RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 CPOXP36551 454 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 MMP13P45452 471 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 LMAN1P49257 510 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 KRTAP10-5P60370 271 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 PTP4A2Q12974 167 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 AIMP2Q13155 320 aaKnown RBP2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 GAB1Q13480 694 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 KRT32Q14532 448 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 TRIP6Q15654 476 aaKnown RBP2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 PKN2Q16513 984 aaKnown RBP2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 SLC18A3Q16572 532 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 TSTQ16762 297 aaKnown RBP2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 AP5B1Q2VPB7 878 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 ARL13AQ5H913 290 aaPredicted RBP2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 SERTAD4-AS1Q5TG53 156 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 PXDC1Q5TGL8 231 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 SPATA1Q5VX52 437 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 HMBOX1Q6NT76 420 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 CYP20A1Q6UW02 462 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 B4GALNT4Q76KP1 1039 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 FASTKD5Q7L8L6 764 aaKnown RBP2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 PRSS45Q7RTY3 260 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 MDGA2Q7Z553 956 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 MRPL10Q7Z7H8 261 aaKnown RBP2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 FAM160B2Q86V87 743 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 CHD1LQ86WJ1 897 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 TICAM1Q8IUC6 712 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 CNGA4Q8IV77 575 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 TEX11Q8IYF3 940 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 HACE1Q8IYU2 909 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 TMTC2Q8N394 836 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 SLC25A41Q8N5S1 370 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 RUFY2Q8WXA3 655 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 LPAR1Q92633 364 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 MAP4K1Q92918 833 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 ABHD8Q96I13 439 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 COG3Q96JB2 828 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 ZNF347Q96SE7 839 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 MACROD1Q9BQ69 325 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 TRMOQ9BU70 441 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 MAK16Q9BXY0 300 aaKnown RBP2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 PLEKHA5Q9HAU0 1116 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 BRF2Q9HAW0 419 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 MOV10Q9HCE1 1003 aaKnown RBP2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 Q9N2J8 555 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 DECR2Q9NUI1 292 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 TMEM45AQ9NWC5 275 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 KIAA1456Q9P272 454 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 SLC25A10Q9UBX3 287 aaPredicted RBP2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 SERGEFQ9UGK8 458 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 ZNF112Q9UJU3 913 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 AGO2Q9UKV8 859 aaKnown RBP2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 ICKQ9UPZ9 632 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 CAMK2AQ9UQM7 478 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 LAMP3Q9UQV4 416 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 TMEM5Q9Y2B1 443 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 CARD8Q9Y2G2 431 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 TTLL3Q9Y4R7 772 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 SRPRBQ9Y5M8 271 aaKnown RBP2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 PAPPAQ13219 1627 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 PHRF1Q9P1Y6 1649 aaKnown RBP2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 CNTNAP1P78357 1384 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 KTN1Q86UP2 1357 aaKnown RBP2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 PALLDQ8WX93 1383 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 ZNF804BA4D1E1 1349 aa2.73□□□□□ -1.97
RNU6-1140P-201ENST00000410517 UTYO14607 1347 aa2.73□□□□□ -1.97
RNU6-1140P-201ENST00000410517 A0A1W2PRG0 241 aa2.73□□□□□ -1.97
RNU6-1140P-201ENST00000410517 PI4KAP2A4QPH2 592 aa2.73□□□□□ -1.97
RNU6-1140P-201ENST00000410517 PGPEP1LA6NFU8 196 aa2.73□□□□□ -1.97
RNU6-1140P-201ENST00000410517 MANSC4A6NHS7 340 aaPredicted RBP2.73□□□□□ -1.97
RNU6-1140P-201ENST00000410517 FAM90A7PA6NKC0 464 aa2.73□□□□□ -1.97
RNU6-1140P-201ENST00000410517 C2CD4BA6NLJ0 364 aa2.73□□□□□ -1.97
RNU6-1140P-201ENST00000410517 KRTAP9-6A8MVA2 160 aa2.73□□□□□ -1.97
RNU6-1140P-201ENST00000410517 FAM90A22PA8MWA6 464 aa2.73□□□□□ -1.97
RNU6-1140P-201ENST00000410517 FAM90A12PA8MX19 464 aa2.73□□□□□ -1.97
RNU6-1140P-201ENST00000410517 FAM90A23PA8MXZ1 464 aa2.73□□□□□ -1.97
RNU6-1140P-201ENST00000410517 FOXO6A8MYZ6 492 aa2.73□□□□□ -1.97
RNU6-1140P-201ENST00000410517 EBAG9O00559 213 aa2.73□□□□□ -1.97
RNU6-1140P-201ENST00000410517 RNASEH2AO75792 299 aaKnown RBP2.73□□□□□ -1.97
RNU6-1140P-201ENST00000410517 KAT7O95251 611 aa2.73□□□□□ -1.97
RNU6-1140P-201ENST00000410517 IPO7O95373 1038 aaKnown RBP2.73□□□□□ -1.97
RNU6-1140P-201ENST00000410517 DDAH2O95865 285 aa2.73□□□□□ -1.97
RNU6-1140P-201ENST00000410517 ADAP00813 363 aa2.73□□□□□ -1.97
RNU6-1140P-201ENST00000410517 KLKB1P03952 638 aa2.73□□□□□ -1.97
RNU6-1140P-201ENST00000410517 MMP10P09238 476 aa2.73□□□□□ -1.97
RNU6-1140P-201ENST00000410517 CYP2D6P10635 497 aa2.73□□□□□ -1.97
RNU6-1140P-201ENST00000410517 NFKBIAP25963 317 aa2.73□□□□□ -1.97
RNU6-1140P-201ENST00000410517 EPHB2P29323 1055 aa2.73□□□□□ -1.97
RNU6-1140P-201ENST00000410517 HOXA7P31268 230 aaPredicted RBP2.73□□□□□ -1.97
RNU6-1140P-201ENST00000410517 IDUAP35475 653 aa2.73□□□□□ -1.97
RNU6-1140P-201ENST00000410517 GGT5P36269 586 aa2.73□□□□□ -1.97
RNU6-1140P-201ENST00000410517 PPARGP37231 505 aaPredicted RBP2.73□□□□□ -1.97
RNU6-1140P-201ENST00000410517 POLD2P49005 469 aa2.73□□□□□ -1.97
RNU6-1140P-201ENST00000410517 AMPHP49418 695 aa2.73□□□□□ -1.97
RNU6-1140P-201ENST00000410517 ENTPD1P49961 510 aa2.73□□□□□ -1.97
RNU6-1140P-201ENST00000410517 RAD23BP54727 409 aa2.73□□□□□ -1.97
RNU6-1140P-201ENST00000410517 UFM1P61960 85 aa2.73□□□□□ -1.97
RNU6-1140P-201ENST00000410517 DCAF7P61962 342 aa2.73□□□□□ -1.97
RNU6-1140P-201ENST00000410517 ZBED6P86452 979 aa2.73□□□□□ -1.97
RNU6-1140P-201ENST00000410517 ITGADQ13349 1161 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms