RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.45□□□□□ -0.58
SNX13-202ENST00000409604 GYG2O15488 501 aa11.45□□□□□ -0.58
SNX13-202ENST00000409604 CLDN7O95471 211 aa11.45□□□□□ -0.58
SNX13-202ENST00000409604 TOP3BO95985 862 aaKnown RBP11.45□□□□□ -0.58
SNX13-202ENST00000409604 EIF2S1P05198 315 aaKnown RBP11.45□□□□□ -0.58
SNX13-202ENST00000409604 MAGEA11P43364 429 aa11.45□□□□□ -0.58
SNX13-202ENST00000409604 CUL3Q13618 768 aa11.45□□□□□ -0.58
SNX13-202ENST00000409604 CHST15Q7LFX5 561 aaPredicted RBP11.45□□□□□ -0.58
SNX13-202ENST00000409604 SPPL3Q8TCT6 385 aa11.45□□□□□ -0.58
SNX13-202ENST00000409604 ZNF398Q8TD17 642 aa11.45□□□□□ -0.58
SNX13-202ENST00000409604 ZNF778Q96MU6 729 aa11.45□□□□□ -0.58
SNX13-202ENST00000409604 SLC17A7Q9P2U7 560 aa11.45□□□□□ -0.58
SNX13-202ENST00000409604 GGA2Q9UJY4 613 aa11.45□□□□□ -0.58
SNX13-202ENST00000409604 LRRC37AA6NMS7 1700 aa11.45□□□□□ -0.58
SNX13-202ENST00000409604 BDP1A6H8Y1 2624 aa11.45□□□□□ -0.58
SNX13-202ENST00000409604 NDST3O95803 873 aa11.45□□□□□ -0.58
SNX13-202ENST00000409604 ITGA2BP08514 1039 aa11.45□□□□□ -0.58
SNX13-202ENST00000409604 SERPINB5P36952 375 aa11.45□□□□□ -0.58
SNX13-202ENST00000409604 ENPEPQ07075 957 aa11.45□□□□□ -0.58
SNX13-202ENST00000409604 LMAN2Q12907 356 aa11.45□□□□□ -0.58
SNX13-202ENST00000409604 TRIM71Q2Q1W2 868 aaKnown RBP11.45□□□□□ -0.58
SNX13-202ENST00000409604 CCSAPQ6IQ19 270 aaPredicted RBP11.45□□□□□ -0.58
SNX13-202ENST00000409604 LYSMD3Q7Z3D4 306 aa11.45□□□□□ -0.58
SNX13-202ENST00000409604 CCNJLQ8IV13 435 aa11.45□□□□□ -0.58
SNX13-202ENST00000409604 OR10G6Q8NH81 332 aa11.45□□□□□ -0.58
SNX13-202ENST00000409604 UBE2Q2Q8WVN8 375 aa11.45□□□□□ -0.58
SNX13-202ENST00000409604 SPOCK2Q92563 424 aa11.45□□□□□ -0.58
SNX13-202ENST00000409604 SCAMP4Q969E2 229 aa11.45□□□□□ -0.58
SNX13-202ENST00000409604 CAVIN3Q969G5 261 aa11.45□□□□□ -0.58
SNX13-202ENST00000409604 COPS8Q99627 209 aa11.45□□□□□ -0.58
SNX13-202ENST00000409604 GRHL1Q9NZI5 618 aa11.45□□□□□ -0.58
SNX13-202ENST00000409604 GULP1Q9UBP9 304 aa11.45□□□□□ -0.58
SNX13-202ENST00000409604 PHTF1Q9UMS5 762 aa11.45□□□□□ -0.58
SNX13-202ENST00000409604 KIAA1217Q5T5P2 1943 aa11.45□□□□□ -0.58
SNX13-202ENST00000409604 BCLAF3A2AJT9 711 aaKnown RBP11.45□□□□□ -0.58
SNX13-202ENST00000409604 EIF4E1BA6NMX2 242 aaKnown RBP11.45□□□□□ -0.58
SNX13-202ENST00000409604 CDH5P33151 784 aaPredicted RBP11.45□□□□□ -0.58
SNX13-202ENST00000409604 AQP5P55064 265 aa11.45□□□□□ -0.58
SNX13-202ENST00000409604 LPAL2Q16609 132 aa11.45□□□□□ -0.58
SNX13-202ENST00000409604 DNAJC14Q6Y2X3 702 aaPredicted RBP11.45□□□□□ -0.58
SNX13-202ENST00000409604 PPP1R16AQ96I34 528 aa11.45□□□□□ -0.58
SNX13-202ENST00000409604 SLC25A51Q9H1U9 297 aa11.45□□□□□ -0.58
SNX13-202ENST00000409604 GBA3Q9H227 469 aa11.45□□□□□ -0.58
SNX13-202ENST00000409604 MTO1Q9Y2Z2 717 aaKnown RBP11.45□□□□□ -0.58
SNX13-202ENST00000409604 MAGEB16A2A368 324 aa11.44□□□□□ -0.58
SNX13-202ENST00000409604 IFRD1O00458 451 aaPredicted RBP11.44□□□□□ -0.58
SNX13-202ENST00000409604 AP2A1O95782 977 aa11.44□□□□□ -0.58
SNX13-202ENST00000409604 CYP2A6P11509 494 aaPredicted RBP11.44□□□□□ -0.58
SNX13-202ENST00000409604 RASSF2P50749 326 aa11.44□□□□□ -0.58
SNX13-202ENST00000409604 SPANXN3Q5MJ09 141 aa11.44□□□□□ -0.58
SNX13-202ENST00000409604 ARMC6Q6NXE6 501 aa11.44□□□□□ -0.58
SNX13-202ENST00000409604 NIPA2Q8N8Q9 360 aa11.44□□□□□ -0.58
SNX13-202ENST00000409604 ZNF473Q8WTR7 871 aaKnown RBP11.44□□□□□ -0.58
SNX13-202ENST00000409604 PRKD2Q9BZL6 878 aa11.44□□□□□ -0.58
SNX13-202ENST00000409604 ATG10Q9H0Y0 220 aa11.44□□□□□ -0.58
SNX13-202ENST00000409604 KCND1Q9NSA2 647 aa11.44□□□□□ -0.58
SNX13-202ENST00000409604 ARMCX1Q9P291 453 aa11.44□□□□□ -0.58
SNX13-202ENST00000409604 MMP20O60882 483 aa11.44□□□□□ -0.58
SNX13-202ENST00000409604 PAK4O96013 591 aaPredicted RBP11.44□□□□□ -0.58
SNX13-202ENST00000409604 SERPINB3P29508 390 aa11.44□□□□□ -0.58
SNX13-202ENST00000409604 GABRB2P47870 512 aa11.44□□□□□ -0.58
SNX13-202ENST00000409604 SERPINB4P48594 390 aa11.44□□□□□ -0.58
SNX13-202ENST00000409604 PDGFRLQ15198 375 aa11.44□□□□□ -0.58
SNX13-202ENST00000409604 CRY1Q16526 586 aa11.44□□□□□ -0.58
SNX13-202ENST00000409604 PLEKHG6Q3KR16 790 aa11.44□□□□□ -0.58
SNX13-202ENST00000409604 DPY19L3Q6ZPD9 716 aa11.44□□□□□ -0.58
SNX13-202ENST00000409604 SRLQ86TD4 932 aa11.44□□□□□ -0.58
SNX13-202ENST00000409604 NTAN1Q96AB6 310 aa11.44□□□□□ -0.58
SNX13-202ENST00000409604 SGSM3Q96HU1 749 aa11.44□□□□□ -0.58
SNX13-202ENST00000409604 MAGED4Q96JG8 741 aa11.44□□□□□ -0.58
SNX13-202ENST00000409604 HEPHQ9BQS7 1158 aa11.44□□□□□ -0.58
SNX13-202ENST00000409604 NUF2Q9BZD4 464 aa11.44□□□□□ -0.58
SNX13-202ENST00000409604 TPSD1Q9BZJ3 242 aa11.44□□□□□ -0.58
SNX13-202ENST00000409604 NMRAL1Q9HBL8 299 aa11.44□□□□□ -0.58
SNX13-202ENST00000409604 BACE2Q9Y5Z0 518 aa11.44□□□□□ -0.58
SNX13-202ENST00000409604 ALOX15BO15296 676 aa11.44□□□□□ -0.58
SNX13-202ENST00000409604 GLRA3O75311 464 aa11.44□□□□□ -0.58
SNX13-202ENST00000409604 CYP11A1P05108 521 aa11.44□□□□□ -0.58
SNX13-202ENST00000409604 CTSOP43234 321 aaPredicted RBP11.44□□□□□ -0.58
SNX13-202ENST00000409604 ZNF135P52742 658 aaPredicted RBP11.44□□□□□ -0.58
SNX13-202ENST00000409604 FSCBQ5H9T9 825 aa11.44□□□□□ -0.58
SNX13-202ENST00000409604 GAREM2Q75VX8 874 aa11.44□□□□□ -0.58
SNX13-202ENST00000409604 STK40Q8N2I9 435 aa11.44□□□□□ -0.58
SNX13-202ENST00000409604 MIER2Q8N344 545 aa11.44□□□□□ -0.58
SNX13-202ENST00000409604 RNF148Q8N7C7 305 aa11.44□□□□□ -0.58
SNX13-202ENST00000409604 FAXDC2Q96IV6 333 aa11.44□□□□□ -0.58
SNX13-202ENST00000409604 FAM186AA6NE01 2351 aa11.43□□□□□ -0.58
SNX13-202ENST00000409604 CEP250Q9BV73 2442 aa11.43□□□□□ -0.58
SNX13-202ENST00000409604 ARHGAP10A1A4S6 786 aa11.43□□□□□ -0.58
SNX13-202ENST00000409604 TTC34A8MYJ7 566 aa11.43□□□□□ -0.58
SNX13-202ENST00000409604 SMAD6O43541 496 aaKnown RBP11.43□□□□□ -0.58
SNX13-202ENST00000409604 LYPLA1O75608 230 aaPredicted RBP11.43□□□□□ -0.58
SNX13-202ENST00000409604 APOA4P06727 396 aa11.43□□□□□ -0.58
SNX13-202ENST00000409604 IL10RBQ08334 325 aa11.43□□□□□ -0.58
SNX13-202ENST00000409604 GRSF1Q12849 480 aaKnown RBP eCLIP11.43□□□□□ -0.58
SNX13-202ENST00000409604 CAMK2GQ13555 558 aaPredicted RBP11.43□□□□□ -0.58
SNX13-202ENST00000409604 GRM3Q14832 879 aa11.43□□□□□ -0.58
SNX13-202ENST00000409604 ZNF542PQ5EBM4 170 aa11.43□□□□□ -0.58
SNX13-202ENST00000409604 AGBL2Q5U5Z8 902 aa11.43□□□□□ -0.58
SNX13-202ENST00000409604 PKN3Q6P5Z2 889 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 132.4 ms