RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 NQO1P15559 274 aaKnown RBP7.55□□□□□ -1.2
CXCR4-202ENST00000409817 CD86P42081 329 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 CD151P48509 253 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 KCNQ1P51787 676 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 HK2P52789 917 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 EPHB3P54753 998 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 RACK1P63244 317 aaKnown RBP7.55□□□□□ -1.2
CXCR4-202ENST00000409817 POU4F1Q01851 419 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 ZBTB16Q05516 673 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 ASPHQ12797 758 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 OVGP1Q12889 678 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 KRT72Q14CN4 511 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 PCLAFQ15004 111 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 ADGRF1Q5T601 910 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 TSTD2Q5T7W7 516 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 NEPROQ6NW34 567 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 ESRP1Q6NXG1 681 aaKnown RBP7.55□□□□□ -1.2
CXCR4-202ENST00000409817 CYB5D1Q6P9G0 228 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 CLNKQ7Z7G1 428 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 RFWD2Q8NHY2 731 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 PIWIL2Q8TC59 973 aaKnown RBP7.55□□□□□ -1.2
CXCR4-202ENST00000409817 SKA1Q96BD8 255 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 PSKH2Q96QS6 385 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 MGME1Q9BQP7 344 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 MECRQ9BV79 373 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 KCNK13Q9HB14 408 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 NMRAL1Q9HBL8 299 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 MRPL17Q9NRX2 175 aaKnown RBP7.55□□□□□ -1.2
CXCR4-202ENST00000409817 TMEM216Q9P0N5 145 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 GGT7Q9UJ14 662 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 CORO1CQ9ULV4 474 aaPredicted RBP7.55□□□□□ -1.2
CXCR4-202ENST00000409817 RPL26L1Q9UNX3 145 aaKnown RBP7.55□□□□□ -1.2
CXCR4-202ENST00000409817 ATP11BQ9Y2G3 1177 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 TBC1D30Q9Y2I9 924 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 COL4A6Q14031 1691 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 MIA3Q5JRA6 1907 aa7.54□□□□□ -1.2
CXCR4-202ENST00000409817 A0A087X1B8 175 aa7.54□□□□□ -1.2
CXCR4-202ENST00000409817 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.54□□□□□ -1.2
CXCR4-202ENST00000409817 DCDC2BA2VCK2 349 aa7.54□□□□□ -1.2
CXCR4-202ENST00000409817 SLC35F4A4IF30 521 aa7.54□□□□□ -1.2
CXCR4-202ENST00000409817 MROH6A6NGR9 719 aa7.54□□□□□ -1.2
CXCR4-202ENST00000409817 GIPC1O14908 333 aa7.54□□□□□ -1.2
CXCR4-202ENST00000409817 KDELR3O43731 214 aa7.54□□□□□ -1.2
CXCR4-202ENST00000409817 MGRN1O60291 552 aa7.54□□□□□ -1.2
CXCR4-202ENST00000409817 MAN1A2O60476 641 aa7.54□□□□□ -1.2
CXCR4-202ENST00000409817 STC2O76061 302 aa7.54□□□□□ -1.2
CXCR4-202ENST00000409817 HAUS5O94927 633 aa7.54□□□□□ -1.2
CXCR4-202ENST00000409817 TIMP1P01033 207 aa7.54□□□□□ -1.2
CXCR4-202ENST00000409817 AHSGP02765 367 aa7.54□□□□□ -1.2
CXCR4-202ENST00000409817 MYL2P10916 166 aa7.54□□□□□ -1.2
CXCR4-202ENST00000409817 RALBP11234 206 aa7.54□□□□□ -1.2
CXCR4-202ENST00000409817 STMN1P16949 149 aa7.54□□□□□ -1.2
CXCR4-202ENST00000409817 RPL17P18621 184 aaKnown RBP7.54□□□□□ -1.2
CXCR4-202ENST00000409817 ARNTP27540 789 aa7.54□□□□□ -1.2
CXCR4-202ENST00000409817 CORO1AP31146 461 aaKnown RBP7.54□□□□□ -1.2
CXCR4-202ENST00000409817 SLC6A4P31645 630 aa7.54□□□□□ -1.2
CXCR4-202ENST00000409817 SLC26A3P40879 764 aa7.54□□□□□ -1.2
CXCR4-202ENST00000409817 SLC1A6P48664 564 aa7.54□□□□□ -1.2
CXCR4-202ENST00000409817 CLCN5P51795 746 aa7.54□□□□□ -1.2
CXCR4-202ENST00000409817 RAB10P61026 200 aa7.54□□□□□ -1.2
CXCR4-202ENST00000409817 DSC2Q02487 901 aa7.54□□□□□ -1.2
CXCR4-202ENST00000409817 PTSQ03393 145 aa7.54□□□□□ -1.2
CXCR4-202ENST00000409817 ACVR1Q04771 509 aa7.54□□□□□ -1.2
CXCR4-202ENST00000409817 TNP2Q05952 138 aa7.54□□□□□ -1.2
CXCR4-202ENST00000409817 NSUN2Q08J23 767 aaKnown RBP eCLIP7.54□□□□□ -1.2
CXCR4-202ENST00000409817 ZNF177Q13360 481 aaPredicted RBP7.54□□□□□ -1.2
CXCR4-202ENST00000409817 MSLNQ13421 630 aaPredicted RBP7.54□□□□□ -1.2
CXCR4-202ENST00000409817 GRM2Q14416 872 aa7.54□□□□□ -1.2
CXCR4-202ENST00000409817 USP10Q14694 798 aaKnown RBP7.54□□□□□ -1.2
CXCR4-202ENST00000409817 GRM3Q14832 879 aa7.54□□□□□ -1.2
CXCR4-202ENST00000409817 CNGA3Q16281 694 aa7.54□□□□□ -1.2
CXCR4-202ENST00000409817 PCSK7Q16549 785 aa7.54□□□□□ -1.2
CXCR4-202ENST00000409817 RALGPS1Q5JS13 557 aa7.54□□□□□ -1.2
CXCR4-202ENST00000409817 RAPH1Q70E73 1250 aa7.54□□□□□ -1.2
CXCR4-202ENST00000409817 CMC1Q7Z7K0 106 aa7.54□□□□□ -1.2
CXCR4-202ENST00000409817 MTDHQ86UE4 582 aaKnown RBP7.54□□□□□ -1.2
CXCR4-202ENST00000409817 ARID3BQ8IVW6 561 aaPredicted RBP7.54□□□□□ -1.2
CXCR4-202ENST00000409817 TMEM199Q8N511 208 aa7.54□□□□□ -1.2
CXCR4-202ENST00000409817 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.54□□□□□ -1.2
CXCR4-202ENST00000409817 OR6Y1Q8NGX8 325 aa7.54□□□□□ -1.2
CXCR4-202ENST00000409817 STON2Q8WXE9 905 aa7.54□□□□□ -1.2
CXCR4-202ENST00000409817 TSPAN17Q96FV3 270 aa7.54□□□□□ -1.2
CXCR4-202ENST00000409817 ZNF333Q96JL9 665 aa7.54□□□□□ -1.2
CXCR4-202ENST00000409817 ZNF778Q96MU6 729 aa7.54□□□□□ -1.2
CXCR4-202ENST00000409817 KLHL5Q96PQ7 755 aa7.54□□□□□ -1.2
CXCR4-202ENST00000409817 MFSD1Q9H3U5 465 aa7.54□□□□□ -1.2
CXCR4-202ENST00000409817 IL1RAPL1Q9NZN1 696 aa7.54□□□□□ -1.2
CXCR4-202ENST00000409817 HEY2Q9UBP5 337 aa7.54□□□□□ -1.2
CXCR4-202ENST00000409817 UBA2Q9UBT2 640 aaPredicted RBP7.54□□□□□ -1.2
CXCR4-202ENST00000409817 FAM8A1Q9UBU6 413 aa7.54□□□□□ -1.2
CXCR4-202ENST00000409817 FBXO5Q9UKT4 447 aa7.54□□□□□ -1.2
CXCR4-202ENST00000409817 SLC39A10Q9ULF5 831 aa7.54□□□□□ -1.2
CXCR4-202ENST00000409817 ACOT9Q9Y305 439 aa7.54□□□□□ -1.2
CXCR4-202ENST00000409817 ZFP37Q9Y6Q3 630 aaPredicted RBP7.54□□□□□ -1.2
CXCR4-202ENST00000409817 FAM95CA0A1B0GW59 222 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 TYW5A2RUC4 315 aaKnown RBP7.53□□□□□ -1.2
CXCR4-202ENST00000409817 H3BNC9 293 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 PRRG1O14668 218 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 KIAA0355O15063 1070 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 ATXN7O15265 892 aaPredicted RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms