87
AP1S3-205ENST00000415298 BFSP1Q12934 665 aa20.5■□□□□ 0.87
AP1S3-205ENST00000415298 CCNG2Q16589 344 aa20.5■□□□□ 0.87
AP1S3-205ENST00000415298 ERAP2Q6P179 960 aa20.5■□□□□ 0.87
AP1S3-205ENST00000415298 SCLYQ96I15 445 aa20.5■□□□□ 0.87
AP1S3-205ENST00000415298 TOPORSQ9NS56 1045 aaPredicted RBP20.5■□□□□ 0.87
AP1S3-205ENST00000415298 SEPT11Q9NVA2 429 aaKnown RBP20.5■□□□□ 0.87
AP1S3-205ENST00000415298 ENOPH1Q9UHY7 261 aa20.5■□□□□ 0.87
AP1S3-205ENST00000415298 ZNF175Q9Y473 711 aa20.5■□□□□ 0.87
AP1S3-205ENST00000415298 TET1Q8NFU7 2136 aa20.49■□□□□ 0.87
AP1S3-205ENST00000415298 OGTO15294 1046 aa20.49■□□□□ 0.87
AP1S3-205ENST00000415298 ATG13O75143 517 aa20.49■□□□□ 0.87
AP1S3-205ENST00000415298 MAN1A1P33908 653 aa20.49■□□□□ 0.87
AP1S3-205ENST00000415298 CCL23P55773 120 aa20.49■□□□□ 0.87
AP1S3-205ENST00000415298 PON2Q15165 354 aa20.49■□□□□ 0.87
AP1S3-205ENST00000415298 NECAB2Q7Z6G3 386 aa20.49■□□□□ 0.87
AP1S3-205ENST00000415298 TMEM130Q8N3G9 435 aa20.49■□□□□ 0.87
AP1S3-205ENST00000415298 FAM149B1Q96BN6 582 aa20.49■□□□□ 0.87
AP1S3-205ENST00000415298 BTBD6Q96KE9 485 aa20.49■□□□□ 0.87
AP1S3-205ENST00000415298 A0A0X1KG70 313 aa20.49■□□□□ 0.87
AP1S3-205ENST00000415298 LINC01387J3KSC0 135 aa20.49■□□□□ 0.87
AP1S3-205ENST00000415298 LRRN2O75325 713 aa20.49■□□□□ 0.87
AP1S3-205ENST00000415298 KATNA1O75449 491 aa20.49■□□□□ 0.87
AP1S3-205ENST00000415298 NTRK1P04629 796 aa20.49■□□□□ 0.87
AP1S3-205ENST00000415298 DLATP10515 647 aaKnown RBP20.49■□□□□ 0.87
AP1S3-205ENST00000415298 ZNF26P17031 533 aaPredicted RBP20.49■□□□□ 0.87
AP1S3-205ENST00000415298 CYP3A5P20815 502 aa20.49■□□□□ 0.87
AP1S3-205ENST00000415298 PIK3R1P27986 724 aa20.49■□□□□ 0.87
AP1S3-205ENST00000415298 VAMP7P51809 220 aa20.49■□□□□ 0.87
AP1S3-205ENST00000415298 ARHGDIAP52565 204 aa20.49■□□□□ 0.87
AP1S3-205ENST00000415298 CYP24A1Q07973 514 aa20.49■□□□□ 0.87
AP1S3-205ENST00000415298 NOTUMQ6P988 496 aa20.49■□□□□ 0.87
AP1S3-205ENST00000415298 ZFYVE19Q96K21 471 aa20.49■□□□□ 0.87
AP1S3-205ENST00000415298 MFSD14AQ96MC6 490 aa20.49■□□□□ 0.87
AP1S3-205ENST00000415298 COPS7BQ9H9Q2 264 aaPredicted RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms