RNA–Protein interactions for RNA: ENST00000411917.1

PTPA-208, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 3

Gene PTPA, Length 738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-208ENST00000411917 BBS9Q3SYG4 887 aa20.31■□□□□ 0.84
PTPA-208ENST00000411917 FAM153CQ494X1 144 aa20.31■□□□□ 0.84
PTPA-208ENST00000411917 PKN3Q6P5Z2 889 aa20.31■□□□□ 0.84
PTPA-208ENST00000411917 ERN2Q76MJ5 926 aaKnown RBP20.31■□□□□ 0.84
PTPA-208ENST00000411917 ZSWIM9Q86XI8 627 aa20.31■□□□□ 0.84
PTPA-208ENST00000411917 ZBED8Q8IZ13 594 aa20.31■□□□□ 0.84
PTPA-208ENST00000411917 AGGF1Q8N302 714 aaeCLIP20.31■□□□□ 0.84
PTPA-208ENST00000411917 SPEM1Q8N4L4 309 aa20.31■□□□□ 0.84
PTPA-208ENST00000411917 PPHLN1Q8NEY8 458 aaKnown RBP20.31■□□□□ 0.84
PTPA-208ENST00000411917 PYROXD1Q8WU10 500 aa20.31■□□□□ 0.84
PTPA-208ENST00000411917 STAMBPL1Q96FJ0 436 aa20.31■□□□□ 0.84
PTPA-208ENST00000411917 UHRF1Q96T88 793 aaPredicted RBP20.31■□□□□ 0.84
PTPA-208ENST00000411917 APOL2Q9BQE5 337 aa20.31■□□□□ 0.84
PTPA-208ENST00000411917 WDR83Q9BRX9 315 aaKnown RBP20.31■□□□□ 0.84
PTPA-208ENST00000411917 POLMQ9NP87 494 aaPredicted RBP20.31■□□□□ 0.84
PTPA-208ENST00000411917 SAYSD1Q9NPB0 183 aa20.31■□□□□ 0.84
PTPA-208ENST00000411917 DYRK4Q9NR20 520 aa20.31■□□□□ 0.84
PTPA-208ENST00000411917 SARDHQ9UL12 918 aa20.31■□□□□ 0.84
PTPA-208ENST00000411917 PSMD11O00231 422 aa20.3■□□□□ 0.84
PTPA-208ENST00000411917 DYNC1I1O14576 645 aa20.3■□□□□ 0.84
PTPA-208ENST00000411917 IL1BP01584 269 aa20.3■□□□□ 0.84
PTPA-208ENST00000411917 CYP2A6P11509 494 aaPredicted RBP20.3■□□□□ 0.84
PTPA-208ENST00000411917 TIMP2P16035 220 aa20.3■□□□□ 0.84
PTPA-208ENST00000411917 MGAT1P26572 445 aa20.3■□□□□ 0.84
PTPA-208ENST00000411917 HMGCLP35914 325 aa20.3■□□□□ 0.84
PTPA-208ENST00000411917 ELK3P41970 407 aa20.3■□□□□ 0.84
PTPA-208ENST00000411917 SESN2P58004 480 aaPredicted RBP20.3■□□□□ 0.84
PTPA-208ENST00000411917 RPS14P62263 151 aaKnown RBP20.3■□□□□ 0.84
PTPA-208ENST00000411917 CDKN3Q16667 212 aa20.3■□□□□ 0.84
PTPA-208ENST00000411917 BEND6Q5SZJ8 279 aaPredicted RBP20.3■□□□□ 0.84
PTPA-208ENST00000411917 CERCAMQ5T4B2 595 aa20.3■□□□□ 0.84
PTPA-208ENST00000411917 KIAA1211LQ6NV74 962 aa20.3■□□□□ 0.84
PTPA-208ENST00000411917 ERAP2Q6P179 960 aa20.3■□□□□ 0.84
PTPA-208ENST00000411917 PARS2Q7L3T8 475 aaKnown RBP20.3■□□□□ 0.84
PTPA-208ENST00000411917 KBTBD6Q86V97 674 aa20.3■□□□□ 0.84
PTPA-208ENST00000411917 MMAAQ8IVH4 418 aaKnown RBP20.3■□□□□ 0.84
PTPA-208ENST00000411917 SLC25A41Q8N5S1 370 aa20.3■□□□□ 0.84
PTPA-208ENST00000411917 DTX3LQ8TDB6 740 aa20.3■□□□□ 0.84
PTPA-208ENST00000411917 PDCD6IPQ8WUM4 868 aaKnown RBP20.3■□□□□ 0.84
PTPA-208ENST00000411917 SGSM3Q96HU1 749 aa20.3■□□□□ 0.84
PTPA-208ENST00000411917 PKNOX2Q96KN3 472 aa20.3■□□□□ 0.84
PTPA-208ENST00000411917 PABPC3Q9H361 631 aaKnown RBP20.3■□□□□ 0.84
PTPA-208ENST00000411917 SYBUQ9NX95 663 aa20.3■□□□□ 0.84
PTPA-208ENST00000411917 FZD4Q9ULV1 537 aa20.3■□□□□ 0.84
PTPA-208ENST00000411917 MTF2Q9Y483 593 aaPredicted RBP20.3■□□□□ 0.84
PTPA-208ENST00000411917 RGSL1A5PLK6 1076 aa20.29■□□□□ 0.84
PTPA-208ENST00000411917 KPNA3O00505 521 aaPredicted RBP20.29■□□□□ 0.84
PTPA-208ENST00000411917 AREL1O15033 823 aa20.29■□□□□ 0.84
PTPA-208ENST00000411917 LDB2O43679 373 aa20.29■□□□□ 0.84
PTPA-208ENST00000411917 IGLV3-19P01714 112 aa20.29■□□□□ 0.84
PTPA-208ENST00000411917 POLBP06746 335 aa20.29■□□□□ 0.84
PTPA-208ENST00000411917 ADRB3P13945 408 aa20.29■□□□□ 0.84
PTPA-208ENST00000411917 PMS2P54278 862 aa20.29■□□□□ 0.84
PTPA-208ENST00000411917 PTPN5P54829 565 aa20.29■□□□□ 0.84
PTPA-208ENST00000411917 SPANXN3Q5MJ09 141 aa20.29■□□□□ 0.84
PTPA-208ENST00000411917 ZDHHC20Q5W0Z9 365 aa20.29■□□□□ 0.84
PTPA-208ENST00000411917 DPPA4Q7L190 304 aa20.29■□□□□ 0.84
PTPA-208ENST00000411917 KDELC2Q7Z4H8 507 aa20.29■□□□□ 0.84
PTPA-208ENST00000411917 GSPT2Q8IYD1 628 aaKnown RBP20.29■□□□□ 0.84
PTPA-208ENST00000411917 FBXO36Q8NEA4 188 aa20.29■□□□□ 0.84
PTPA-208ENST00000411917 STYXQ8WUJ0 223 aa20.29■□□□□ 0.84
PTPA-208ENST00000411917 ANKRD7Q92527 254 aa20.29■□□□□ 0.84
PTPA-208ENST00000411917 ARRDC3Q96B67 414 aa20.29■□□□□ 0.84
PTPA-208ENST00000411917 PWWP2AQ96N64 755 aa20.29■□□□□ 0.84
PTPA-208ENST00000411917 MKRN2Q9H000 416 aaKnown RBP20.29■□□□□ 0.84
PTPA-208ENST00000411917 CDH19Q9H159 772 aa20.29■□□□□ 0.84
PTPA-208ENST00000411917 CDC42EP4Q9H3Q1 356 aaKnown RBP20.29■□□□□ 0.84
PTPA-208ENST00000411917 KDM4CQ9H3R0 1056 aa20.29■□□□□ 0.84
PTPA-208ENST00000411917 ARFGAP3Q9NP61 516 aa20.29■□□□□ 0.84
PTPA-208ENST00000411917 TREX1Q9NSU2 369 aa20.29■□□□□ 0.84
PTPA-208ENST00000411917 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.29■□□□□ 0.84
PTPA-208ENST00000411917 NFKBIL1Q9UBC1 381 aaPredicted RBP20.29■□□□□ 0.84
PTPA-208ENST00000411917 ZC3H7BQ9UGR2 993 aaKnown RBP20.29■□□□□ 0.84
PTPA-208ENST00000411917 SIT1Q9Y3P8 196 aa20.29■□□□□ 0.84
PTPA-208ENST00000411917 C2orf81A6NN90 581 aa20.28■□□□□ 0.84
PTPA-208ENST00000411917 H7C0S8 307 aa20.28■□□□□ 0.84
PTPA-208ENST00000411917 ALDH1A2O94788 518 aa20.28■□□□□ 0.84
PTPA-208ENST00000411917 COL9A1P20849 921 aa20.28■□□□□ 0.84
PTPA-208ENST00000411917 VIPR1P32241 457 aa20.28■□□□□ 0.84
PTPA-208ENST00000411917 SLC8A1P32418 973 aa20.28■□□□□ 0.84
PTPA-208ENST00000411917 DRD3P35462 400 aa20.28■□□□□ 0.84
PTPA-208ENST00000411917 MMP12P39900 470 aa20.28■□□□□ 0.84
PTPA-208ENST00000411917 WASP42768 502 aa20.28■□□□□ 0.84
PTPA-208ENST00000411917 TTC31Q49AM3 519 aaPredicted RBP20.28■□□□□ 0.84
PTPA-208ENST00000411917 TMEM92Q6UXU6 159 aa20.28■□□□□ 0.84
PTPA-208ENST00000411917 Q6ZS52 159 aa20.28■□□□□ 0.84
PTPA-208ENST00000411917 TRIM67Q6ZTA4 783 aa20.28■□□□□ 0.84
PTPA-208ENST00000411917 CCDC25Q86WR0 208 aa20.28■□□□□ 0.84
PTPA-208ENST00000411917 TMPRSS6Q8IU80 811 aa20.28■□□□□ 0.84
PTPA-208ENST00000411917 CBARPQ8N350 705 aaPredicted RBP20.28■□□□□ 0.84
PTPA-208ENST00000411917 TTC30BQ8N4P2 665 aa20.28■□□□□ 0.84
PTPA-208ENST00000411917 CAMKK1Q8N5S9 505 aa20.28■□□□□ 0.84
PTPA-208ENST00000411917 SCG3Q8WXD2 468 aaKnown RBP20.28■□□□□ 0.84
PTPA-208ENST00000411917 FOXQ1Q9C009 403 aa20.28■□□□□ 0.84
PTPA-208ENST00000411917 KCTD5Q9NXV2 234 aa20.28■□□□□ 0.84
PTPA-208ENST00000411917 ZNF711Q9Y462 761 aa20.28■□□□□ 0.84
PTPA-208ENST00000411917 DNTTP04053 509 aa20.27■□□□□ 0.84
PTPA-208ENST00000411917 PAMP19021 973 aa20.27■□□□□ 0.84
PTPA-208ENST00000411917 LPOP22079 712 aaPredicted RBP20.27■□□□□ 0.84
PTPA-208ENST00000411917 PHBP35232 272 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms