RNA–Protein interactions for RNA: ENST00000414802.5

CNOT4-204, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 1,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-204ENST00000414802 CDH17Q12864 832 aa13.18□□□□□ -0.3
CNOT4-204ENST00000414802 SEPT6Q14141 434 aa13.18□□□□□ -0.3
CNOT4-204ENST00000414802 POU6F1Q14863 301 aa13.18□□□□□ -0.3
CNOT4-204ENST00000414802 UGP2Q16851 508 aa13.18□□□□□ -0.3
CNOT4-204ENST00000414802 FNBP1LQ5T0N5 605 aa13.18□□□□□ -0.3
CNOT4-204ENST00000414802 CERCAMQ5T4B2 595 aa13.18□□□□□ -0.3
CNOT4-204ENST00000414802 LINC00523Q86TU6 105 aa13.18□□□□□ -0.3
CNOT4-204ENST00000414802 TTC7BQ86TV6 843 aa13.18□□□□□ -0.3
CNOT4-204ENST00000414802 TSPAN33Q86UF1 283 aa13.18□□□□□ -0.3
CNOT4-204ENST00000414802 FBXL6Q8N531 539 aa13.18□□□□□ -0.3
CNOT4-204ENST00000414802 BBOF1Q8ND07 529 aa13.18□□□□□ -0.3
CNOT4-204ENST00000414802 MCUQ8NE86 351 aa13.18□□□□□ -0.3
CNOT4-204ENST00000414802 ART4Q93070 314 aa13.18□□□□□ -0.3
CNOT4-204ENST00000414802 IER2Q9BTL4 223 aa13.18□□□□□ -0.3
CNOT4-204ENST00000414802 ADGRE3Q9BY15 652 aa13.18□□□□□ -0.3
CNOT4-204ENST00000414802 C11orf16Q9NQ32 467 aa13.18□□□□□ -0.3
CNOT4-204ENST00000414802 B4GALT6Q9UBX8 382 aa13.18□□□□□ -0.3
CNOT4-204ENST00000414802 EBF1Q9UH73 591 aa13.18□□□□□ -0.3
CNOT4-204ENST00000414802 PHTF1Q9UMS5 762 aa13.18□□□□□ -0.3
CNOT4-204ENST00000414802 CYP8B1Q9UNU6 501 aa13.18□□□□□ -0.3
CNOT4-204ENST00000414802 ARIH1Q9Y4X5 557 aaPredicted RBP13.18□□□□□ -0.3
CNOT4-204ENST00000414802 PIKFYVEQ9Y2I7 2098 aa13.17□□□□□ -0.3
CNOT4-204ENST00000414802 CCDC78A2IDD5 438 aa13.17□□□□□ -0.3
CNOT4-204ENST00000414802 PRR23AA6NEV1 266 aa13.17□□□□□ -0.3
CNOT4-204ENST00000414802 CAPN8A6NHC0 703 aa13.17□□□□□ -0.3
CNOT4-204ENST00000414802 ANKRD66B4E2M5 251 aa13.17□□□□□ -0.3
CNOT4-204ENST00000414802 ECHS1P30084 290 aa13.17□□□□□ -0.3
CNOT4-204ENST00000414802 HNF1BP35680 557 aa13.17□□□□□ -0.3
CNOT4-204ENST00000414802 MMP12P39900 470 aa13.17□□□□□ -0.3
CNOT4-204ENST00000414802 DRG2P55039 364 aaKnown RBP13.17□□□□□ -0.3
CNOT4-204ENST00000414802 FAM193AP78312 1265 aa13.17□□□□□ -0.3
CNOT4-204ENST00000414802 CDK16Q00536 496 aa13.17□□□□□ -0.3
CNOT4-204ENST00000414802 ELF2Q15723 593 aa13.17□□□□□ -0.3
CNOT4-204ENST00000414802 MSS51Q4VC12 460 aa13.17□□□□□ -0.3
CNOT4-204ENST00000414802 CCDC38Q502W7 563 aa13.17□□□□□ -0.3
CNOT4-204ENST00000414802 LRRC8BQ6P9F7 803 aa13.17□□□□□ -0.3
CNOT4-204ENST00000414802 USP45Q70EL2 814 aa13.17□□□□□ -0.3
CNOT4-204ENST00000414802 IFT20Q8IY31 132 aa13.17□□□□□ -0.3
CNOT4-204ENST00000414802 AGGF1Q8N302 714 aaeCLIP13.17□□□□□ -0.3
CNOT4-204ENST00000414802 MPP5Q8N3R9 675 aa13.17□□□□□ -0.3
CNOT4-204ENST00000414802 RLN3Q8WXF3 142 aa13.17□□□□□ -0.3
CNOT4-204ENST00000414802 HDAC8Q9BY41 377 aa13.17□□□□□ -0.3
CNOT4-204ENST00000414802 ZDHHC18Q9NUE0 388 aa13.17□□□□□ -0.3
CNOT4-204ENST00000414802 SYBUQ9NX95 663 aa13.17□□□□□ -0.3
CNOT4-204ENST00000414802 NFU1Q9UMS0 254 aa13.17□□□□□ -0.3
CNOT4-204ENST00000414802 TNRC6BQ9UPQ9 1833 aaKnown RBP13.16□□□□□ -0.3
CNOT4-204ENST00000414802 GOLGA8CPA6NN73 597 aa13.16□□□□□ -0.3
CNOT4-204ENST00000414802 AURKAO14965 403 aa13.16□□□□□ -0.3
CNOT4-204ENST00000414802 BUD23O43709 281 aaKnown RBP13.16□□□□□ -0.3
CNOT4-204ENST00000414802 EPOP01588 193 aa13.16□□□□□ -0.3
CNOT4-204ENST00000414802 MYBL2P10244 700 aa13.16□□□□□ -0.3
CNOT4-204ENST00000414802 LHCGRP22888 699 aa13.16□□□□□ -0.3
CNOT4-204ENST00000414802 TPMTP51580 245 aa13.16□□□□□ -0.3
CNOT4-204ENST00000414802 TAS2R38P59533 333 aa13.16□□□□□ -0.3
CNOT4-204ENST00000414802 RPL26P61254 145 aaKnown RBP13.16□□□□□ -0.3
CNOT4-204ENST00000414802 SARNPP82979 210 aaKnown RBP13.16□□□□□ -0.3
CNOT4-204ENST00000414802 DHX9Q08211 1270 aaKnown RBP13.16□□□□□ -0.3
CNOT4-204ENST00000414802 BBS9Q3SYG4 887 aa13.16□□□□□ -0.3
CNOT4-204ENST00000414802 HP1BP3Q5SSJ5 553 aaPredicted RBP13.16□□□□□ -0.3
CNOT4-204ENST00000414802 MICALCLQ6ZW33 695 aa13.16□□□□□ -0.3
CNOT4-204ENST00000414802 LYSMD3Q7Z3D4 306 aa13.16□□□□□ -0.3
CNOT4-204ENST00000414802 RASSF3Q86WH2 238 aa13.16□□□□□ -0.3
CNOT4-204ENST00000414802 CCDC25Q86WR0 208 aa13.16□□□□□ -0.3
CNOT4-204ENST00000414802 FRMD1Q8N878 549 aa13.16□□□□□ -0.3
CNOT4-204ENST00000414802 DTWD2Q8NBA8 298 aa13.16□□□□□ -0.3
CNOT4-204ENST00000414802 MCCC1Q96RQ3 725 aaPredicted RBP13.16□□□□□ -0.3
CNOT4-204ENST00000414802 WRAP53Q9BUR4 548 aaKnown RBP13.16□□□□□ -0.3
CNOT4-204ENST00000414802 ARNT2Q9HBZ2 717 aa13.16□□□□□ -0.3
CNOT4-204ENST00000414802 XAB2Q9HCS7 855 aaKnown RBP13.16□□□□□ -0.3
CNOT4-204ENST00000414802 PRMT8Q9NR22 394 aaPredicted RBP13.16□□□□□ -0.3
CNOT4-204ENST00000414802 RPL26L1Q9UNX3 145 aaKnown RBP13.16□□□□□ -0.3
CNOT4-204ENST00000414802 INVSQ9Y283 1065 aa13.16□□□□□ -0.3
CNOT4-204ENST00000414802 ZNF711Q9Y462 761 aa13.16□□□□□ -0.3
CNOT4-204ENST00000414802 BPTFQ12830 3046 aa13.15□□□□□ -0.3
CNOT4-204ENST00000414802 A0A1W2PQ67 120 aa13.15□□□□□ -0.3
CNOT4-204ENST00000414802 LAMTOR5O43504 91 aa13.15□□□□□ -0.3
CNOT4-204ENST00000414802 VIPR1P32241 457 aa13.15□□□□□ -0.3
CNOT4-204ENST00000414802 PI4KAP42356 2102 aa13.15□□□□□ -0.3
CNOT4-204ENST00000414802 MAGEA3P43357 314 aa13.15□□□□□ -0.3
CNOT4-204ENST00000414802 ADPRHP54922 357 aa13.15□□□□□ -0.3
CNOT4-204ENST00000414802 VSNL1P62760 191 aa13.15□□□□□ -0.3
CNOT4-204ENST00000414802 POLR2LP62875 67 aaKnown RBP13.15□□□□□ -0.3
CNOT4-204ENST00000414802 ZBTB16Q05516 673 aa13.15□□□□□ -0.3
CNOT4-204ENST00000414802 RALGDSQ12967 914 aa13.15□□□□□ -0.3
CNOT4-204ENST00000414802 FASTKD3Q14CZ7 662 aaKnown RBP13.15□□□□□ -0.3
CNOT4-204ENST00000414802 HIF1AQ16665 826 aa13.15□□□□□ -0.3
CNOT4-204ENST00000414802 ERAP2Q6P179 960 aa13.15□□□□□ -0.3
CNOT4-204ENST00000414802 CRTC1Q6UUV9 634 aa13.15□□□□□ -0.3
CNOT4-204ENST00000414802 DPPA4Q7L190 304 aa13.15□□□□□ -0.3
CNOT4-204ENST00000414802 GLT6D1Q7Z4J2 308 aa13.15□□□□□ -0.3
CNOT4-204ENST00000414802 ZCCHC9Q8N567 271 aaKnown RBP13.15□□□□□ -0.3
CNOT4-204ENST00000414802 FAM160A2Q8N612 972 aaPredicted RBP13.15□□□□□ -0.3
CNOT4-204ENST00000414802 OR14C36Q8NHC7 312 aa13.15□□□□□ -0.3
CNOT4-204ENST00000414802 HCAR2Q8TDS4 363 aa13.15□□□□□ -0.3
CNOT4-204ENST00000414802 SPOCK2Q92563 424 aa13.15□□□□□ -0.3
CNOT4-204ENST00000414802 WDR83Q9BRX9 315 aaKnown RBP13.15□□□□□ -0.3
CNOT4-204ENST00000414802 TRIM56Q9BRZ2 755 aaKnown RBP13.15□□□□□ -0.3
CNOT4-204ENST00000414802 USP36Q9P275 1121 aaKnown RBP13.15□□□□□ -0.3
CNOT4-204ENST00000414802 SCML1Q9UN30 329 aa13.15□□□□□ -0.3
CNOT4-204ENST00000414802 KCTD3Q9Y597 815 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms