RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 TSPAN11A1L157 253 aa9.62□□□□□ -0.87
RFFL-203ENST00000413582 FGFR1OPO95684 399 aaKnown RBP9.62□□□□□ -0.87
RFFL-203ENST00000413582 CPNE6O95741 557 aa9.62□□□□□ -0.87
RFFL-203ENST00000413582 GNA14O95837 355 aa9.62□□□□□ -0.87
RFFL-203ENST00000413582 TNFP01375 233 aa9.62□□□□□ -0.87
RFFL-203ENST00000413582 PCCBP05166 539 aa9.62□□□□□ -0.87
RFFL-203ENST00000413582 PNMA6AP0CW24 399 aaPredicted RBP9.62□□□□□ -0.87
RFFL-203ENST00000413582 FGF3P11487 239 aaPredicted RBP9.62□□□□□ -0.87
RFFL-203ENST00000413582 RHOQP17081 205 aa9.62□□□□□ -0.87
RFFL-203ENST00000413582 SLC9A1P19634 815 aa9.62□□□□□ -0.87
RFFL-203ENST00000413582 CDH5P33151 784 aaPredicted RBP9.62□□□□□ -0.87
RFFL-203ENST00000413582 UGT1A3P35503 534 aa9.62□□□□□ -0.87
RFFL-203ENST00000413582 GABRB2P47870 512 aa9.62□□□□□ -0.87
RFFL-203ENST00000413582 NRG1Q02297 640 aaPredicted RBP9.62□□□□□ -0.87
RFFL-203ENST00000413582 PTK2Q05397 1052 aa9.62□□□□□ -0.87
RFFL-203ENST00000413582 ELP6Q0PNE2 266 aa9.62□□□□□ -0.87
RFFL-203ENST00000413582 MTM1Q13496 603 aa9.62□□□□□ -0.87
RFFL-203ENST00000413582 ARHGEF7Q14155 803 aa9.62□□□□□ -0.87
RFFL-203ENST00000413582 NR1D2Q14995 579 aa9.62□□□□□ -0.87
RFFL-203ENST00000413582 NCAPHQ15003 741 aa9.62□□□□□ -0.87
RFFL-203ENST00000413582 AGERQ15109 404 aa9.62□□□□□ -0.87
RFFL-203ENST00000413582 C4orf17Q53FE4 359 aa9.62□□□□□ -0.87
RFFL-203ENST00000413582 FAM102AQ5T9C2 384 aaPredicted RBP9.62□□□□□ -0.87
RFFL-203ENST00000413582 SPECC1LQ69YQ0 1117 aa9.62□□□□□ -0.87
RFFL-203ENST00000413582 ZNF438Q7Z4V0 828 aa9.62□□□□□ -0.87
RFFL-203ENST00000413582 TAF8Q7Z7C8 310 aa9.62□□□□□ -0.87
RFFL-203ENST00000413582 SLC47A2Q86VL8 602 aa9.62□□□□□ -0.87
RFFL-203ENST00000413582 XYLT1Q86Y38 959 aa9.62□□□□□ -0.87
RFFL-203ENST00000413582 RCBTB1Q8NDN9 531 aa9.62□□□□□ -0.87
RFFL-203ENST00000413582 FAM46DQ8NEK8 389 aa9.62□□□□□ -0.87
RFFL-203ENST00000413582 CCL4L1Q8NHW4 92 aa9.62□□□□□ -0.87
RFFL-203ENST00000413582 C9orf43Q8TAL5 461 aaPredicted RBP9.62□□□□□ -0.87
RFFL-203ENST00000413582 GPBAR1Q8TDU6 330 aa9.62□□□□□ -0.87
RFFL-203ENST00000413582 CCDC74BQ96LY2 380 aa9.62□□□□□ -0.87
RFFL-203ENST00000413582 CFAP57Q96MR6 1250 aa9.62□□□□□ -0.87
RFFL-203ENST00000413582 TTYH3Q9C0H2 523 aa9.62□□□□□ -0.87
RFFL-203ENST00000413582 CDH19Q9H159 772 aa9.62□□□□□ -0.87
RFFL-203ENST00000413582 MAGEH1Q9H213 219 aa9.62□□□□□ -0.87
RFFL-203ENST00000413582 SLC24A3Q9HC58 644 aa9.62□□□□□ -0.87
RFFL-203ENST00000413582 TMEM248Q9NWD8 314 aa9.62□□□□□ -0.87
RFFL-203ENST00000413582 AKAP7Q9P0M2 348 aaPredicted RBP9.62□□□□□ -0.87
RFFL-203ENST00000413582 DNAI1Q9UI46 699 aa9.62□□□□□ -0.87
RFFL-203ENST00000413582 PLAAQ9Y263 795 aa9.62□□□□□ -0.87
RFFL-203ENST00000413582 MFHAS1Q9Y4C4 1052 aa9.62□□□□□ -0.87
RFFL-203ENST00000413582 IGHV5-10-1A0A0J9YXX1 117 aa9.61□□□□□ -0.87
RFFL-203ENST00000413582 TMEM202A6NGA9 273 aa9.61□□□□□ -0.87
RFFL-203ENST00000413582 ZNF891A8MT65 544 aaPredicted RBP9.61□□□□□ -0.87
RFFL-203ENST00000413582 B4GAT1O43505 415 aa9.61□□□□□ -0.87
RFFL-203ENST00000413582 RAMP2O60895 175 aa9.61□□□□□ -0.87
RFFL-203ENST00000413582 PIGNO95427 931 aa9.61□□□□□ -0.87
RFFL-203ENST00000413582 IGSF6O95976 241 aa9.61□□□□□ -0.87
RFFL-203ENST00000413582 CLCN1P35523 988 aa9.61□□□□□ -0.87
RFFL-203ENST00000413582 KRT9P35527 623 aa9.61□□□□□ -0.87
RFFL-203ENST00000413582 MMP12P39900 470 aa9.61□□□□□ -0.87
RFFL-203ENST00000413582 SUOXP51687 545 aa9.61□□□□□ -0.87
RFFL-203ENST00000413582 MAZP56270 477 aaKnown RBP9.61□□□□□ -0.87
RFFL-203ENST00000413582 OR1D5P58170 312 aa9.61□□□□□ -0.87
RFFL-203ENST00000413582 RAD51Q06609 339 aa9.61□□□□□ -0.87
RFFL-203ENST00000413582 CLPPQ16740 277 aaPredicted RBP9.61□□□□□ -0.87
RFFL-203ENST00000413582 AMZ1Q400G9 498 aa9.61□□□□□ -0.87
RFFL-203ENST00000413582 RAB6CQ53S08 254 aa9.61□□□□□ -0.87
RFFL-203ENST00000413582 HIST2H2BCQ6DN03 193 aa9.61□□□□□ -0.87
RFFL-203ENST00000413582 RWDD4Q6NW29 188 aaKnown RBP9.61□□□□□ -0.87
RFFL-203ENST00000413582 PIM3Q86V86 326 aa9.61□□□□□ -0.87
RFFL-203ENST00000413582 C17orf82Q86X59 251 aaPredicted RBP9.61□□□□□ -0.87
RFFL-203ENST00000413582 IRF2BP1Q8IU81 584 aa9.61□□□□□ -0.87
RFFL-203ENST00000413582 HOMEZQ8IX15 550 aa9.61□□□□□ -0.87
RFFL-203ENST00000413582 AOPEPQ8N6M6 819 aa9.61□□□□□ -0.87
RFFL-203ENST00000413582 IL22RA1Q8N6P7 574 aa9.61□□□□□ -0.87
RFFL-203ENST00000413582 NETO2Q8NC67 525 aa9.61□□□□□ -0.87
RFFL-203ENST00000413582 PLA2G15Q8NCC3 412 aa9.61□□□□□ -0.87
RFFL-203ENST00000413582 TMEM35BQ8NCS4 154 aa9.61□□□□□ -0.87
RFFL-203ENST00000413582 OR56A4Q8NGH8 313 aa9.61□□□□□ -0.87
RFFL-203ENST00000413582 FUBP1Q96AE4 644 aaKnown RBP9.61□□□□□ -0.87
RFFL-203ENST00000413582 MIB2Q96AX9 1013 aa9.61□□□□□ -0.87
RFFL-203ENST00000413582 HMCESQ96FZ2 354 aa9.61□□□□□ -0.87
RFFL-203ENST00000413582 CATSPER2Q96P56 530 aa9.61□□□□□ -0.87
RFFL-203ENST00000413582 TAAR9Q96RI9 348 aa9.61□□□□□ -0.87
RFFL-203ENST00000413582 DDA1Q9BW61 102 aa9.61□□□□□ -0.87
RFFL-203ENST00000413582 RAB6CQ9H0N0 254 aa9.61□□□□□ -0.87
RFFL-203ENST00000413582 TMEM168Q9H0V1 697 aa9.61□□□□□ -0.87
RFFL-203ENST00000413582 DPEP2Q9H4A9 486 aa9.61□□□□□ -0.87
RFFL-203ENST00000413582 RETREG1Q9H6L5 497 aa9.61□□□□□ -0.87
RFFL-203ENST00000413582 PCDH12Q9NPG4 1184 aa9.61□□□□□ -0.87
RFFL-203ENST00000413582 MRPL40Q9NQ50 206 aaKnown RBP9.61□□□□□ -0.87
RFFL-203ENST00000413582 ZNF71Q9NQZ8 489 aaPredicted RBP9.61□□□□□ -0.87
RFFL-203ENST00000413582 LHX3Q9UBR4 397 aa9.61□□□□□ -0.87
RFFL-203ENST00000413582 OR12D3Q9UGF7 316 aa9.61□□□□□ -0.87
RFFL-203ENST00000413582 TMEM59LQ9UK28 342 aa9.61□□□□□ -0.87
RFFL-203ENST00000413582 HPCAL4Q9UM19 191 aa9.61□□□□□ -0.87
RFFL-203ENST00000413582 B3GALT1Q9Y5Z6 326 aa9.61□□□□□ -0.87
RFFL-203ENST00000413582 HIVEP3Q5T1R4 2406 aa9.61□□□□□ -0.87
RFFL-203ENST00000413582 CENPEQ02224 2701 aa9.6□□□□□ -0.87
RFFL-203ENST00000413582 FAM170AA1A519 330 aa9.6□□□□□ -0.87
RFFL-203ENST00000413582 ZSCAN5CA6NGD5 496 aaPredicted RBP9.6□□□□□ -0.87
RFFL-203ENST00000413582 FAM72CH0Y354 149 aa9.6□□□□□ -0.87
RFFL-203ENST00000413582 INSIG1O15503 277 aa9.6□□□□□ -0.87
RFFL-203ENST00000413582 BUB1O43683 1085 aa9.6□□□□□ -0.87
RFFL-203ENST00000413582 KDELR3O43731 214 aa9.6□□□□□ -0.87
RFFL-203ENST00000413582 DUX1O43812 170 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms