RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 VIPR1P32241 457 aa14.78□□□□□ -0.04
CHD1-202ENST00000414220 MMP12P39900 470 aa14.78□□□□□ -0.04
CHD1-202ENST00000414220 GRK6P43250 576 aa14.78□□□□□ -0.04
CHD1-202ENST00000414220 ATP5OP48047 213 aa14.78□□□□□ -0.04
CHD1-202ENST00000414220 RXRGP48443 463 aa14.78□□□□□ -0.04
CHD1-202ENST00000414220 PEX5P50542 639 aa14.78□□□□□ -0.04
CHD1-202ENST00000414220 CLDN2P57739 230 aa14.78□□□□□ -0.04
CHD1-202ENST00000414220 DSC2Q02487 901 aa14.78□□□□□ -0.04
CHD1-202ENST00000414220 TRAF2Q12933 501 aa14.78□□□□□ -0.04
CHD1-202ENST00000414220 ACOX1Q15067 660 aa14.78□□□□□ -0.04
CHD1-202ENST00000414220 GCNT7Q6ZNI0 430 aa14.78□□□□□ -0.04
CHD1-202ENST00000414220 RHBDD1Q8TEB9 315 aa14.78□□□□□ -0.04
CHD1-202ENST00000414220 HTR3CQ8WXA8 447 aa14.78□□□□□ -0.04
CHD1-202ENST00000414220 LRRC45Q96CN5 670 aa14.78□□□□□ -0.04
CHD1-202ENST00000414220 IFT43Q96FT9 208 aa14.78□□□□□ -0.04
CHD1-202ENST00000414220 SCRN2Q96FV2 425 aa14.78□□□□□ -0.04
CHD1-202ENST00000414220 AGAP3Q96P47 875 aa14.78□□□□□ -0.04
CHD1-202ENST00000414220 CDC6Q99741 560 aa14.78□□□□□ -0.04
CHD1-202ENST00000414220 SLC25A51Q9H1U9 297 aa14.78□□□□□ -0.04
CHD1-202ENST00000414220 PCDH9Q9HC56 1237 aa14.78□□□□□ -0.04
CHD1-202ENST00000414220 FNDC3AQ9Y2H6 1198 aaKnown RBP14.78□□□□□ -0.04
CHD1-202ENST00000414220 FRYLO94915 3013 aa14.77□□□□□ -0.04
CHD1-202ENST00000414220 H3BM21 787 aa14.77□□□□□ -0.05
CHD1-202ENST00000414220 PSMD11O00231 422 aa14.77□□□□□ -0.05
CHD1-202ENST00000414220 FTCDO95954 541 aa14.77□□□□□ -0.05
CHD1-202ENST00000414220 CD59P13987 128 aa14.77□□□□□ -0.05
CHD1-202ENST00000414220 HTR1BP28222 390 aa14.77□□□□□ -0.05
CHD1-202ENST00000414220 CD86P42081 329 aa14.77□□□□□ -0.05
CHD1-202ENST00000414220 AGERQ15109 404 aa14.77□□□□□ -0.05
CHD1-202ENST00000414220 PRKD1Q15139 912 aaPredicted RBP14.77□□□□□ -0.05
CHD1-202ENST00000414220 SEL1L2Q5TEA6 688 aa14.77□□□□□ -0.05
CHD1-202ENST00000414220 PSAPL1Q6NUJ1 521 aa14.77□□□□□ -0.05
CHD1-202ENST00000414220 LIPIQ6XZB0 460 aa14.77□□□□□ -0.05
CHD1-202ENST00000414220 PID1Q7Z2X4 250 aa14.77□□□□□ -0.05
CHD1-202ENST00000414220 ZSWIM9Q86XI8 627 aa14.77□□□□□ -0.05
CHD1-202ENST00000414220 CDKL3Q8IVW4 592 aaPredicted RBP14.77□□□□□ -0.05
CHD1-202ENST00000414220 NAXDQ8IW45 347 aa14.77□□□□□ -0.05
CHD1-202ENST00000414220 DEFB124Q8NES8 71 aa14.77□□□□□ -0.05
CHD1-202ENST00000414220 TRIM58Q8NG06 486 aa14.77□□□□□ -0.05
CHD1-202ENST00000414220 OR13H1Q8NG92 308 aa14.77□□□□□ -0.05
CHD1-202ENST00000414220 ARRDC2Q8TBH0 407 aa14.77□□□□□ -0.05
CHD1-202ENST00000414220 LRRN4Q8WUT4 740 aa14.77□□□□□ -0.05
CHD1-202ENST00000414220 CENPTQ96BT3 561 aa14.77□□□□□ -0.05
CHD1-202ENST00000414220 BMFQ96LC9 184 aa14.77□□□□□ -0.05
CHD1-202ENST00000414220 TEKT5Q96M29 485 aa14.77□□□□□ -0.05
CHD1-202ENST00000414220 TDRD1Q9BXT4 1180 aaKnown RBP14.77□□□□□ -0.05
CHD1-202ENST00000414220 IL21RQ9HBE5 538 aa14.77□□□□□ -0.05
CHD1-202ENST00000414220 LZTFL1Q9NQ48 299 aa14.77□□□□□ -0.05
CHD1-202ENST00000414220 KLHL8Q9P2G9 620 aaPredicted RBP14.77□□□□□ -0.05
CHD1-202ENST00000414220 SAE1Q9UBE0 346 aaPredicted RBP14.77□□□□□ -0.05
CHD1-202ENST00000414220 B4GALT6Q9UBX8 382 aa14.77□□□□□ -0.05
CHD1-202ENST00000414220 TRHDEQ9UKU6 1024 aa14.77□□□□□ -0.05
CHD1-202ENST00000414220 CA5BQ9Y2D0 317 aa14.77□□□□□ -0.05
CHD1-202ENST00000414220 PDE2AO00408 941 aaPredicted RBP14.76□□□□□ -0.05
CHD1-202ENST00000414220 SPINT1O43278 529 aa14.76□□□□□ -0.05
CHD1-202ENST00000414220 SH3BP5O60239 455 aa14.76□□□□□ -0.05
CHD1-202ENST00000414220 PRKCGP05129 697 aa14.76□□□□□ -0.05
CHD1-202ENST00000414220 PYGMP11217 842 aa14.76□□□□□ -0.05
CHD1-202ENST00000414220 PECAM1P16284 738 aaPredicted RBP14.76□□□□□ -0.05
CHD1-202ENST00000414220 ZNF30P17039 623 aa14.76□□□□□ -0.05
CHD1-202ENST00000414220 CCZ1BP86790 482 aa14.76□□□□□ -0.05
CHD1-202ENST00000414220 CCZ1P86791 482 aaPredicted RBP14.76□□□□□ -0.05
CHD1-202ENST00000414220 ZBTB17Q13105 803 aa14.76□□□□□ -0.05
CHD1-202ENST00000414220 PDE1CQ14123 709 aaPredicted RBP14.76□□□□□ -0.05
CHD1-202ENST00000414220 FGL2Q14314 439 aa14.76□□□□□ -0.05
CHD1-202ENST00000414220 NOMO1Q15155 1222 aa14.76□□□□□ -0.05
CHD1-202ENST00000414220 RPS6KA1Q15418 735 aa14.76□□□□□ -0.05
CHD1-202ENST00000414220 SLC14A2Q15849 920 aa14.76□□□□□ -0.05
CHD1-202ENST00000414220 PRAMEF14Q5SWL7 426 aa14.76□□□□□ -0.05
CHD1-202ENST00000414220 ITPRIPL1Q6GPH6 555 aa14.76□□□□□ -0.05
CHD1-202ENST00000414220 BTN2A2Q8WVV5 523 aa14.76□□□□□ -0.05
CHD1-202ENST00000414220 HES6Q96HZ4 224 aa14.76□□□□□ -0.05
CHD1-202ENST00000414220 SRPK1Q96SB4 655 aaKnown RBP14.76□□□□□ -0.05
CHD1-202ENST00000414220 KLF6Q99612 283 aaPredicted RBP14.76□□□□□ -0.05
CHD1-202ENST00000414220 GLOD4Q9HC38 313 aa14.76□□□□□ -0.05
CHD1-202ENST00000414220 CHKBQ9Y259 395 aa14.76□□□□□ -0.05
CHD1-202ENST00000414220 COQ6Q9Y2Z9 468 aa14.76□□□□□ -0.05
CHD1-202ENST00000414220 PPIL1Q9Y3C6 166 aa14.76□□□□□ -0.05
CHD1-202ENST00000414220 CAPN6Q9Y6Q1 641 aa14.76□□□□□ -0.05
CHD1-202ENST00000414220 A0A0J9YYE9 177 aa14.75□□□□□ -0.05
CHD1-202ENST00000414220 POM121BA6NF01 834 aa14.75□□□□□ -0.05
CHD1-202ENST00000414220 NEMP2A6NFY4 417 aa14.75□□□□□ -0.05
CHD1-202ENST00000414220 A8MX80 341 aa14.75□□□□□ -0.05
CHD1-202ENST00000414220 RAD51BO15315 384 aa14.75□□□□□ -0.05
CHD1-202ENST00000414220 ZSCAN12O43309 604 aa14.75□□□□□ -0.05
CHD1-202ENST00000414220 FZD6O60353 706 aa14.75□□□□□ -0.05
CHD1-202ENST00000414220 RECQL5O94762 991 aaPredicted RBP14.75□□□□□ -0.05
CHD1-202ENST00000414220 TRBC1P01850 177 aa14.75□□□□□ -0.05
CHD1-202ENST00000414220 ALPPL2P10696 532 aa14.75□□□□□ -0.05
CHD1-202ENST00000414220 CTPS1P17812 591 aa14.75□□□□□ -0.05
CHD1-202ENST00000414220 KELP23276 732 aa14.75□□□□□ -0.05
CHD1-202ENST00000414220 PTPN3P26045 913 aa14.75□□□□□ -0.05
CHD1-202ENST00000414220 BLKP51451 505 aa14.75□□□□□ -0.05
CHD1-202ENST00000414220 EIF3EP60228 445 aaKnown RBP14.75□□□□□ -0.05
CHD1-202ENST00000414220 HNRNPKP61978 463 aaKnown RBP eCLIP14.75□□□□□ -0.05
CHD1-202ENST00000414220 OTUD4Q01804 1114 aaKnown RBP14.75□□□□□ -0.05
CHD1-202ENST00000414220 SEMG2Q02383 582 aa14.75□□□□□ -0.05
CHD1-202ENST00000414220 NIPAL4Q0D2K0 466 aa14.75□□□□□ -0.05
CHD1-202ENST00000414220 MTM1Q13496 603 aa14.75□□□□□ -0.05
CHD1-202ENST00000414220 PRPSAP1Q14558 356 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms