RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 FFAR2O15552 330 aa14.88□□□□□ -0.03
LIMS4-201ENST00000413601 PSTPIP1O43586 416 aa14.88□□□□□ -0.03
LIMS4-201ENST00000413601 PGLSO95336 258 aa14.88□□□□□ -0.03
LIMS4-201ENST00000413601 IPO7O95373 1038 aaKnown RBP14.88□□□□□ -0.03
LIMS4-201ENST00000413601 CDKN2BP42772 138 aa14.88□□□□□ -0.03
LIMS4-201ENST00000413601 YPEL5P62699 121 aa14.88□□□□□ -0.03
LIMS4-201ENST00000413601 DYNLT1P63172 113 aa14.88□□□□□ -0.03
LIMS4-201ENST00000413601 PPIDQ08752 370 aaKnown RBP14.88□□□□□ -0.03
LIMS4-201ENST00000413601 EIF2B5Q13144 721 aaKnown RBP14.88□□□□□ -0.03
LIMS4-201ENST00000413601 DNAJC3Q13217 504 aa14.88□□□□□ -0.03
LIMS4-201ENST00000413601 IHHQ14623 411 aa14.88□□□□□ -0.03
LIMS4-201ENST00000413601 INPP5AQ14642 412 aa14.88□□□□□ -0.03
LIMS4-201ENST00000413601 AGERQ15109 404 aa14.88□□□□□ -0.03
LIMS4-201ENST00000413601 PTPRRQ15256 657 aa14.88□□□□□ -0.03
LIMS4-201ENST00000413601 LLGL1Q15334 1064 aa14.88□□□□□ -0.03
LIMS4-201ENST00000413601 FAM182AQ5T1J6 154 aa14.88□□□□□ -0.03
LIMS4-201ENST00000413601 ALG1LQ6GMV1 187 aa14.88□□□□□ -0.03
LIMS4-201ENST00000413601 C11orf63Q6NUN7 778 aa14.88□□□□□ -0.03
LIMS4-201ENST00000413601 PARGQ86W56 976 aa14.88□□□□□ -0.03
LIMS4-201ENST00000413601 ACRBPQ8NEB7 543 aa14.88□□□□□ -0.03
LIMS4-201ENST00000413601 TPCN2Q8NHX9 752 aa14.88□□□□□ -0.03
LIMS4-201ENST00000413601 SPOCK2Q92563 424 aa14.88□□□□□ -0.03
LIMS4-201ENST00000413601 BAG1Q99933 345 aaPredicted RBP14.88□□□□□ -0.03
LIMS4-201ENST00000413601 PHTF1Q9UMS5 762 aa14.88□□□□□ -0.03
LIMS4-201ENST00000413601 RAI2Q9Y5P3 530 aa14.88□□□□□ -0.03
LIMS4-201ENST00000413601 CFAP69A5D8W1 941 aa14.87□□□□□ -0.03
LIMS4-201ENST00000413601 KCNK1O00180 336 aa14.87□□□□□ -0.03
LIMS4-201ENST00000413601 TRIM38O00635 465 aa14.87□□□□□ -0.03
LIMS4-201ENST00000413601 SIGLEC6O43699 453 aa14.87□□□□□ -0.03
LIMS4-201ENST00000413601 RECQL5O94762 991 aaPredicted RBP14.87□□□□□ -0.03
LIMS4-201ENST00000413601 DKK1O94907 266 aa14.87□□□□□ -0.03
LIMS4-201ENST00000413601 JCHAINP01591 159 aa14.87□□□□□ -0.03
LIMS4-201ENST00000413601 CSF2P04141 144 aa14.87□□□□□ -0.03
LIMS4-201ENST00000413601 PCCBP05166 539 aa14.87□□□□□ -0.03
LIMS4-201ENST00000413601 HLA-DQB2P05538 268 aa14.87□□□□□ -0.03
LIMS4-201ENST00000413601 PDHA1P08559 390 aa14.87□□□□□ -0.03
LIMS4-201ENST00000413601 KRT10P13645 584 aa14.87□□□□□ -0.03
LIMS4-201ENST00000413601 NME1P15531 152 aaKnown RBP14.87□□□□□ -0.03
LIMS4-201ENST00000413601 ZFXP17010 805 aaPredicted RBP14.87□□□□□ -0.03
LIMS4-201ENST00000413601 GM2AP17900 193 aa14.87□□□□□ -0.03
LIMS4-201ENST00000413601 CDC25BP30305 580 aa14.87□□□□□ -0.03
LIMS4-201ENST00000413601 MARCKSL1P49006 195 aa14.87□□□□□ -0.03
LIMS4-201ENST00000413601 HNRNPKP61978 463 aaKnown RBP eCLIP14.87□□□□□ -0.03
LIMS4-201ENST00000413601 NIPAL4Q0D2K0 466 aa14.87□□□□□ -0.03
LIMS4-201ENST00000413601 AP1B1Q10567 949 aa14.87□□□□□ -0.03
LIMS4-201ENST00000413601 PTK2BQ14289 1009 aa14.87□□□□□ -0.03
LIMS4-201ENST00000413601 ACOX1Q15067 660 aa14.87□□□□□ -0.03
LIMS4-201ENST00000413601 ARMC12Q5T9G4 340 aa14.87□□□□□ -0.03
LIMS4-201ENST00000413601 KAZNQ674X7 775 aa14.87□□□□□ -0.03
LIMS4-201ENST00000413601 SPOCD1Q6ZMY3 1216 aa14.87□□□□□ -0.03
LIMS4-201ENST00000413601 B4GALNT4Q76KP1 1039 aa14.87□□□□□ -0.03
LIMS4-201ENST00000413601 DAAM2Q86T65 1068 aa14.87□□□□□ -0.03
LIMS4-201ENST00000413601 TMEM139Q8IV31 216 aa14.87□□□□□ -0.03
LIMS4-201ENST00000413601 PLA2G15Q8NCC3 412 aa14.87□□□□□ -0.03
LIMS4-201ENST00000413601 ARRDC2Q8TBH0 407 aa14.87□□□□□ -0.03
LIMS4-201ENST00000413601 LACRTQ9GZZ8 138 aa14.87□□□□□ -0.03
LIMS4-201ENST00000413601 IMPACTQ9P2X3 320 aa14.87□□□□□ -0.03
LIMS4-201ENST00000413601 SAE1Q9UBE0 346 aaPredicted RBP14.87□□□□□ -0.03
LIMS4-201ENST00000413601 AMACRQ9UHK6 382 aa14.87□□□□□ -0.03
LIMS4-201ENST00000413601 PNMA8BQ9ULN7 279 aaPredicted RBP14.87□□□□□ -0.03
LIMS4-201ENST00000413601 NPIPB15A6NHN6 443 aaPredicted RBP14.86□□□□□ -0.03
LIMS4-201ENST00000413601 TOR1BO14657 336 aa14.86□□□□□ -0.03
LIMS4-201ENST00000413601 GIMD1P0DJR0 217 aa14.86□□□□□ -0.03
LIMS4-201ENST00000413601 CYP2A6P11509 494 aaPredicted RBP14.86□□□□□ -0.03
LIMS4-201ENST00000413601 JUNDP17535 347 aa14.86□□□□□ -0.03
LIMS4-201ENST00000413601 CTPS1P17812 591 aa14.86□□□□□ -0.03
LIMS4-201ENST00000413601 CES1P23141 567 aa14.86□□□□□ -0.03
LIMS4-201ENST00000413601 VIPR1P32241 457 aa14.86□□□□□ -0.03
LIMS4-201ENST00000413601 NAP1L1P55209 391 aaKnown RBP14.86□□□□□ -0.03
LIMS4-201ENST00000413601 ZBTB17Q13105 803 aa14.86□□□□□ -0.03
LIMS4-201ENST00000413601 ZNF211Q13398 564 aaPredicted RBP14.86□□□□□ -0.03
LIMS4-201ENST00000413601 PDK1Q15118 436 aa14.86□□□□□ -0.03
LIMS4-201ENST00000413601 CNGA3Q16281 694 aa14.86□□□□□ -0.03
LIMS4-201ENST00000413601 TAZQ16635 292 aa14.86□□□□□ -0.03
LIMS4-201ENST00000413601 DENND2CQ68D51 928 aa14.86□□□□□ -0.03
LIMS4-201ENST00000413601 KATNAL2Q8IYT4 538 aa14.86□□□□□ -0.03
LIMS4-201ENST00000413601 OR4C6Q8NH72 309 aa14.86□□□□□ -0.03
LIMS4-201ENST00000413601 PIH1D2Q8WWB5 315 aa14.86□□□□□ -0.03
LIMS4-201ENST00000413601 KRT35Q92764 455 aa14.86□□□□□ -0.03
LIMS4-201ENST00000413601 SCRN2Q96FV2 425 aa14.86□□□□□ -0.03
LIMS4-201ENST00000413601 OLFM3Q96PB7 478 aa14.86□□□□□ -0.03
LIMS4-201ENST00000413601 SMIM14Q96QK8 99 aa14.86□□□□□ -0.03
LIMS4-201ENST00000413601 IL12RB2Q99665 862 aa14.86□□□□□ -0.03
LIMS4-201ENST00000413601 APOOQ9BUR5 198 aa14.86□□□□□ -0.03
LIMS4-201ENST00000413601 CEP41Q9BYV8 373 aa14.86□□□□□ -0.03
LIMS4-201ENST00000413601 TCEAL2Q9H3H9 227 aaPredicted RBP14.86□□□□□ -0.03
LIMS4-201ENST00000413601 HAUS2Q9NVX0 235 aa14.86□□□□□ -0.03
LIMS4-201ENST00000413601 NEUROG3Q9Y4Z2 214 aa14.86□□□□□ -0.03
LIMS4-201ENST00000413601 OR1A2Q9Y585 309 aa14.86□□□□□ -0.03
LIMS4-201ENST00000413601 SPEGQ15772 3267 aa14.85□□□□□ -0.03
LIMS4-201ENST00000413601 A0A0U1RQS6 177 aa14.85□□□□□ -0.03
LIMS4-201ENST00000413601 H3BM21 787 aa14.85□□□□□ -0.03
LIMS4-201ENST00000413601 FZD6O60353 706 aa14.85□□□□□ -0.03
LIMS4-201ENST00000413601 CST8O60676 142 aa14.85□□□□□ -0.03
LIMS4-201ENST00000413601 HEXIM1O94992 359 aaKnown RBP14.85□□□□□ -0.03
LIMS4-201ENST00000413601 ZRANB2O95218 330 aaKnown RBP eCLIP14.85□□□□□ -0.03
LIMS4-201ENST00000413601 ALPIP09923 528 aa14.85□□□□□ -0.03
LIMS4-201ENST00000413601 LHCGRP22888 699 aa14.85□□□□□ -0.03
LIMS4-201ENST00000413601 NFKBIAP25963 317 aa14.85□□□□□ -0.03
LIMS4-201ENST00000413601 VAV2P52735 878 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms