RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 NUCB2P80303 420 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 GOLGA8FQ08AF8 430 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 DMWDQ09019 674 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 GALNT2Q10471 571 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 CAMK1Q14012 370 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 GPR68Q15743 365 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 TDRD12Q587J7 1177 aaKnown RBP2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 RUNDC3AQ59EK9 446 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 FSCBQ5H9T9 825 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 DCAF12L2Q5VW00 463 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 MZT2BQ6NZ67 158 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 ZNF474Q6S9Z5 364 aaPredicted RBP2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 C4orf50Q6ZRC1 276 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 TBC1D1Q86TI0 1168 aaPredicted RBP2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 FJX1Q86VR8 437 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 ARMC8Q8IUR7 673 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 ADGRF3Q8IZF5 1079 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 CLIP4Q8N3C7 705 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 EXD3Q8N9H8 876 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 TBC1D22AQ8WUA7 517 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 TMED6Q8WW62 240 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 APOPT1Q96IL0 206 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 CD180Q99467 661 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 C1QTNF5Q9BXJ0 243 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 CLPBQ9H078 707 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 RWDD1Q9H446 243 aaPredicted RBP2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 ACAD9Q9H845 621 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 IL21RQ9HBE5 538 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 MED4Q9NPJ6 270 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 PPP1R14DQ9NXH3 145 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 RAI14Q9P0K7 980 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 POLKQ9UBT6 870 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 KLQ9UEF7 1012 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 RSPH14Q9UHP6 348 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 PCDHAC2Q9Y5I4 1007 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 SCINQ9Y6U3 715 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 LAMC1P11047 1609 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 CARMIL1Q5VZK9 1371 aa2.59□□□□□ -2
HMGB3P2-201ENST00000411913 ANKRD36BQ8N2N9 1353 aa2.59□□□□□ -2
HMGB3P2-201ENST00000411913 PIK3C2GO75747 1445 aa2.59□□□□□ -2
HMGB3P2-201ENST00000411913 PTPRGP23470 1445 aa2.59□□□□□ -2
HMGB3P2-201ENST00000411913 ATAD2BQ9ULI0 1458 aa2.58□□□□□ -2
HMGB3P2-201ENST00000411913 CFAP65Q6ZU64 1925 aaKnown RBP2.58□□□□□ -2
HMGB3P2-201ENST00000411913 REREQ9P2R6 1566 aa2.58□□□□□ -2
HMGB3P2-201ENST00000411913 KIF21AQ7Z4S6 1674 aa2.58□□□□□ -2
HMGB3P2-201ENST00000411913 GAGE10A6NGK3 116 aa2.58□□□□□ -2
HMGB3P2-201ENST00000411913 SH2D7A6NKC9 451 aaPredicted RBP2.58□□□□□ -2
HMGB3P2-201ENST00000411913 FOXO6A8MYZ6 492 aa2.58□□□□□ -2
HMGB3P2-201ENST00000411913 LIASO43766 372 aa2.58□□□□□ -2
HMGB3P2-201ENST00000411913 CCNT1O60563 726 aaKnown RBP2.58□□□□□ -2
HMGB3P2-201ENST00000411913 LMX1BO60663 402 aa2.58□□□□□ -2
HMGB3P2-201ENST00000411913 RPS6KA5O75582 802 aa2.58□□□□□ -2
HMGB3P2-201ENST00000411913 CNTN5O94779 1100 aa2.58□□□□□ -2
HMGB3P2-201ENST00000411913 RTN3O95197 1032 aaPredicted RBP2.58□□□□□ -2
HMGB3P2-201ENST00000411913 TBX18O95935 607 aa2.58□□□□□ -2
HMGB3P2-201ENST00000411913 MBD3O95983 291 aa2.58□□□□□ -2
HMGB3P2-201ENST00000411913 F9P00740 461 aa2.58□□□□□ -2
HMGB3P2-201ENST00000411913 ALDOCP09972 364 aaKnown RBP2.58□□□□□ -2
HMGB3P2-201ENST00000411913 RFPL3SP0C7P2 107 aa2.58□□□□□ -2
HMGB3P2-201ENST00000411913 CYP4B1P13584 511 aa2.58□□□□□ -2
HMGB3P2-201ENST00000411913 H2AFXP16104 143 aaPredicted RBP2.58□□□□□ -2
HMGB3P2-201ENST00000411913 PRKCHP24723 683 aa2.58□□□□□ -2
HMGB3P2-201ENST00000411913 ABCD3P28288 659 aa2.58□□□□□ -2
HMGB3P2-201ENST00000411913 AVPR2P30518 371 aa2.58□□□□□ -2
HMGB3P2-201ENST00000411913 GTF2A1P52655 376 aaPredicted RBP2.58□□□□□ -2
HMGB3P2-201ENST00000411913 CRIP2P52943 208 aaPredicted RBP2.58□□□□□ -2
HMGB3P2-201ENST00000411913 OAZ1P54368 228 aa2.58□□□□□ -2
HMGB3P2-201ENST00000411913 ADPRHP54922 357 aa2.58□□□□□ -2
HMGB3P2-201ENST00000411913 RPP30P78346 268 aaKnown RBP2.58□□□□□ -2
HMGB3P2-201ENST00000411913 ARHGAP8P85298 464 aa2.58□□□□□ -2
HMGB3P2-201ENST00000411913 SHC2P98077 582 aa2.58□□□□□ -2
HMGB3P2-201ENST00000411913 NFIL3Q16649 462 aa2.58□□□□□ -2
HMGB3P2-201ENST00000411913 PRICKLE4Q2TBC4 344 aa2.58□□□□□ -2
HMGB3P2-201ENST00000411913 HSP90AB3PQ58FF7 597 aa2.58□□□□□ -2
HMGB3P2-201ENST00000411913 CAVIN1Q6NZI2 390 aaKnown RBP2.58□□□□□ -2
HMGB3P2-201ENST00000411913 MTFR2Q6P444 385 aa2.58□□□□□ -2
HMGB3P2-201ENST00000411913 INO80CQ6PI98 192 aaPredicted RBP2.58□□□□□ -2
HMGB3P2-201ENST00000411913 GALNT7Q86SF2 657 aa2.58□□□□□ -2
HMGB3P2-201ENST00000411913 TICAM2Q86XR7 235 aa2.58□□□□□ -2
HMGB3P2-201ENST00000411913 DCUN1D3Q8IWE4 304 aa2.58□□□□□ -2
HMGB3P2-201ENST00000411913 SCN4BQ8IWT1 228 aa2.58□□□□□ -2
HMGB3P2-201ENST00000411913 ZNF485Q8NCK3 441 aa2.58□□□□□ -2
HMGB3P2-201ENST00000411913 ZNF397Q8NF99 534 aaPredicted RBP2.58□□□□□ -2
HMGB3P2-201ENST00000411913 OR14A16Q8NHC5 309 aa2.58□□□□□ -2
HMGB3P2-201ENST00000411913 TDRD7Q8NHU6 1098 aaKnown RBP2.58□□□□□ -2
HMGB3P2-201ENST00000411913 NCSTNQ92542 709 aa2.58□□□□□ -2
HMGB3P2-201ENST00000411913 KCNJ9Q92806 393 aa2.58□□□□□ -2
HMGB3P2-201ENST00000411913 ZBTB10Q96DT7 871 aa2.58□□□□□ -2
HMGB3P2-201ENST00000411913 RNFT2Q96EX2 444 aa2.58□□□□□ -2
HMGB3P2-201ENST00000411913 GPR78Q96P69 363 aa2.58□□□□□ -2
HMGB3P2-201ENST00000411913 TESK2Q96S53 571 aa2.58□□□□□ -2
HMGB3P2-201ENST00000411913 FUCA2Q9BTY2 467 aa2.58□□□□□ -2
HMGB3P2-201ENST00000411913 ABHD14AQ9BUJ0 271 aa2.58□□□□□ -2
HMGB3P2-201ENST00000411913 HDHD5Q9BXW7 423 aa2.58□□□□□ -2
HMGB3P2-201ENST00000411913 TRIM31Q9BZY9 425 aa2.58□□□□□ -2
HMGB3P2-201ENST00000411913 INTS2Q9H0H0 1204 aaKnown RBP2.58□□□□□ -2
HMGB3P2-201ENST00000411913 OSBPL5Q9H0X9 879 aaPredicted RBP2.58□□□□□ -2
HMGB3P2-201ENST00000411913 TLR8Q9NR97 1041 aaKnown RBP2.58□□□□□ -2
HMGB3P2-201ENST00000411913 OLA1Q9NTK5 396 aaKnown RBP2.58□□□□□ -2
HMGB3P2-201ENST00000411913 TBC1D22BQ9NU19 505 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms