RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 GRM2Q14416 872 aa14.12□□□□□ -0.15
GPNMB-203ENST00000409458 PDGFRLQ15198 375 aa14.12□□□□□ -0.15
GPNMB-203ENST00000409458 TAF1AQ15573 450 aaPredicted RBP14.12□□□□□ -0.15
GPNMB-203ENST00000409458 DLG2Q15700 870 aa14.12□□□□□ -0.15
GPNMB-203ENST00000409458 ACCSLQ4AC99 568 aa14.12□□□□□ -0.15
GPNMB-203ENST00000409458 FSTL4Q6MZW2 842 aa14.12□□□□□ -0.15
GPNMB-203ENST00000409458 NEPROQ6NW34 567 aa14.12□□□□□ -0.15
GPNMB-203ENST00000409458 Q6ZVU0 165 aa14.12□□□□□ -0.15
GPNMB-203ENST00000409458 C2CD4AQ8NCU7 369 aaPredicted RBP14.12□□□□□ -0.15
GPNMB-203ENST00000409458 ACVR1CQ8NER5 493 aa14.12□□□□□ -0.15
GPNMB-203ENST00000409458 TCP10LQ8TDR4 215 aa14.12□□□□□ -0.15
GPNMB-203ENST00000409458 STYXQ8WUJ0 223 aa14.12□□□□□ -0.15
GPNMB-203ENST00000409458 DYDC1Q8WWB3 177 aa14.12□□□□□ -0.15
GPNMB-203ENST00000409458 PIH1D2Q8WWB5 315 aa14.12□□□□□ -0.15
GPNMB-203ENST00000409458 PTPRN2Q92932 1015 aa14.12□□□□□ -0.15
GPNMB-203ENST00000409458 PEX13Q92968 403 aa14.12□□□□□ -0.15
GPNMB-203ENST00000409458 VPS39Q96JC1 886 aa14.12□□□□□ -0.15
GPNMB-203ENST00000409458 KXD1Q9BQD3 176 aa14.12□□□□□ -0.15
GPNMB-203ENST00000409458 MFSD1Q9H3U5 465 aa14.12□□□□□ -0.15
GPNMB-203ENST00000409458 POMKQ9H5K3 350 aa14.12□□□□□ -0.15
GPNMB-203ENST00000409458 RABEP2Q9H5N1 569 aa14.12□□□□□ -0.15
GPNMB-203ENST00000409458 ATP13A3Q9H7F0 1226 aa14.12□□□□□ -0.15
GPNMB-203ENST00000409458 ECT2Q9H8V3 914 aa14.12□□□□□ -0.15
GPNMB-203ENST00000409458 THG1LQ9NWX6 298 aaKnown RBP14.12□□□□□ -0.15
GPNMB-203ENST00000409458 SLC17A7Q9P2U7 560 aa14.12□□□□□ -0.15
GPNMB-203ENST00000409458 RIMKLBQ9ULI2 386 aa14.12□□□□□ -0.15
GPNMB-203ENST00000409458 MTO1Q9Y2Z2 717 aaKnown RBP14.12□□□□□ -0.15
GPNMB-203ENST00000409458 MTCH2Q9Y6C9 303 aa14.12□□□□□ -0.15
GPNMB-203ENST00000409458 A0A0U1RQS6 177 aa14.11□□□□□ -0.15
GPNMB-203ENST00000409458 SLC7A4O43246 635 aa14.11□□□□□ -0.15
GPNMB-203ENST00000409458 RPP40O75818 363 aaKnown RBP14.11□□□□□ -0.15
GPNMB-203ENST00000409458 ZWINTO95229 277 aa14.11□□□□□ -0.15
GPNMB-203ENST00000409458 ASMTLO95671 621 aa14.11□□□□□ -0.15
GPNMB-203ENST00000409458 CTPS1P17812 591 aa14.11□□□□□ -0.15
GPNMB-203ENST00000409458 LTBRP36941 435 aa14.11□□□□□ -0.15
GPNMB-203ENST00000409458 ABL2P42684 1182 aa14.11□□□□□ -0.15
GPNMB-203ENST00000409458 MAGEA12P43365 314 aa14.11□□□□□ -0.15
GPNMB-203ENST00000409458 SEC24CP53992 1094 aa14.11□□□□□ -0.15
GPNMB-203ENST00000409458 EPHB1P54762 984 aa14.11□□□□□ -0.15
GPNMB-203ENST00000409458 PRAMEP78395 509 aa14.11□□□□□ -0.15
GPNMB-203ENST00000409458 DNAJC3Q13217 504 aa14.11□□□□□ -0.15
GPNMB-203ENST00000409458 GRIN2CQ14957 1233 aa14.11□□□□□ -0.15
GPNMB-203ENST00000409458 MYLK3Q32MK0 819 aa14.11□□□□□ -0.15
GPNMB-203ENST00000409458 CARD16Q5EG05 197 aa14.11□□□□□ -0.15
GPNMB-203ENST00000409458 DPY19L3Q6ZPD9 716 aa14.11□□□□□ -0.15
GPNMB-203ENST00000409458 CDHR3Q6ZTQ4 885 aa14.11□□□□□ -0.15
GPNMB-203ENST00000409458 PTAR1Q7Z6K3 402 aaPredicted RBP14.11□□□□□ -0.15
GPNMB-203ENST00000409458 ZC3HC1Q86WB0 502 aaKnown RBP14.11□□□□□ -0.15
GPNMB-203ENST00000409458 ZSWIM9Q86XI8 627 aa14.11□□□□□ -0.15
GPNMB-203ENST00000409458 MFSD6LQ8IWD5 586 aa14.11□□□□□ -0.15
GPNMB-203ENST00000409458 WFIKKN2Q8TEU8 576 aa14.11□□□□□ -0.15
GPNMB-203ENST00000409458 NXPE3Q969Y0 559 aa14.11□□□□□ -0.15
GPNMB-203ENST00000409458 ISL2Q96A47 359 aa14.11□□□□□ -0.15
GPNMB-203ENST00000409458 TBATAQ96M53 351 aa14.11□□□□□ -0.15
GPNMB-203ENST00000409458 CIPCQ9C0C6 399 aa14.11□□□□□ -0.15
GPNMB-203ENST00000409458 RHOJQ9H4E5 214 aa14.11□□□□□ -0.15
GPNMB-203ENST00000409458 SUDS3Q9H7L9 328 aaPredicted RBP14.11□□□□□ -0.15
GPNMB-203ENST00000409458 POLR3BQ9NW08 1133 aaPredicted RBP14.11□□□□□ -0.15
GPNMB-203ENST00000409458 MKS1Q9NXB0 559 aa14.11□□□□□ -0.15
GPNMB-203ENST00000409458 GRID1Q9ULK0 1009 aa14.11□□□□□ -0.15
GPNMB-203ENST00000409458 SLC27A6Q9Y2P4 619 aa14.11□□□□□ -0.15
GPNMB-203ENST00000409458 XIRP2A4UGR9 3374 aa14.11□□□□□ -0.15
GPNMB-203ENST00000409458 SPTBN5Q9NRC6 3674 aaKnown RBP14.11□□□□□ -0.15
GPNMB-203ENST00000409458 CCDC162PA2VCL2 907 aa14.1□□□□□ -0.15
GPNMB-203ENST00000409458 TTC34A8MYJ7 566 aa14.1□□□□□ -0.15
GPNMB-203ENST00000409458 COPEO14579 308 aa14.1□□□□□ -0.15
GPNMB-203ENST00000409458 TM9SF1O15321 606 aa14.1□□□□□ -0.15
GPNMB-203ENST00000409458 TIMM44O43615 452 aa14.1□□□□□ -0.15
GPNMB-203ENST00000409458 TOP3BO95985 862 aaKnown RBP14.1□□□□□ -0.15
GPNMB-203ENST00000409458 GOT2P00505 430 aaKnown RBP14.1□□□□□ -0.15
GPNMB-203ENST00000409458 AHSGP02765 367 aa14.1□□□□□ -0.15
GPNMB-203ENST00000409458 ALPIP09923 528 aa14.1□□□□□ -0.15
GPNMB-203ENST00000409458 SERPINA4P29622 427 aa14.1□□□□□ -0.15
GPNMB-203ENST00000409458 SERPINB8P50452 374 aa14.1□□□□□ -0.15
GPNMB-203ENST00000409458 PDE1BQ01064 536 aa14.1□□□□□ -0.15
GPNMB-203ENST00000409458 KDSRQ06136 332 aa14.1□□□□□ -0.15
GPNMB-203ENST00000409458 ADGRE1Q14246 886 aa14.1□□□□□ -0.15
GPNMB-203ENST00000409458 GRM3Q14832 879 aa14.1□□□□□ -0.15
GPNMB-203ENST00000409458 PTPRNQ16849 979 aa14.1□□□□□ -0.15
GPNMB-203ENST00000409458 PARM1Q6UWI2 310 aa14.1□□□□□ -0.15
GPNMB-203ENST00000409458 CMC1Q7Z7K0 106 aa14.1□□□□□ -0.15
GPNMB-203ENST00000409458 TAX1BP1Q86VP1 789 aa14.1□□□□□ -0.15
GPNMB-203ENST00000409458 NDUFAF2Q8N183 169 aa14.1□□□□□ -0.15
GPNMB-203ENST00000409458 TTC30BQ8N4P2 665 aa14.1□□□□□ -0.15
GPNMB-203ENST00000409458 OTUD6BQ8N6M0 293 aa14.1□□□□□ -0.15
GPNMB-203ENST00000409458 PNPLA1Q8N8W4 532 aa14.1□□□□□ -0.15
GPNMB-203ENST00000409458 CHST14Q8NCH0 376 aa14.1□□□□□ -0.15
GPNMB-203ENST00000409458 OR4K2Q8NGD2 314 aa14.1□□□□□ -0.15
GPNMB-203ENST00000409458 OR6P1Q8NGX9 317 aa14.1□□□□□ -0.15
GPNMB-203ENST00000409458 TTC8Q8TAM2 541 aa14.1□□□□□ -0.15
GPNMB-203ENST00000409458 FRS2Q8WU20 508 aa14.1□□□□□ -0.15
GPNMB-203ENST00000409458 FGF14Q92915 247 aa14.1□□□□□ -0.15
GPNMB-203ENST00000409458 E2F7Q96AV8 911 aa14.1□□□□□ -0.15
GPNMB-203ENST00000409458 MSLNLQ96KJ4 702 aa14.1□□□□□ -0.15
GPNMB-203ENST00000409458 RIPOR3Q96MK2 946 aa14.1□□□□□ -0.15
GPNMB-203ENST00000409458 TUBGCP5Q96RT8 1024 aa14.1□□□□□ -0.15
GPNMB-203ENST00000409458 SRPK1Q96SB4 655 aaKnown RBP14.1□□□□□ -0.15
GPNMB-203ENST00000409458 PAIP2Q9BPZ3 127 aaKnown RBP14.1□□□□□ -0.15
GPNMB-203ENST00000409458 EPN3Q9H201 632 aa14.1□□□□□ -0.15
GPNMB-203ENST00000409458 CCDC134Q9H6E4 229 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms