RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 LRMPQ12912 555 aa15.85■□□□□ 0.13
CPNE1-208ENST00000414711 NME3Q13232 169 aa15.85■□□□□ 0.13
CPNE1-208ENST00000414711 MTM1Q13496 603 aa15.85■□□□□ 0.13
CPNE1-208ENST00000414711 SQSTM1Q13501 440 aa15.85■□□□□ 0.13
CPNE1-208ENST00000414711 SEMA5AQ13591 1074 aa15.85■□□□□ 0.13
CPNE1-208ENST00000414711 TAF5Q15542 800 aa15.85■□□□□ 0.13
CPNE1-208ENST00000414711 CBWD6Q4V339 395 aa15.85■□□□□ 0.13
CPNE1-208ENST00000414711 CBWD3Q5JTY5 395 aa15.85■□□□□ 0.13
CPNE1-208ENST00000414711 CBWD5Q5RIA9 395 aa15.85■□□□□ 0.13
CPNE1-208ENST00000414711 Q8NA96 180 aa15.85■□□□□ 0.13
CPNE1-208ENST00000414711 VOPP1Q96AW1 172 aa15.85■□□□□ 0.13
CPNE1-208ENST00000414711 ISG20Q96AZ6 181 aaKnown RBP15.85■□□□□ 0.13
CPNE1-208ENST00000414711 MED15Q96RN5 788 aa15.85■□□□□ 0.13
CPNE1-208ENST00000414711 SLC25A23Q9BV35 468 aa15.85■□□□□ 0.13
CPNE1-208ENST00000414711 TWSG1Q9GZX9 223 aa15.85■□□□□ 0.13
CPNE1-208ENST00000414711 APMAPQ9HDC9 416 aa15.85■□□□□ 0.13
CPNE1-208ENST00000414711 SPATS2LQ9NUQ6 558 aaKnown RBP15.85■□□□□ 0.13
CPNE1-208ENST00000414711 FAM13BQ9NYF5 915 aa15.85■□□□□ 0.13
CPNE1-208ENST00000414711 RRN3Q9NYV6 651 aa15.85■□□□□ 0.13
CPNE1-208ENST00000414711 CFAP45Q9UL16 551 aa15.85■□□□□ 0.13
CPNE1-208ENST00000414711 PCDHB4Q9Y5E5 795 aa15.85■□□□□ 0.13
CPNE1-208ENST00000414711 RNF225M0QZC1 329 aaPredicted RBP15.84■□□□□ 0.13
CPNE1-208ENST00000414711 CACNB4O00305 520 aaPredicted RBP15.84■□□□□ 0.13
CPNE1-208ENST00000414711 ECEL1O95672 775 aa15.84■□□□□ 0.13
CPNE1-208ENST00000414711 BMP6P22004 513 aa15.84■□□□□ 0.13
CPNE1-208ENST00000414711 JMJD6Q6NYC1 403 aaPredicted RBP15.84■□□□□ 0.13
CPNE1-208ENST00000414711 TMEM71Q6P5X7 295 aa15.84■□□□□ 0.13
CPNE1-208ENST00000414711 ZNF783Q6ZMS7 281 aa15.84■□□□□ 0.13
CPNE1-208ENST00000414711 ZNF683Q8IZ20 524 aa15.84■□□□□ 0.13
CPNE1-208ENST00000414711 DEFB106AQ8N104 65 aa15.84■□□□□ 0.13
CPNE1-208ENST00000414711 LINC00301Q8NCQ3 95 aa15.84■□□□□ 0.13
CPNE1-208ENST00000414711 OR2AP1Q8NGE2 309 aa15.84■□□□□ 0.13
CPNE1-208ENST00000414711 SLC4A5Q9BY07 1137 aa15.84■□□□□ 0.13
CPNE1-208ENST00000414711 SLAMF7Q9NQ25 335 aa15.84■□□□□ 0.13
CPNE1-208ENST00000414711 FBXO8Q9NRD0 319 aa15.84■□□□□ 0.13
CPNE1-208ENST00000414711 MPP6Q9NZW5 540 aa15.84■□□□□ 0.13
CPNE1-208ENST00000414711 COQ4Q9Y3A0 265 aa15.84■□□□□ 0.13
CPNE1-208ENST00000414711 PCDHGA9Q9Y5G4 932 aaKnown RBP15.84■□□□□ 0.13
CPNE1-208ENST00000414711 CROCCQ5TZA2 2017 aa15.84■□□□□ 0.13
CPNE1-208ENST00000414711 ILVBLA1L0T0 632 aa15.83■□□□□ 0.12
CPNE1-208ENST00000414711 A6NCN8 305 aa15.83■□□□□ 0.12
CPNE1-208ENST00000414711 LRCH4O75427 683 aa15.83■□□□□ 0.12
CPNE1-208ENST00000414711 KATNA1O75449 491 aa15.83■□□□□ 0.12
CPNE1-208ENST00000414711 CD160O95971 181 aa15.83■□□□□ 0.12
CPNE1-208ENST00000414711 GSRP00390 522 aa15.83■□□□□ 0.12
CPNE1-208ENST00000414711 FGF1P05230 155 aa15.83■□□□□ 0.12
CPNE1-208ENST00000414711 KRT85P78386 507 aa15.83■□□□□ 0.12
CPNE1-208ENST00000414711 ADAM9Q13443 819 aa15.83■□□□□ 0.12
CPNE1-208ENST00000414711 POLD3Q15054 466 aaPredicted RBP15.83■□□□□ 0.12
CPNE1-208ENST00000414711 FOXD4L6Q3SYB3 417 aaPredicted RBP15.83■□□□□ 0.12
CPNE1-208ENST00000414711 TMEM52BQ4KMG9 183 aa15.83■□□□□ 0.12
CPNE1-208ENST00000414711 SNAP47Q5SQN1 464 aa15.83■□□□□ 0.12
CPNE1-208ENST00000414711 FOXD4L3Q6VB84 417 aaPredicted RBP15.83■□□□□ 0.12
CPNE1-208ENST00000414711 GDPD4Q6W3E5 623 aa15.83■□□□□ 0.12
CPNE1-208ENST00000414711 FUBP1Q96AE4 644 aaKnown RBP15.83■□□□□ 0.12
CPNE1-208ENST00000414711 SLC2A13Q96QE2 648 aa15.83■□□□□ 0.12
CPNE1-208ENST00000414711 MFRPQ9BY79 579 aa15.83■□□□□ 0.12
CPNE1-208ENST00000414711 RUBCNLQ9H714 662 aa15.83■□□□□ 0.12
CPNE1-208ENST00000414711 PDP2Q9P2J9 529 aa15.83■□□□□ 0.12
CPNE1-208ENST00000414711 ITGB1BP2Q9UKP3 347 aa15.83■□□□□ 0.12
CPNE1-208ENST00000414711 SNX10Q9Y5X0 201 aa15.83■□□□□ 0.12
CPNE1-208ENST00000414711 ANKRD36A6QL64 1941 aa15.83■□□□□ 0.12
CPNE1-208ENST00000414711 DNHD1Q96M86 4753 aa15.82■□□□□ 0.12
CPNE1-208ENST00000414711 A0A1B0GTL3 188 aa15.82■□□□□ 0.12
CPNE1-208ENST00000414711 A8MU76 341 aa15.82■□□□□ 0.12
CPNE1-208ENST00000414711 TNFRSF10CO14798 259 aa15.82■□□□□ 0.12
CPNE1-208ENST00000414711 DIAPH2O60879 1101 aa15.82■□□□□ 0.12
CPNE1-208ENST00000414711 PPP6R2O75170 966 aa15.82■□□□□ 0.12
CPNE1-208ENST00000414711 RHOBTB3O94955 611 aa15.82■□□□□ 0.12
CPNE1-208ENST00000414711 CBX6O95503 412 aa15.82■□□□□ 0.12
CPNE1-208ENST00000414711 POP4O95707 220 aaKnown RBP15.82■□□□□ 0.12
CPNE1-208ENST00000414711 CCNB1P14635 433 aa15.82■□□□□ 0.12
CPNE1-208ENST00000414711 KELP23276 732 aa15.82■□□□□ 0.12
CPNE1-208ENST00000414711 SNRPD1P62314 119 aaKnown RBP15.82■□□□□ 0.12
CPNE1-208ENST00000414711 DNM1Q05193 864 aaKnown RBP15.82■□□□□ 0.12
CPNE1-208ENST00000414711 TSR1Q2NL82 804 aaKnown RBP15.82■□□□□ 0.12
CPNE1-208ENST00000414711 MYLK3Q32MK0 819 aa15.82■□□□□ 0.12
CPNE1-208ENST00000414711 DCAF17Q5H9S7 520 aaPredicted RBP15.82■□□□□ 0.12
CPNE1-208ENST00000414711 ANKRD40Q6AI12 368 aa15.82■□□□□ 0.12
CPNE1-208ENST00000414711 PLA2G15Q8NCC3 412 aa15.82■□□□□ 0.12
CPNE1-208ENST00000414711 PATE1Q8WXA2 126 aa15.82■□□□□ 0.12
CPNE1-208ENST00000414711 ULBP3Q9BZM4 244 aa15.82■□□□□ 0.12
CPNE1-208ENST00000414711 MLXIPLQ9NP71 852 aa15.82■□□□□ 0.12
CPNE1-208ENST00000414711 TAAR2Q9P1P5 351 aa15.82■□□□□ 0.12
CPNE1-208ENST00000414711 MOSPD1Q9UJG1 213 aa15.82■□□□□ 0.12
CPNE1-208ENST00000414711 PIPSLA2A3N6 862 aa15.81■□□□□ 0.12
CPNE1-208ENST00000414711 DRGXA6NNA5 263 aa15.81■□□□□ 0.12
CPNE1-208ENST00000414711 POLR1CO15160 346 aaPredicted RBP15.81■□□□□ 0.12
CPNE1-208ENST00000414711 PPM1DO15297 605 aa15.81■□□□□ 0.12
CPNE1-208ENST00000414711 KRT86O43790 486 aa15.81■□□□□ 0.12
CPNE1-208ENST00000414711 CUTAO60888 179 aa15.81■□□□□ 0.12
CPNE1-208ENST00000414711 PPM1FP49593 454 aaPredicted RBP15.81■□□□□ 0.12
CPNE1-208ENST00000414711 GPLD1P80108 840 aa15.81■□□□□ 0.12
CPNE1-208ENST00000414711 GNA12Q03113 381 aa15.81■□□□□ 0.12
CPNE1-208ENST00000414711 ELP6Q0PNE2 266 aa15.81■□□□□ 0.12
CPNE1-208ENST00000414711 ILF3Q12906 894 aaKnown RBP eCLIP15.81■□□□□ 0.123e-7■■□□□ 12.3
CPNE1-208ENST00000414711 EFHC1Q5JVL4 640 aa15.81■□□□□ 0.12
CPNE1-208ENST00000414711 ATXN7L2Q5T6C5 722 aaPredicted RBP15.81■□□□□ 0.12
CPNE1-208ENST00000414711 TCERG1LQ5VWI1 586 aa15.81■□□□□ 0.12
CPNE1-208ENST00000414711 PAPD7Q5XG87 772 aaKnown RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms