RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 HIF1AQ16665 826 aa13.09□□□□□ -0.31
LIMS2-203ENST00000409254 QPCTQ16769 361 aa13.09□□□□□ -0.31
LIMS2-203ENST00000409254 MAP7D1Q3KQU3 841 aa13.09□□□□□ -0.31
LIMS2-203ENST00000409254 SIRPB2Q5JXA9 342 aa13.09□□□□□ -0.31
LIMS2-203ENST00000409254 PIP5KL1Q5T9C9 394 aa13.09□□□□□ -0.31
LIMS2-203ENST00000409254 FAXCQ5TGI0 409 aa13.09□□□□□ -0.31
LIMS2-203ENST00000409254 ZDHHC20Q5W0Z9 365 aa13.09□□□□□ -0.31
LIMS2-203ENST00000409254 DENND5AQ6IQ26 1287 aa13.09□□□□□ -0.31
LIMS2-203ENST00000409254 FBXL19Q6PCT2 694 aa13.09□□□□□ -0.31
LIMS2-203ENST00000409254 DPPA4Q7L190 304 aa13.09□□□□□ -0.31
LIMS2-203ENST00000409254 RELL1Q8IUW5 271 aa13.09□□□□□ -0.31
LIMS2-203ENST00000409254 MDGA1Q8NFP4 955 aa13.09□□□□□ -0.31
LIMS2-203ENST00000409254 BRSK1Q8TDC3 778 aa13.09□□□□□ -0.31
LIMS2-203ENST00000409254 NSMCE3Q96MG7 304 aa13.09□□□□□ -0.31
LIMS2-203ENST00000409254 SERPINB12Q96P63 405 aa13.09□□□□□ -0.31
LIMS2-203ENST00000409254 FICDQ9BVA6 458 aa13.09□□□□□ -0.31
LIMS2-203ENST00000409254 MTG2Q9H4K7 406 aa13.09□□□□□ -0.31
LIMS2-203ENST00000409254 EPB41L5Q9HCM4 733 aa13.09□□□□□ -0.31
LIMS2-203ENST00000409254 ZDHHC4Q9NPG8 344 aa13.09□□□□□ -0.31
LIMS2-203ENST00000409254 ITM2CQ9NQX7 267 aa13.09□□□□□ -0.31
LIMS2-203ENST00000409254 RAD18Q9NS91 495 aa13.09□□□□□ -0.31
LIMS2-203ENST00000409254 UBP1Q9NZI7 540 aa13.09□□□□□ -0.31
LIMS2-203ENST00000409254 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.09□□□□□ -0.31
LIMS2-203ENST00000409254 BFARQ9NZS9 450 aa13.09□□□□□ -0.31
LIMS2-203ENST00000409254 CHKBQ9Y259 395 aa13.09□□□□□ -0.31
LIMS2-203ENST00000409254 GON4LQ3T8J9 2241 aa13.09□□□□□ -0.31
LIMS2-203ENST00000409254 ABCA7Q8IZY2 2146 aa13.09□□□□□ -0.31
LIMS2-203ENST00000409254 MAGEB16A2A368 324 aa13.08□□□□□ -0.32
LIMS2-203ENST00000409254 ANTXRLA6NF34 631 aa13.08□□□□□ -0.32
LIMS2-203ENST00000409254 LAMTOR5O43504 91 aa13.08□□□□□ -0.32
LIMS2-203ENST00000409254 GJB3O75712 270 aa13.08□□□□□ -0.32
LIMS2-203ENST00000409254 CRTAMO95727 393 aa13.08□□□□□ -0.32
LIMS2-203ENST00000409254 PDGFBP01127 241 aaPredicted RBP13.08□□□□□ -0.32
LIMS2-203ENST00000409254 PDHA1P08559 390 aa13.08□□□□□ -0.32
LIMS2-203ENST00000409254 TDGF1P13385 188 aa13.08□□□□□ -0.32
LIMS2-203ENST00000409254 VIPR1P32241 457 aa13.08□□□□□ -0.32
LIMS2-203ENST00000409254 PTPN5P54829 565 aa13.08□□□□□ -0.32
LIMS2-203ENST00000409254 ARL4CP56559 192 aa13.08□□□□□ -0.32
LIMS2-203ENST00000409254 CREB5Q02930 508 aa13.08□□□□□ -0.32
LIMS2-203ENST00000409254 PCSK7Q16549 785 aa13.08□□□□□ -0.32
LIMS2-203ENST00000409254 KIAA1161Q6NSJ0 714 aa13.08□□□□□ -0.32
LIMS2-203ENST00000409254 ZNF534Q76KX8 674 aa13.08□□□□□ -0.32
LIMS2-203ENST00000409254 PRUNE1Q86TP1 453 aa13.08□□□□□ -0.32
LIMS2-203ENST00000409254 C1orf210Q8IVY1 113 aa13.08□□□□□ -0.32
LIMS2-203ENST00000409254 CNPY4Q8N129 248 aa13.08□□□□□ -0.32
LIMS2-203ENST00000409254 AADATQ8N5Z0 425 aa13.08□□□□□ -0.32
LIMS2-203ENST00000409254 PAF1Q8N7H5 531 aa13.08□□□□□ -0.32
LIMS2-203ENST00000409254 DNAAF3Q8N9W5 541 aa13.08□□□□□ -0.32
LIMS2-203ENST00000409254 LPCAT1Q8NF37 534 aa13.08□□□□□ -0.32
LIMS2-203ENST00000409254 DTX3LQ8TDB6 740 aa13.08□□□□□ -0.32
LIMS2-203ENST00000409254 PDCD6IPQ8WUM4 868 aaKnown RBP13.08□□□□□ -0.32
LIMS2-203ENST00000409254 HMGB4Q8WW32 186 aa13.08□□□□□ -0.32
LIMS2-203ENST00000409254 ASB12Q8WXK4 309 aa13.08□□□□□ -0.32
LIMS2-203ENST00000409254 ARRDC3Q96B67 414 aa13.08□□□□□ -0.32
LIMS2-203ENST00000409254 RMDN1Q96DB5 314 aa13.08□□□□□ -0.32
LIMS2-203ENST00000409254 SPACA7Q96KW9 195 aa13.08□□□□□ -0.32
LIMS2-203ENST00000409254 FMO2Q99518 471 aa13.08□□□□□ -0.32
LIMS2-203ENST00000409254 OMDQ99983 421 aa13.08□□□□□ -0.32
LIMS2-203ENST00000409254 C1QTNF1Q9BXJ1 281 aa13.08□□□□□ -0.32
LIMS2-203ENST00000409254 ZDHHC18Q9NUE0 388 aa13.08□□□□□ -0.32
LIMS2-203ENST00000409254 FBXL12Q9NXK8 326 aa13.08□□□□□ -0.32
LIMS2-203ENST00000409254 BCCIPQ9P287 314 aaKnown RBP eCLIP13.08□□□□□ -0.32
LIMS2-203ENST00000409254 SNX24Q9Y343 169 aa13.08□□□□□ -0.32
LIMS2-203ENST00000409254 WDFY4Q6ZS81 3184 aa13.08□□□□□ -0.32
LIMS2-203ENST00000409254 VPS13AQ96RL7 3174 aa13.08□□□□□ -0.32
LIMS2-203ENST00000409254 HEATR9A2RTY3 570 aa13.07□□□□□ -0.32
LIMS2-203ENST00000409254 TTC4O95801 387 aa13.07□□□□□ -0.32
LIMS2-203ENST00000409254 TIMP2P16035 220 aa13.07□□□□□ -0.32
LIMS2-203ENST00000409254 ADRA1DP25100 572 aa13.07□□□□□ -0.32
LIMS2-203ENST00000409254 GKP32189 559 aa13.07□□□□□ -0.32
LIMS2-203ENST00000409254 HMGCLP35914 325 aa13.07□□□□□ -0.32
LIMS2-203ENST00000409254 TPMTP51580 245 aa13.07□□□□□ -0.32
LIMS2-203ENST00000409254 ADPRHP54922 357 aa13.07□□□□□ -0.32
LIMS2-203ENST00000409254 DCDC1P59894 354 aa13.07□□□□□ -0.32
LIMS2-203ENST00000409254 SLC7A5Q01650 507 aa13.07□□□□□ -0.32
LIMS2-203ENST00000409254 CNTN1Q12860 1018 aa13.07□□□□□ -0.32
LIMS2-203ENST00000409254 MSLNQ13421 630 aaPredicted RBP13.07□□□□□ -0.32
LIMS2-203ENST00000409254 TAF1AQ15573 450 aaPredicted RBP13.07□□□□□ -0.32
LIMS2-203ENST00000409254 TMEM52BQ4KMG9 183 aa13.07□□□□□ -0.32
LIMS2-203ENST00000409254 SPDYCQ5MJ68 293 aa13.07□□□□□ -0.32
LIMS2-203ENST00000409254 ANKRD22Q5VYY1 191 aa13.07□□□□□ -0.32
LIMS2-203ENST00000409254 KIAA1324Q6UXG2 1013 aaKnown RBP13.07□□□□□ -0.32
LIMS2-203ENST00000409254 SLC36A4Q6YBV0 504 aa13.07□□□□□ -0.32
LIMS2-203ENST00000409254 CENPUQ71F23 418 aa13.07□□□□□ -0.32
LIMS2-203ENST00000409254 ZNF765Q7L2R6 523 aa13.07□□□□□ -0.32
LIMS2-203ENST00000409254 CYP2U1Q7Z449 544 aa13.07□□□□□ -0.32
LIMS2-203ENST00000409254 TTC7BQ86TV6 843 aa13.07□□□□□ -0.32
LIMS2-203ENST00000409254 CAND1Q86VP6 1230 aaKnown RBP13.07□□□□□ -0.32
LIMS2-203ENST00000409254 WDR5BQ86VZ2 330 aa13.07□□□□□ -0.32
LIMS2-203ENST00000409254 TRIM69Q86WT6 500 aa13.07□□□□□ -0.32
LIMS2-203ENST00000409254 ZSWIM9Q86XI8 627 aa13.07□□□□□ -0.32
LIMS2-203ENST00000409254 HDDC3Q8N4P3 179 aa13.07□□□□□ -0.32
LIMS2-203ENST00000409254 DTWD2Q8NBA8 298 aa13.07□□□□□ -0.32
LIMS2-203ENST00000409254 LRRN4CLQ8ND94 238 aa13.07□□□□□ -0.32
LIMS2-203ENST00000409254 FBXO25Q8TCJ0 367 aa13.07□□□□□ -0.32
LIMS2-203ENST00000409254 NELL1Q92832 810 aa13.07□□□□□ -0.32
LIMS2-203ENST00000409254 PRRX2Q99811 253 aa13.07□□□□□ -0.32
LIMS2-203ENST00000409254 TRIM31Q9BZY9 425 aa13.07□□□□□ -0.32
LIMS2-203ENST00000409254 BTBD1Q9H0C5 482 aa13.07□□□□□ -0.32
LIMS2-203ENST00000409254 DPH5Q9H2P9 285 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms