RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.51□□□□□ -0.41
CHMP3-204ENST00000409727 TMEM120BA0PK00 339 aa12.51□□□□□ -0.41
CHMP3-204ENST00000409727 TBC1D3BA6NDS4 549 aa12.51□□□□□ -0.41
CHMP3-204ENST00000409727 KRT38O76015 456 aa12.51□□□□□ -0.41
CHMP3-204ENST00000409727 UGT2B4P06133 528 aa12.51□□□□□ -0.41
CHMP3-204ENST00000409727 SNRPAP09012 282 aaKnown RBP12.51□□□□□ -0.41
CHMP3-204ENST00000409727 DLDP09622 509 aaKnown RBP12.51□□□□□ -0.41
CHMP3-204ENST00000409727 MAPK8P45983 427 aa12.51□□□□□ -0.41
CHMP3-204ENST00000409727 SOX9P48436 509 aa12.51□□□□□ -0.41
CHMP3-204ENST00000409727 ARCN1P48444 511 aaKnown RBP12.51□□□□□ -0.41
CHMP3-204ENST00000409727 CSNK1DP48730 415 aa12.51□□□□□ -0.41
CHMP3-204ENST00000409727 ARSDP51689 593 aa12.51□□□□□ -0.41
CHMP3-204ENST00000409727 PRAMEP78395 509 aa12.51□□□□□ -0.41
CHMP3-204ENST00000409727 SEMG2Q02383 582 aa12.51□□□□□ -0.41
CHMP3-204ENST00000409727 LGSNQ5TDP6 509 aa12.51□□□□□ -0.41
CHMP3-204ENST00000409727 ARFGAP2Q8N6H7 521 aa12.51□□□□□ -0.41
CHMP3-204ENST00000409727 PNPLA1Q8N8W4 532 aa12.51□□□□□ -0.41
CHMP3-204ENST00000409727 WFIKKN2Q8TEU8 576 aa12.51□□□□□ -0.41
CHMP3-204ENST00000409727 PTPRN2Q92932 1015 aa12.51□□□□□ -0.41
CHMP3-204ENST00000409727 HDAC10Q969S8 669 aa12.51□□□□□ -0.41
CHMP3-204ENST00000409727 NECTIN4Q96NY8 510 aa12.51□□□□□ -0.41
CHMP3-204ENST00000409727 BPIFA1Q9NP55 256 aa12.51□□□□□ -0.41
CHMP3-204ENST00000409727 ELOVL2Q9NXB9 296 aa12.51□□□□□ -0.41
CHMP3-204ENST00000409727 SLC27A6Q9Y2P4 619 aa12.51□□□□□ -0.41
CHMP3-204ENST00000409727 HMX2A2RU54 273 aa12.51□□□□□ -0.41
CHMP3-204ENST00000409727 ANTXRLA6NF34 631 aa12.51□□□□□ -0.41
CHMP3-204ENST00000409727 TRAFD1O14545 582 aaPredicted RBP12.51□□□□□ -0.41
CHMP3-204ENST00000409727 FZD6O60353 706 aa12.51□□□□□ -0.41
CHMP3-204ENST00000409727 ECI2O75521 394 aa12.51□□□□□ -0.41
CHMP3-204ENST00000409727 CRTAMO95727 393 aa12.51□□□□□ -0.41
CHMP3-204ENST00000409727 GSRP00390 522 aa12.51□□□□□ -0.41
CHMP3-204ENST00000409727 CHN1P15882 459 aa12.51□□□□□ -0.41
CHMP3-204ENST00000409727 POU3F3P20264 500 aaPredicted RBP12.51□□□□□ -0.41
CHMP3-204ENST00000409727 GP5P40197 560 aa12.51□□□□□ -0.41
CHMP3-204ENST00000409727 OPRD1P41143 372 aa12.51□□□□□ -0.41
CHMP3-204ENST00000409727 ST8SIA6P61647 398 aa12.51□□□□□ -0.41
CHMP3-204ENST00000409727 MPP1Q00013 466 aa12.51□□□□□ -0.41
CHMP3-204ENST00000409727 NAB1Q13506 487 aa12.51□□□□□ -0.41
CHMP3-204ENST00000409727 FRG1Q14331 258 aaKnown RBP12.51□□□□□ -0.41
CHMP3-204ENST00000409727 POM121L1PQ3SYA9 428 aa12.51□□□□□ -0.41
CHMP3-204ENST00000409727 FNDC3BQ53EP0 1204 aaKnown RBP12.51□□□□□ -0.41
CHMP3-204ENST00000409727 LRRC73Q5JTD7 316 aa12.51□□□□□ -0.41
CHMP3-204ENST00000409727 ZNF470Q6ECI4 717 aa12.51□□□□□ -0.41
CHMP3-204ENST00000409727 KIAA0930Q6ICG6 404 aaPredicted RBP12.51□□□□□ -0.41
CHMP3-204ENST00000409727 ZSWIM9Q86XI8 627 aa12.51□□□□□ -0.41
CHMP3-204ENST00000409727 OR2A12Q8NGT7 310 aa12.51□□□□□ -0.41
CHMP3-204ENST00000409727 FRS2Q8WU20 508 aa12.51□□□□□ -0.41
CHMP3-204ENST00000409727 PIH1D2Q8WWB5 315 aa12.51□□□□□ -0.41
CHMP3-204ENST00000409727 TBATAQ96M53 351 aa12.51□□□□□ -0.41
CHMP3-204ENST00000409727 CPNE1Q99829 537 aa12.51□□□□□ -0.41
CHMP3-204ENST00000409727 BRD9Q9H8M2 597 aa12.51□□□□□ -0.41
CHMP3-204ENST00000409727 SLC8A2Q9UPR5 921 aa12.51□□□□□ -0.41
CHMP3-204ENST00000409727 KIF26AQ9ULI4 1882 aaPredicted RBP12.5□□□□□ -0.41
CHMP3-204ENST00000409727 COL4A3Q01955 1670 aa12.5□□□□□ -0.41
CHMP3-204ENST00000409727 DENND4AQ7Z401 1863 aa12.5□□□□□ -0.41
CHMP3-204ENST00000409727 CXorf51AA0A1B0GTR3 108 aa12.5□□□□□ -0.41
CHMP3-204ENST00000409727 GRXCR2A6NFK2 248 aa12.5□□□□□ -0.41
CHMP3-204ENST00000409727 C2orf81A6NN90 581 aa12.5□□□□□ -0.41
CHMP3-204ENST00000409727 POP4O95707 220 aaKnown RBP12.5□□□□□ -0.41
CHMP3-204ENST00000409727 PYGBP11216 843 aa12.5□□□□□ -0.41
CHMP3-204ENST00000409727 HLA-EP13747 358 aa12.5□□□□□ -0.41
CHMP3-204ENST00000409727 SLC1A2P43004 574 aa12.5□□□□□ -0.41
CHMP3-204ENST00000409727 GRIA4P48058 902 aa12.5□□□□□ -0.41
CHMP3-204ENST00000409727 SERPINB9P50453 376 aa12.5□□□□□ -0.41
CHMP3-204ENST00000409727 RAD51Q06609 339 aa12.5□□□□□ -0.41
CHMP3-204ENST00000409727 MPP2Q14168 576 aa12.5□□□□□ -0.41
CHMP3-204ENST00000409727 COL19A1Q14993 1142 aa12.5□□□□□ -0.41
CHMP3-204ENST00000409727 LRRC14Q15048 493 aa12.5□□□□□ -0.41
CHMP3-204ENST00000409727 TAF1AQ15573 450 aaPredicted RBP12.5□□□□□ -0.41
CHMP3-204ENST00000409727 NEPROQ6NW34 567 aa12.5□□□□□ -0.41
CHMP3-204ENST00000409727 ZNF449Q6P9G9 518 aa12.5□□□□□ -0.41
CHMP3-204ENST00000409727 MTSS1LQ765P7 747 aa12.5□□□□□ -0.41
CHMP3-204ENST00000409727 Q7L0L9 218 aa12.5□□□□□ -0.41
CHMP3-204ENST00000409727 NLRP9Q7RTR0 991 aa12.5□□□□□ -0.41
CHMP3-204ENST00000409727 LDB1Q86U70 411 aaPredicted RBP12.5□□□□□ -0.41
CHMP3-204ENST00000409727 TERB1Q8NA31 727 aa12.5□□□□□ -0.41
CHMP3-204ENST00000409727 OR4K2Q8NGD2 314 aa12.5□□□□□ -0.41
CHMP3-204ENST00000409727 SUSD6Q92537 303 aa12.5□□□□□ -0.41
CHMP3-204ENST00000409727 CHFRQ96EP1 664 aa12.5□□□□□ -0.41
CHMP3-204ENST00000409727 CAPS2Q9BXY5 557 aa12.5□□□□□ -0.41
CHMP3-204ENST00000409727 POLR3BQ9NW08 1133 aaPredicted RBP12.5□□□□□ -0.41
CHMP3-204ENST00000409727 BRWD1Q9NSI6 2320 aa12.49□□□□□ -0.41
CHMP3-204ENST00000409727 HTRA2O43464 458 aaPredicted RBP12.49□□□□□ -0.41
CHMP3-204ENST00000409727 SOCS5O75159 536 aa12.49□□□□□ -0.41
CHMP3-204ENST00000409727 PAPSS2O95340 614 aaPredicted RBP12.49□□□□□ -0.41
CHMP3-204ENST00000409727 ASLP04424 464 aa12.49□□□□□ -0.41
CHMP3-204ENST00000409727 SRPRAP08240 638 aaKnown RBP12.49□□□□□ -0.41
CHMP3-204ENST00000409727 ITGA2BP08514 1039 aa12.49□□□□□ -0.41
CHMP3-204ENST00000409727 SAT1P21673 171 aa12.49□□□□□ -0.41
CHMP3-204ENST00000409727 ZNF140P52738 457 aaPredicted RBP12.49□□□□□ -0.41
CHMP3-204ENST00000409727 GNGT1P63211 74 aa12.49□□□□□ -0.41
CHMP3-204ENST00000409727 PDE1BQ01064 536 aa12.49□□□□□ -0.41
CHMP3-204ENST00000409727 HTR4Q13639 388 aa12.49□□□□□ -0.41
CHMP3-204ENST00000409727 LAMB3Q13751 1172 aa12.49□□□□□ -0.41
CHMP3-204ENST00000409727 AAK1Q2M2I8 961 aa12.49□□□□□ -0.41
CHMP3-204ENST00000409727 ITPRIPL2Q3MIP1 535 aa12.49□□□□□ -0.41
CHMP3-204ENST00000409727 LYSMD3Q7Z3D4 306 aa12.49□□□□□ -0.41
CHMP3-204ENST00000409727 VOPP1Q96AW1 172 aa12.49□□□□□ -0.41
CHMP3-204ENST00000409727 KLHL32Q96NJ5 620 aa12.49□□□□□ -0.41
CHMP3-204ENST00000409727 TUBGCP5Q96RT8 1024 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms