RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 PIRTP0C851 137 aa15.62■□□□□ 0.09
SHMT2-202ENST00000414700 SSTR1P30872 391 aa15.62■□□□□ 0.09
SHMT2-202ENST00000414700 SEC13P55735 322 aa15.62■□□□□ 0.09
SHMT2-202ENST00000414700 GPX6P59796 221 aa15.62■□□□□ 0.09
SHMT2-202ENST00000414700 ST8SIA6P61647 398 aa15.62■□□□□ 0.09
SHMT2-202ENST00000414700 AP1S1P61966 158 aa15.62■□□□□ 0.09
SHMT2-202ENST00000414700 MSLNQ13421 630 aaPredicted RBP15.62■□□□□ 0.09
SHMT2-202ENST00000414700 SLC29A2Q14542 456 aa15.62■□□□□ 0.09
SHMT2-202ENST00000414700 POU6F1Q14863 301 aa15.62■□□□□ 0.09
SHMT2-202ENST00000414700 MYLK3Q32MK0 819 aa15.62■□□□□ 0.09
SHMT2-202ENST00000414700 PUS10Q3MIT2 529 aaKnown RBP15.62■□□□□ 0.09
SHMT2-202ENST00000414700 CASC4Q6P4E1 433 aa15.62■□□□□ 0.09
SHMT2-202ENST00000414700 TBC1D1Q86TI0 1168 aaPredicted RBP15.62■□□□□ 0.09
SHMT2-202ENST00000414700 LINC00523Q86TU6 105 aa15.62■□□□□ 0.09
SHMT2-202ENST00000414700 PYROXD1Q8WU10 500 aa15.62■□□□□ 0.09
SHMT2-202ENST00000414700 DNASE1L2Q92874 299 aa15.62■□□□□ 0.09
SHMT2-202ENST00000414700 IFT43Q96FT9 208 aa15.62■□□□□ 0.09
SHMT2-202ENST00000414700 FEM1CQ96JP0 617 aa15.62■□□□□ 0.09
SHMT2-202ENST00000414700 ZNF778Q96MU6 729 aa15.62■□□□□ 0.09
SHMT2-202ENST00000414700 FRMD8Q9BZ67 464 aaPredicted RBP15.62■□□□□ 0.09
SHMT2-202ENST00000414700 TMEM245Q9H330 911 aa15.62■□□□□ 0.09
SHMT2-202ENST00000414700 PABPC3Q9H361 631 aaKnown RBP15.62■□□□□ 0.09
SHMT2-202ENST00000414700 ZDHHC6Q9H6R6 413 aa15.62■□□□□ 0.09
SHMT2-202ENST00000414700 PCDHB9Q9Y5E1 797 aa15.62■□□□□ 0.09
SHMT2-202ENST00000414700 CCDC78A2IDD5 438 aa15.61■□□□□ 0.09
SHMT2-202ENST00000414700 TRAFD1O14545 582 aaPredicted RBP15.61■□□□□ 0.09
SHMT2-202ENST00000414700 TIMM44O43615 452 aa15.61■□□□□ 0.09
SHMT2-202ENST00000414700 PIAS1O75925 651 aa15.61■□□□□ 0.09
SHMT2-202ENST00000414700 TTC4O95801 387 aa15.61■□□□□ 0.09
SHMT2-202ENST00000414700 GSRP00390 522 aa15.61■□□□□ 0.09
SHMT2-202ENST00000414700 EGFP01133 1207 aa15.61■□□□□ 0.09
SHMT2-202ENST00000414700 CTSLP07711 333 aa15.61■□□□□ 0.09
SHMT2-202ENST00000414700 SRFP11831 508 aa15.61■□□□□ 0.09
SHMT2-202ENST00000414700 CES1P23141 567 aa15.61■□□□□ 0.09
SHMT2-202ENST00000414700 CCND1P24385 295 aa15.61■□□□□ 0.09
SHMT2-202ENST00000414700 PRKCHP24723 683 aa15.61■□□□□ 0.09
SHMT2-202ENST00000414700 CSNK1DP48730 415 aa15.61■□□□□ 0.09
SHMT2-202ENST00000414700 RBBP5Q15291 538 aaKnown RBP15.61■□□□□ 0.09
SHMT2-202ENST00000414700 CES3Q6UWW8 571 aa15.61■□□□□ 0.09
SHMT2-202ENST00000414700 SERPINA13PQ6UXR4 307 aa15.61■□□□□ 0.09
SHMT2-202ENST00000414700 RALGPS2Q86X27 583 aaPredicted RBP15.61■□□□□ 0.09
SHMT2-202ENST00000414700 ZSWIM9Q86XI8 627 aa15.61■□□□□ 0.09
SHMT2-202ENST00000414700 ADHFE1Q8IWW8 467 aa15.61■□□□□ 0.09
SHMT2-202ENST00000414700 PHACTR1Q9C0D0 580 aa15.61■□□□□ 0.09
SHMT2-202ENST00000414700 ARNT2Q9HBZ2 717 aa15.61■□□□□ 0.09
SHMT2-202ENST00000414700 SAMD15Q9P1V8 674 aa15.61■□□□□ 0.09
SHMT2-202ENST00000414700 L3MBTL1Q9Y468 752 aa15.61■□□□□ 0.09
SHMT2-202ENST00000414700 A0A0U1RQS6 177 aa15.61■□□□□ 0.09
SHMT2-202ENST00000414700 SDR42E2A6NKP2 422 aa15.61■□□□□ 0.09
SHMT2-202ENST00000414700 FZD6O60353 706 aa15.61■□□□□ 0.09
SHMT2-202ENST00000414700 SNUPNO95149 360 aaKnown RBP15.61■□□□□ 0.09
SHMT2-202ENST00000414700 NQO1P15559 274 aaKnown RBP15.61■□□□□ 0.09
SHMT2-202ENST00000414700 PEX19P40855 299 aa15.61■□□□□ 0.09
SHMT2-202ENST00000414700 WASP42768 502 aa15.61■□□□□ 0.09
SHMT2-202ENST00000414700 KIR2DL1P43626 348 aaPredicted RBP15.61■□□□□ 0.09
SHMT2-202ENST00000414700 VASPP50552 380 aaPredicted RBP15.61■□□□□ 0.09
SHMT2-202ENST00000414700 FSTL4Q6MZW2 842 aa15.61■□□□□ 0.09
SHMT2-202ENST00000414700 TRPM8Q7Z2W7 1104 aa15.61■□□□□ 0.09
SHMT2-202ENST00000414700 LPCAT1Q8NF37 534 aa15.61■□□□□ 0.09
SHMT2-202ENST00000414700 CHRAC1Q9NRG0 131 aa15.61■□□□□ 0.09
SHMT2-202ENST00000414700 THEGQ9P2T0 379 aa15.61■□□□□ 0.09
SHMT2-202ENST00000414700 THAP10Q9P2Z0 257 aaPredicted RBP15.61■□□□□ 0.09
SHMT2-202ENST00000414700 CKAP5Q14008 2032 aa15.6■□□□□ 0.09
SHMT2-202ENST00000414700 NDST3O95803 873 aa15.6■□□□□ 0.09
SHMT2-202ENST00000414700 SHBGP04278 402 aa15.6■□□□□ 0.09
SHMT2-202ENST00000414700 UGT2B4P06133 528 aa15.6■□□□□ 0.09
SHMT2-202ENST00000414700 TIE1P35590 1138 aa15.6■□□□□ 0.09
SHMT2-202ENST00000414700 BCL2L1Q07817 233 aa15.6■□□□□ 0.09
SHMT2-202ENST00000414700 CBLBQ13191 982 aa15.6■□□□□ 0.09
SHMT2-202ENST00000414700 BLMHQ13867 455 aa15.6■□□□□ 0.09
SHMT2-202ENST00000414700 SMAD1Q15797 465 aaKnown RBP15.6■□□□□ 0.09
SHMT2-202ENST00000414700 SLC14A2Q15849 920 aa15.6■□□□□ 0.09
SHMT2-202ENST00000414700 HNRNPA1L2Q32P51 320 aaKnown RBP15.6■□□□□ 0.09
SHMT2-202ENST00000414700 C2orf27AQ580R0 203 aa15.6■□□□□ 0.09
SHMT2-202ENST00000414700 TMEM196Q5HYL7 178 aa15.6■□□□□ 0.09
SHMT2-202ENST00000414700 ZNF513Q8N8E2 541 aaPredicted RBP15.6■□□□□ 0.09
SHMT2-202ENST00000414700 MDM1Q8TC05 714 aa15.6■□□□□ 0.09
SHMT2-202ENST00000414700 RMDN1Q96DB5 314 aa15.6■□□□□ 0.09
SHMT2-202ENST00000414700 CFAP36Q96G28 342 aa15.6■□□□□ 0.09
SHMT2-202ENST00000414700 EBNA1BP2Q99848 306 aaKnown RBP15.6■□□□□ 0.09
SHMT2-202ENST00000414700 BFARQ9NZS9 450 aa15.6■□□□□ 0.09
SHMT2-202ENST00000414700 ZC3H7BQ9UGR2 993 aaKnown RBP15.6■□□□□ 0.09
SHMT2-202ENST00000414700 STARD13Q9Y3M8 1113 aa15.6■□□□□ 0.09
SHMT2-202ENST00000414700 WASF2Q9Y6W5 498 aa15.6■□□□□ 0.09
SHMT2-202ENST00000414700 DIAPH2O60879 1101 aa15.6■□□□□ 0.09
SHMT2-202ENST00000414700 SIN3BO75182 1162 aa15.6■□□□□ 0.09
SHMT2-202ENST00000414700 LEFTY1O75610 366 aa15.6■□□□□ 0.09
SHMT2-202ENST00000414700 POP4O95707 220 aaKnown RBP15.6■□□□□ 0.09
SHMT2-202ENST00000414700 EPOP01588 193 aa15.6■□□□□ 0.09
SHMT2-202ENST00000414700 METAP1P53582 386 aa15.6■□□□□ 0.09
SHMT2-202ENST00000414700 POM121L1PQ3SYA9 428 aa15.6■□□□□ 0.09
SHMT2-202ENST00000414700 SLC44A4Q53GD3 710 aa15.6■□□□□ 0.09
SHMT2-202ENST00000414700 RALGPS1Q5JS13 557 aa15.6■□□□□ 0.09
SHMT2-202ENST00000414700 C9orf64Q5T6V5 341 aa15.6■□□□□ 0.09
SHMT2-202ENST00000414700 TRMT10CQ7L0Y3 403 aaKnown RBP15.6■□□□□ 0.09
SHMT2-202ENST00000414700 UNC5BQ8IZJ1 945 aa15.6■□□□□ 0.09
SHMT2-202ENST00000414700 UCMAQ8WVF2 138 aa15.6■□□□□ 0.09
SHMT2-202ENST00000414700 ATXN2LQ8WWM7 1075 aaKnown RBP15.6■□□□□ 0.09
SHMT2-202ENST00000414700 NSRP1Q9H0G5 558 aaKnown RBP15.6■□□□□ 0.09
SHMT2-202ENST00000414700 ATP13A3Q9H7F0 1226 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms