RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 CSHL1Q14406 222 aa20.78■□□□□ 0.92
USP39-203ENST00000409470 GLT6D1Q7Z4J2 308 aa20.78■□□□□ 0.92
USP39-203ENST00000409470 TMC8Q8IU68 726 aa20.78■□□□□ 0.92
USP39-203ENST00000409470 KREMEN2Q8NCW0 462 aa20.78■□□□□ 0.92
USP39-203ENST00000409470 LPCAT1Q8NF37 534 aa20.78■□□□□ 0.92
USP39-203ENST00000409470 DDI1Q8WTU0 396 aa20.78■□□□□ 0.92
USP39-203ENST00000409470 HEXDCQ8WVB3 486 aa20.78■□□□□ 0.92
USP39-203ENST00000409470 GCNAQ96QF7 691 aa20.78■□□□□ 0.92
USP39-203ENST00000409470 TMEM106CQ9BVX2 250 aa20.78■□□□□ 0.92
USP39-203ENST00000409470 CFAP97Q9P2B7 532 aa20.78■□□□□ 0.92
USP39-203ENST00000409470 RIMKLBQ9ULI2 386 aa20.78■□□□□ 0.92
USP39-203ENST00000409470 VWA7Q9Y334 891 aa20.78■□□□□ 0.92
USP39-203ENST00000409470 INSL6Q9Y581 213 aa20.78■□□□□ 0.92
USP39-203ENST00000409470 SPO11Q9Y5K1 396 aa20.78■□□□□ 0.92
USP39-203ENST00000409470 ZMPSTE24O75844 475 aa20.78■□□□□ 0.92
USP39-203ENST00000409470 CD160O95971 181 aa20.78■□□□□ 0.92
USP39-203ENST00000409470 LINC00271P0C7V0 271 aa20.78■□□□□ 0.92
USP39-203ENST00000409470 PTPN4P29074 926 aa20.78■□□□□ 0.92
USP39-203ENST00000409470 ALDH18A1P54886 795 aaKnown RBP20.78■□□□□ 0.92
USP39-203ENST00000409470 NSUN2Q08J23 767 aaKnown RBP eCLIP20.78■□□□□ 0.92
USP39-203ENST00000409470 SNCBQ16143 134 aa20.78■□□□□ 0.92
USP39-203ENST00000409470 FAM83EQ2M2I3 478 aa20.78■□□□□ 0.92
USP39-203ENST00000409470 LILRA6Q6PI73 481 aa20.78■□□□□ 0.92
USP39-203ENST00000409470 MFN1Q8IWA4 741 aa20.78■□□□□ 0.92
USP39-203ENST00000409470 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.78■□□□□ 0.92
USP39-203ENST00000409470 PDCD6IPQ8WUM4 868 aaKnown RBP20.78■□□□□ 0.92
USP39-203ENST00000409470 SCG3Q8WXD2 468 aaKnown RBP20.78■□□□□ 0.92
USP39-203ENST00000409470 PTCD3Q96EY7 689 aaKnown RBP20.78■□□□□ 0.92
USP39-203ENST00000409470 MRPL46Q9H2W6 279 aaKnown RBP20.78■□□□□ 0.92
USP39-203ENST00000409470 GPAMQ9HCL2 828 aa20.78■□□□□ 0.92
USP39-203ENST00000409470 CATSPERZQ9NTU4 200 aa20.78■□□□□ 0.92
USP39-203ENST00000409470 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.78■□□□□ 0.92
USP39-203ENST00000409470 APOBEC2Q9Y235 224 aaKnown RBP20.78■□□□□ 0.92
USP39-203ENST00000409470 CRYL1Q9Y2S2 319 aa20.78■□□□□ 0.92
USP39-203ENST00000409470 TRAV19A0A0A6YYK7 116 aa20.77■□□□□ 0.92
USP39-203ENST00000409470 A0A1W2PRU2 124 aa20.77■□□□□ 0.92
USP39-203ENST00000409470 PDHA1P08559 390 aa20.77■□□□□ 0.92
USP39-203ENST00000409470 ESRRAP11474 423 aaPredicted RBP20.77■□□□□ 0.92
USP39-203ENST00000409470 MYL4P12829 197 aa20.77■□□□□ 0.92
USP39-203ENST00000409470 GJA1P17302 382 aa20.77■□□□□ 0.92
USP39-203ENST00000409470 CALB2P22676 271 aa20.77■□□□□ 0.92
USP39-203ENST00000409470 GRIA4P48058 902 aa20.77■□□□□ 0.92
USP39-203ENST00000409470 FAM91A1Q658Y4 838 aa20.77■□□□□ 0.92
USP39-203ENST00000409470 ZNF781Q8N8C0 355 aa20.77■□□□□ 0.92
USP39-203ENST00000409470 OR4L1Q8NH43 312 aa20.77■□□□□ 0.92
USP39-203ENST00000409470 TCF25Q9BQ70 676 aa20.77■□□□□ 0.92
USP39-203ENST00000409470 MRPL57Q9BQC6 102 aaKnown RBP20.77■□□□□ 0.92
USP39-203ENST00000409470 ADGRE3Q9BY15 652 aa20.77■□□□□ 0.92
USP39-203ENST00000409470 LRRC3Q9BY71 257 aa20.77■□□□□ 0.92
USP39-203ENST00000409470 VPS51Q9UID3 782 aa20.77■□□□□ 0.92
USP39-203ENST00000409470 TARM1B6A8C7 271 aa20.77■□□□□ 0.91
USP39-203ENST00000409470 GFRA2O00451 464 aa20.77■□□□□ 0.91
USP39-203ENST00000409470 TRAFD1O14545 582 aaPredicted RBP20.77■□□□□ 0.91
USP39-203ENST00000409470 PRLP01236 227 aa20.77■□□□□ 0.91
USP39-203ENST00000409470 SLC4A1P02730 911 aa20.77■□□□□ 0.91
USP39-203ENST00000409470 RHOAP61586 193 aa20.77■□□□□ 0.91
USP39-203ENST00000409470 PPIGQ13427 754 aaKnown RBP eCLIP20.77■□□□□ 0.914e-7■■□□□ 13.9
USP39-203ENST00000409470 TAF1AQ15573 450 aaPredicted RBP20.77■□□□□ 0.91
USP39-203ENST00000409470 INO80DQ53TQ3 878 aaPredicted RBP20.77■□□□□ 0.91
USP39-203ENST00000409470 CFAP157Q5JU67 520 aa20.77■□□□□ 0.91
USP39-203ENST00000409470 AGAP9Q5VTM2 703 aa20.77■□□□□ 0.91
USP39-203ENST00000409470 SDCCAG8Q86SQ7 713 aaPredicted RBP20.77■□□□□ 0.91
USP39-203ENST00000409470 TDRD5Q8NAT2 981 aaKnown RBP20.77■□□□□ 0.91
USP39-203ENST00000409470 GPR150Q8NGU9 434 aa20.77■□□□□ 0.91
USP39-203ENST00000409470 WFDC5Q8TCV5 224 aa20.77■□□□□ 0.91
USP39-203ENST00000409470 CLP1Q92989 425 aaKnown RBP20.77■□□□□ 0.91
USP39-203ENST00000409470 CDKN2AIPNLQ96HQ2 116 aa20.77■□□□□ 0.91
USP39-203ENST00000409470 CORO1BQ9BR76 489 aa20.77■□□□□ 0.91
USP39-203ENST00000409470 TBC1D10AQ9BXI6 508 aa20.77■□□□□ 0.91
USP39-203ENST00000409470 EMILIN2Q9BXX0 1053 aa20.77■□□□□ 0.91
USP39-203ENST00000409470 IGSF5Q9NSI5 407 aa20.77■□□□□ 0.91
USP39-203ENST00000409470 NLE1Q9NVX2 485 aaPredicted RBP20.77■□□□□ 0.91
USP39-203ENST00000409470 DNAJC28Q9NX36 388 aa20.77■□□□□ 0.91
USP39-203ENST00000409470 ZNF510Q9Y2H8 683 aa20.77■□□□□ 0.91
USP39-203ENST00000409470 C2orf81A6NN90 581 aa20.76■□□□□ 0.91
USP39-203ENST00000409470 DLX3O60479 287 aa20.76■□□□□ 0.91
USP39-203ENST00000409470 SERPINA6P08185 405 aa20.76■□□□□ 0.91
USP39-203ENST00000409470 PMLP29590 882 aa20.76■□□□□ 0.91
USP39-203ENST00000409470 CDC25CP30307 473 aa20.76■□□□□ 0.91
USP39-203ENST00000409470 ZNF140P52738 457 aaPredicted RBP20.76■□□□□ 0.91
USP39-203ENST00000409470 NAGLUP54802 743 aa20.76■□□□□ 0.91
USP39-203ENST00000409470 SLC7A9P82251 487 aa20.76■□□□□ 0.91
USP39-203ENST00000409470 ASPHQ12797 758 aa20.76■□□□□ 0.91
USP39-203ENST00000409470 USP4Q13107 963 aa20.76■□□□□ 0.91
USP39-203ENST00000409470 KLC3Q6P597 504 aa20.76■□□□□ 0.91
USP39-203ENST00000409470 MAVSQ7Z434 540 aa20.76■□□□□ 0.91
USP39-203ENST00000409470 FAM217AQ8IXS0 508 aa20.76■□□□□ 0.91
USP39-203ENST00000409470 SGF29Q96ES7 293 aa20.76■□□□□ 0.91
USP39-203ENST00000409470 CDH19Q9H159 772 aa20.76■□□□□ 0.91
USP39-203ENST00000409470 ACSS2Q9NR19 701 aa20.76■□□□□ 0.91
USP39-203ENST00000409470 LHX3Q9UBR4 397 aa20.76■□□□□ 0.91
USP39-203ENST00000409470 PRKAG2Q9UGJ0 569 aa20.76■□□□□ 0.91
USP39-203ENST00000409470 BAIAP2L1Q9UHR4 511 aa20.76■□□□□ 0.91
USP39-203ENST00000409470 FCF1Q9Y324 198 aaKnown RBP20.76■□□□□ 0.91
USP39-203ENST00000409470 OR51B4Q9Y5P0 310 aa20.76■□□□□ 0.91
USP39-203ENST00000409470 ATP6V1G2O95670 118 aa20.75■□□□□ 0.91
USP39-203ENST00000409470 LTA4HP09960 611 aaKnown RBP20.75■□□□□ 0.91
USP39-203ENST00000409470 CCDC166P0CW27 439 aa20.75■□□□□ 0.91
USP39-203ENST00000409470 IDH3AP50213 366 aa20.75■□□□□ 0.91
USP39-203ENST00000409470 CDKN2DP55273 166 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms