RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 EIF2B5Q13144 721 aaKnown RBP14.62□□□□□ -0.07
NIF3L1-205ENST00000409588 TARDBPQ13148 414 aaKnown RBP eCLIP14.62□□□□□ -0.07
NIF3L1-205ENST00000409588 RTP5Q14D33 572 aa14.62□□□□□ -0.07
NIF3L1-205ENST00000409588 ELOCQ15369 112 aa14.62□□□□□ -0.07
NIF3L1-205ENST00000409588 ASTE1Q2TB18 679 aaPredicted RBP14.62□□□□□ -0.07
NIF3L1-205ENST00000409588 WSCD2Q2TBF2 565 aa14.62□□□□□ -0.07
NIF3L1-205ENST00000409588 FAXCQ5TGI0 409 aa14.62□□□□□ -0.07
NIF3L1-205ENST00000409588 HES3Q5TGS1 186 aa14.62□□□□□ -0.07
NIF3L1-205ENST00000409588 TIGD7Q6NT04 549 aaPredicted RBP14.62□□□□□ -0.07
NIF3L1-205ENST00000409588 VSIG1Q86XK7 387 aa14.62□□□□□ -0.07
NIF3L1-205ENST00000409588 RAVER1Q8IY67 606 aaKnown RBP14.62□□□□□ -0.07
NIF3L1-205ENST00000409588 DCBLD1Q8N8Z6 715 aa14.62□□□□□ -0.07
NIF3L1-205ENST00000409588 NETO2Q8NC67 525 aa14.62□□□□□ -0.07
NIF3L1-205ENST00000409588 KCTD6Q8NC69 237 aa14.62□□□□□ -0.07
NIF3L1-205ENST00000409588 MGME1Q9BQP7 344 aa14.62□□□□□ -0.07
NIF3L1-205ENST00000409588 ZNF670Q9BS34 389 aa14.62□□□□□ -0.07
NIF3L1-205ENST00000409588 APOOQ9BUR5 198 aa14.62□□□□□ -0.07
NIF3L1-205ENST00000409588 TSPY26PQ9H489 355 aa14.62□□□□□ -0.07
NIF3L1-205ENST00000409588 MBNL1Q9NR56 388 aaKnown RBP14.62□□□□□ -0.07
NIF3L1-205ENST00000409588 PLA2G2EQ9NZK7 142 aa14.62□□□□□ -0.07
NIF3L1-205ENST00000409588 FREM2Q5SZK8 3169 aa14.62□□□□□ -0.07
NIF3L1-205ENST00000409588 EME2A4GXA9 379 aaPredicted RBP14.61□□□□□ -0.07
NIF3L1-205ENST00000409588 TNFRSF10CO14798 259 aa14.61□□□□□ -0.07
NIF3L1-205ENST00000409588 RASGRP1O95267 797 aa14.61□□□□□ -0.07
NIF3L1-205ENST00000409588 PEX11BO96011 259 aa14.61□□□□□ -0.07
NIF3L1-205ENST00000409588 ANXA6P08133 673 aa14.61□□□□□ -0.07
NIF3L1-205ENST00000409588 TMEM253P0C7T8 217 aa14.61□□□□□ -0.07
NIF3L1-205ENST00000409588 ELFN1P0C7U0 828 aa14.61□□□□□ -0.07
NIF3L1-205ENST00000409588 ITIH2P19823 946 aa14.61□□□□□ -0.07
NIF3L1-205ENST00000409588 CR2P20023 1033 aa14.61□□□□□ -0.07
NIF3L1-205ENST00000409588 MX2P20592 715 aa14.61□□□□□ -0.07
NIF3L1-205ENST00000409588 CCNCP24863 283 aa14.61□□□□□ -0.07
NIF3L1-205ENST00000409588 TRIM23P36406 574 aa14.61□□□□□ -0.07
NIF3L1-205ENST00000409588 SSR1P43307 286 aaKnown RBP14.61□□□□□ -0.07
NIF3L1-205ENST00000409588 MMP13P45452 471 aa14.61□□□□□ -0.07
NIF3L1-205ENST00000409588 RGRP47804 291 aa14.61□□□□□ -0.07
NIF3L1-205ENST00000409588 ARSEP51690 589 aa14.61□□□□□ -0.07
NIF3L1-205ENST00000409588 HK3P52790 923 aa14.61□□□□□ -0.07
NIF3L1-205ENST00000409588 INSM1Q01101 510 aaPredicted RBP14.61□□□□□ -0.07
NIF3L1-205ENST00000409588 CYP4F3Q08477 520 aa14.61□□□□□ -0.07
NIF3L1-205ENST00000409588 INPP5AQ14642 412 aa14.61□□□□□ -0.07
NIF3L1-205ENST00000409588 PAFAH1B3Q15102 231 aaKnown RBP14.61□□□□□ -0.07
NIF3L1-205ENST00000409588 ZNF542PQ5EBM4 170 aa14.61□□□□□ -0.07
NIF3L1-205ENST00000409588 PRRT3Q5FWE3 981 aa14.61□□□□□ -0.07
NIF3L1-205ENST00000409588 ESRP1Q6NXG1 681 aaKnown RBP14.61□□□□□ -0.07
NIF3L1-205ENST00000409588 LIPIQ6XZB0 460 aa14.61□□□□□ -0.07
NIF3L1-205ENST00000409588 ARHGAP36Q6ZRI8 547 aa14.61□□□□□ -0.07
NIF3L1-205ENST00000409588 DPPA4Q7L190 304 aa14.61□□□□□ -0.07
NIF3L1-205ENST00000409588 PHACTR4Q8IZ21 702 aa14.61□□□□□ -0.07
NIF3L1-205ENST00000409588 TEX26Q8N6G2 289 aa14.61□□□□□ -0.07
NIF3L1-205ENST00000409588 OR6C4Q8NGE1 309 aa14.61□□□□□ -0.07
NIF3L1-205ENST00000409588 LMX1AQ8TE12 382 aa14.61□□□□□ -0.07
NIF3L1-205ENST00000409588 NAT6Q93015 286 aa14.61□□□□□ -0.07
NIF3L1-205ENST00000409588 CCDC42Q96M95 316 aa14.61□□□□□ -0.07
NIF3L1-205ENST00000409588 TSGA13Q96PP4 275 aa14.61□□□□□ -0.07
NIF3L1-205ENST00000409588 BOCQ9BWV1 1114 aa14.61□□□□□ -0.07
NIF3L1-205ENST00000409588 APOBEC3BQ9UH17 382 aaKnown RBP14.61□□□□□ -0.07
NIF3L1-205ENST00000409588 KLF15Q9UIH9 416 aa14.61□□□□□ -0.07
NIF3L1-205ENST00000409588 PPIL1Q9Y3C6 166 aa14.61□□□□□ -0.07
NIF3L1-205ENST00000409588 DGKBQ9Y6T7 804 aa14.61□□□□□ -0.07
NIF3L1-205ENST00000409588 WDFY3Q8IZQ1 3526 aa14.61□□□□□ -0.07
NIF3L1-205ENST00000409588 FAM149AA5PLN7 773 aa14.6□□□□□ -0.07
NIF3L1-205ENST00000409588 ZNF487B1APH4 448 aa14.6□□□□□ -0.07
NIF3L1-205ENST00000409588 PSMD11O00231 422 aa14.6□□□□□ -0.07
NIF3L1-205ENST00000409588 OPA1O60313 960 aa14.6□□□□□ -0.07
NIF3L1-205ENST00000409588 MT-CO3P00414 261 aa14.6□□□□□ -0.07
NIF3L1-205ENST00000409588 CYP2A6P11509 494 aaPredicted RBP14.6□□□□□ -0.07
NIF3L1-205ENST00000409588 CTSEP14091 401 aa14.6□□□□□ -0.07
NIF3L1-205ENST00000409588 TCF4P15884 667 aa14.6□□□□□ -0.07
NIF3L1-205ENST00000409588 NFATC4Q14934 902 aa14.6□□□□□ -0.07
NIF3L1-205ENST00000409588 IRF4Q15306 451 aa14.6□□□□□ -0.07
NIF3L1-205ENST00000409588 IFI16Q16666 785 aaKnown RBP14.6□□□□□ -0.07
NIF3L1-205ENST00000409588 ANKRD20A8PQ5CZ79 823 aa14.6□□□□□ -0.07
NIF3L1-205ENST00000409588 LRRC73Q5JTD7 316 aa14.6□□□□□ -0.07
NIF3L1-205ENST00000409588 CDCP2Q5VXM1 449 aa14.6□□□□□ -0.07
NIF3L1-205ENST00000409588 GKN2Q86XP6 184 aa14.6□□□□□ -0.07
NIF3L1-205ENST00000409588 CNGA4Q8IV77 575 aa14.6□□□□□ -0.07
NIF3L1-205ENST00000409588 VSTM4Q8IW00 320 aa14.6□□□□□ -0.07
NIF3L1-205ENST00000409588 RHOT2Q8IXI1 618 aa14.6□□□□□ -0.07
NIF3L1-205ENST00000409588 LSMEM2Q8N112 164 aa14.6□□□□□ -0.07
NIF3L1-205ENST00000409588 MDM1Q8TC05 714 aa14.6□□□□□ -0.07
NIF3L1-205ENST00000409588 PTCD2Q8WV60 388 aaKnown RBP14.6□□□□□ -0.07
NIF3L1-205ENST00000409588 SCRN2Q96FV2 425 aa14.6□□□□□ -0.07
NIF3L1-205ENST00000409588 BTBD6Q96KE9 485 aa14.6□□□□□ -0.07
NIF3L1-205ENST00000409588 DEPDC7Q96QD5 511 aa14.6□□□□□ -0.07
NIF3L1-205ENST00000409588 ETNK2Q9NVF9 386 aa14.6□□□□□ -0.07
NIF3L1-205ENST00000409588 INTUQ9ULD6 942 aa14.6□□□□□ -0.07
NIF3L1-205ENST00000409588 CHD6Q8TD26 2715 aa14.59□□□□□ -0.07
NIF3L1-205ENST00000409588 CACNB4O00305 520 aaPredicted RBP14.59□□□□□ -0.07
NIF3L1-205ENST00000409588 MUSKO15146 869 aa14.59□□□□□ -0.07
NIF3L1-205ENST00000409588 MATN3O15232 486 aa14.59□□□□□ -0.07
NIF3L1-205ENST00000409588 RECQL5O94762 991 aaPredicted RBP14.59□□□□□ -0.07
NIF3L1-205ENST00000409588 TNFP01375 233 aa14.59□□□□□ -0.07
NIF3L1-205ENST00000409588 CA4P22748 312 aa14.59□□□□□ -0.07
NIF3L1-205ENST00000409588 GARSP41250 739 aaKnown RBP14.59□□□□□ -0.07
NIF3L1-205ENST00000409588 ADKP55263 362 aaKnown RBP14.59□□□□□ -0.07
NIF3L1-205ENST00000409588 KIAA1024LP59773 190 aa14.59□□□□□ -0.07
NIF3L1-205ENST00000409588 SRP54P61011 504 aaKnown RBP14.59□□□□□ -0.07
NIF3L1-205ENST00000409588 GALNT2Q10471 571 aa14.59□□□□□ -0.07
NIF3L1-205ENST00000409588 DPYSL3Q14195 570 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms