RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 MOCS1Q9NZB8 636 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 NR2E3Q9Y5X4 410 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 ILVBLA1L0T0 632 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 C9JVG2 144 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 ABCB7O75027 752 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 NDUFS3O75489 264 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 MYF6P23409 242 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 MTHFRP42898 656 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 CDH13P55290 713 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 FCHO2Q0JRZ9 810 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 C1QTNF12Q5T7M4 302 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 DEPDC1Q5TB30 811 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 ANKS6Q68DC2 871 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 CLEC6AQ6EIG7 209 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 GLYATQ6IB77 296 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 TRIM69Q86WT6 500 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 PTGR2Q8N8N7 351 aaPredicted RBP13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 ELOVL4Q9GZR5 314 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 VPS51Q9UID3 782 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 PRELID1Q9Y255 219 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 BTRCQ9Y297 605 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 IPPQ9Y573 584 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 FER1L4A9Z1Z3 1794 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 TRIM64CA6NLI5 447 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 ZNF99A8MXY4 864 aaPredicted RBP13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 M0QX08 132 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 AZIN1O14977 448 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 SERPINB7O75635 380 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 RSL1D1O76021 490 aaKnown RBP13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 RFX4Q33E94 735 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 GATAD2AQ86YP4 633 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 IFNLR1Q8IU57 520 aaPredicted RBP13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 SHKBP1Q8TBC3 707 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 FAM120BQ96EK7 910 aaKnown RBP13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 RNF38Q9H0F5 515 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 ASB7Q9H672 318 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 TRMT13Q9NUP7 481 aaKnown RBP13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 DTLQ9NZJ0 730 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 RAPGEFL1Q9UHV5 662 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 FBXO5Q9UKT4 447 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 EIF3LQ9Y262 564 aaKnown RBP13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 PCDHAC2Q9Y5I4 1007 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 ZNF142P52746 1687 aaPredicted RBP13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 STX7O15400 261 aaKnown RBP13.94□□□□□ -0.18
CLTCL1-201ENST00000412649 CCR10P46092 362 aa13.94□□□□□ -0.18
CLTCL1-201ENST00000412649 INTS11Q5TA45 600 aaKnown RBP13.94□□□□□ -0.18
CLTCL1-201ENST00000412649 LILRA2Q8N149 483 aa13.94□□□□□ -0.18
CLTCL1-201ENST00000412649 FBXO39Q8N4B4 442 aa13.94□□□□□ -0.18
CLTCL1-201ENST00000412649 AADATQ8N5Z0 425 aa13.94□□□□□ -0.18
CLTCL1-201ENST00000412649 C12orf29Q8N999 325 aa13.94□□□□□ -0.18
CLTCL1-201ENST00000412649 CITED4Q96RK1 184 aa13.94□□□□□ -0.18
CLTCL1-201ENST00000412649 ACO2Q99798 780 aaKnown RBP13.94□□□□□ -0.18
CLTCL1-201ENST00000412649 NPLQ9BXD5 320 aaPredicted RBP13.94□□□□□ -0.18
CLTCL1-201ENST00000412649 FAM49AQ9H0Q0 323 aaPredicted RBP13.94□□□□□ -0.18
CLTCL1-201ENST00000412649 VTA1Q9NP79 307 aa13.94□□□□□ -0.18
CLTCL1-201ENST00000412649 CCNB1IP1Q9NPC3 277 aa13.94□□□□□ -0.18
CLTCL1-201ENST00000412649 RGS18Q9NS28 235 aa13.94□□□□□ -0.18
CLTCL1-201ENST00000412649 GMPPBQ9Y5P6 360 aa13.94□□□□□ -0.18
CLTCL1-201ENST00000412649 TSC22D2O75157 780 aa13.94□□□□□ -0.18
CLTCL1-201ENST00000412649 AP2A1O95782 977 aa13.94□□□□□ -0.18
CLTCL1-201ENST00000412649 ADORA2AP29274 412 aa13.94□□□□□ -0.18
CLTCL1-201ENST00000412649 NR6A1Q15406 480 aa13.94□□□□□ -0.18
CLTCL1-201ENST00000412649 PFKFB4Q16877 469 aa13.94□□□□□ -0.18
CLTCL1-201ENST00000412649 CHPT1Q8WUD6 406 aa13.94□□□□□ -0.18
CLTCL1-201ENST00000412649 DCPSQ96C86 337 aaKnown RBP13.94□□□□□ -0.18
CLTCL1-201ENST00000412649 PABPC5Q96DU9 382 aaKnown RBP13.94□□□□□ -0.18
CLTCL1-201ENST00000412649 KCTD15Q96SI1 283 aaPredicted RBP13.94□□□□□ -0.18
CLTCL1-201ENST00000412649 COL20A1Q9P218 1284 aa13.94□□□□□ -0.18
CLTCL1-201ENST00000412649 CPSF3Q9UKF6 684 aaKnown RBP13.94□□□□□ -0.18
CLTCL1-201ENST00000412649 GJA3Q9Y6H8 435 aa13.94□□□□□ -0.18
CLTCL1-201ENST00000412649 ZNF541Q9H0D2 1346 aa13.94□□□□□ -0.18
CLTCL1-201ENST00000412649 ARPC2O15144 300 aa13.94□□□□□ -0.18
CLTCL1-201ENST00000412649 MTHFD1P11586 935 aaKnown RBP13.94□□□□□ -0.18
CLTCL1-201ENST00000412649 L1CAMP32004 1257 aa13.94□□□□□ -0.18
CLTCL1-201ENST00000412649 ALDH3B2P48448 385 aa13.94□□□□□ -0.18
CLTCL1-201ENST00000412649 CLCN3P51790 818 aa13.94□□□□□ -0.18
CLTCL1-201ENST00000412649 IST1P53990 364 aa13.94□□□□□ -0.18
CLTCL1-201ENST00000412649 UBE3AQ05086 875 aa13.94□□□□□ -0.18
CLTCL1-201ENST00000412649 RAD51Q06609 339 aa13.94□□□□□ -0.18
CLTCL1-201ENST00000412649 SKIV2LQ15477 1246 aaKnown RBP13.94□□□□□ -0.18
CLTCL1-201ENST00000412649 TIGD2Q4W5G0 525 aa13.94□□□□□ -0.18
CLTCL1-201ENST00000412649 SLC2A7Q6PXP3 512 aa13.94□□□□□ -0.18
CLTCL1-201ENST00000412649 ZNF567Q8N184 647 aa13.94□□□□□ -0.18
CLTCL1-201ENST00000412649 STX19Q8N4C7 294 aa13.94□□□□□ -0.18
CLTCL1-201ENST00000412649 CPSF7Q8N684 471 aaKnown RBP13.94□□□□□ -0.18
CLTCL1-201ENST00000412649 ATXN3LQ9H3M9 355 aa13.94□□□□□ -0.18
CLTCL1-201ENST00000412649 AURKAO14965 403 aa13.94□□□□□ -0.18
CLTCL1-201ENST00000412649 CILPO75339 1184 aa13.94□□□□□ -0.18
CLTCL1-201ENST00000412649 F7P08709 466 aaPredicted RBP13.94□□□□□ -0.18
CLTCL1-201ENST00000412649 GLDCP23378 1020 aa13.94□□□□□ -0.18
CLTCL1-201ENST00000412649 SLC26A3P40879 764 aa13.94□□□□□ -0.18
CLTCL1-201ENST00000412649 HLCSP50747 726 aa13.94□□□□□ -0.18
CLTCL1-201ENST00000412649 DNAJC14Q6Y2X3 702 aaPredicted RBP13.94□□□□□ -0.18
CLTCL1-201ENST00000412649 IGFN1Q86VF2 1251 aa13.94□□□□□ -0.18
CLTCL1-201ENST00000412649 FEM1CQ96JP0 617 aa13.94□□□□□ -0.18
CLTCL1-201ENST00000412649 TBCDQ9BTW9 1192 aa13.94□□□□□ -0.18
CLTCL1-201ENST00000412649 ZNF556Q9HAH1 456 aa13.94□□□□□ -0.18
CLTCL1-201ENST00000412649 SACM1LQ9NTJ5 587 aa13.94□□□□□ -0.18
CLTCL1-201ENST00000412649 ZNHIT2Q9UHR6 403 aa13.94□□□□□ -0.18
CLTCL1-201ENST00000412649 CNTN6Q9UQ52 1028 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms