RNA–Protein interactions for RNA: ENST00000409198.5

NEB-204, Transcript of nebulin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene NEB, Length 20,637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-204ENST00000409198 ZNF709Q8N972 641 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 COQ8AQ8NI60 647 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 TBC1D16Q8TBP0 767 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 AP3S1Q92572 193 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 TEFMQ96QE5 360 aaKnown RBP3.4□□□□□ -1.86
NEB-204ENST00000409198 GAL3ST4Q96RP7 486 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 SEZ6LQ9BYH1 1024 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 BARX2Q9UMQ3 279 aaPredicted RBP3.4□□□□□ -1.86
NEB-204ENST00000409198 HPSEQ9Y251 543 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 CRB1P82279 1406 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 NCK2O43639 380 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 PDE5AO76074 875 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 RENP00797 406 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 PPP2R2BQ00005 443 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 ZBTB6Q15916 424 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 INO80DQ53TQ3 878 aaPredicted RBP3.4□□□□□ -1.86
NEB-204ENST00000409198 GPAT2Q6NUI2 795 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 CYP2R1Q6VVX0 501 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 ZNF565Q8N9K5 539 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 PNLDC1Q8NA58 520 aaKnown RBP3.4□□□□□ -1.86
NEB-204ENST00000409198 TMEM161BQ8NDZ6 487 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 DEFB118Q96PH6 123 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 SCGB3A2Q96PL1 93 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 NDC1Q9BTX1 674 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 TMEM168Q9H0V1 697 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 SETD4Q9NVD3 440 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 ERVK-18Q9QC07 812 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 B8ZZF3 427 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 ADAMTS3O15072 1205 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 ACADSP16219 412 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 MC1RQ01726 317 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 PTK7Q13308 1070 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 SP140Q13342 867 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 HJURPQ8NCD3 748 aaPredicted RBP3.4□□□□□ -1.86
NEB-204ENST00000409198 TOR1AIP2Q8NFQ8 470 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 MTFMTQ96DP5 389 aaKnown RBP3.4□□□□□ -1.86
NEB-204ENST00000409198 ABHD16BQ9H3Z7 469 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 ZSWIM5Q9P217 1185 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 LRFN1Q9P244 771 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 SUSD2Q9UGT4 822 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 CLIC4Q9Y696 253 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 IQSEC2Q5JU85 1478 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 OR5F1O95221 314 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 EPHX1P07099 455 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 ELFN1P0C7U0 828 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 ATP6V1B2P21281 511 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 BUD31P41223 144 aaPredicted RBP3.4□□□□□ -1.86
NEB-204ENST00000409198 CRATP43155 626 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 TSPAN5P62079 268 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 OCLNQ16625 522 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 COLGALT1Q8NBJ5 622 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 FBXO15Q8NCQ5 510 aaPredicted RBP3.4□□□□□ -1.86
NEB-204ENST00000409198 TEKT5Q96M29 485 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 MCEEQ96PE7 176 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 EPB41L1Q9H4G0 881 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 VCPKMTQ9H867 229 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 REEP1Q9H902 201 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 NMRAL1Q9HBL8 299 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 ING4Q9UNL4 249 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 RNASEH2AO75792 299 aaKnown RBP3.4□□□□□ -1.86
NEB-204ENST00000409198 CRYBA1P05813 215 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 CNTFP26441 200 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 LBX1P52954 281 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 BLMHQ13867 455 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 OTOP3Q7RTS5 596 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 ZNF572Q7Z3I7 529 aaPredicted RBP3.4□□□□□ -1.86
NEB-204ENST00000409198 HGH1Q9BTY7 390 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 FNDC11Q9BVV2 318 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 GSDMCQ9BYG8 508 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 GPR88Q9GZN0 384 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 C17orf75Q9HAS0 396 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 SPTLC3Q9NUV7 552 aa3.4□□□□□ -1.86
NEB-204ENST00000409198 CRNNQ9UBG3 495 aaPredicted RBP3.4□□□□□ -1.86
NEB-204ENST00000409198 SDR42E2A6NKP2 422 aa3.4□□□□□ -1.87
NEB-204ENST00000409198 H3BRB1 525 aa3.4□□□□□ -1.87
NEB-204ENST00000409198 NR5A2O00482 541 aa3.4□□□□□ -1.87
NEB-204ENST00000409198 VTNP04004 478 aa3.4□□□□□ -1.87
NEB-204ENST00000409198 SRCP12931 536 aa3.4□□□□□ -1.87
NEB-204ENST00000409198 PGAM2P15259 253 aa3.4□□□□□ -1.87
NEB-204ENST00000409198 OR3A3P47888 321 aa3.4□□□□□ -1.87
NEB-204ENST00000409198 OR3A2P47893 321 aa3.4□□□□□ -1.87
NEB-204ENST00000409198 ACLYP53396 1101 aa3.4□□□□□ -1.87
NEB-204ENST00000409198 RHBDL3P58872 404 aa3.4□□□□□ -1.87
NEB-204ENST00000409198 SLC39A12Q504Y0 691 aa3.4□□□□□ -1.87
NEB-204ENST00000409198 FAM180BQ6P0A1 224 aa3.4□□□□□ -1.87
NEB-204ENST00000409198 RFX8Q6ZV50 586 aa3.4□□□□□ -1.87
NEB-204ENST00000409198 PTCHD4Q6ZW05 846 aa3.4□□□□□ -1.87
NEB-204ENST00000409198 C12orf56Q8IXR9 622 aa3.4□□□□□ -1.87
NEB-204ENST00000409198 ZNF567Q8N184 647 aa3.4□□□□□ -1.87
NEB-204ENST00000409198 POC5Q8NA72 575 aa3.4□□□□□ -1.87
NEB-204ENST00000409198 C16orf58Q96GQ5 468 aa3.4□□□□□ -1.87
NEB-204ENST00000409198 LMLNQ96KR4 655 aa3.4□□□□□ -1.87
NEB-204ENST00000409198 TGS1Q96RS0 853 aaKnown RBP3.4□□□□□ -1.87
NEB-204ENST00000409198 TUT1Q9H6E5 874 aaKnown RBP3.4□□□□□ -1.87
NEB-204ENST00000409198 KAT7O95251 611 aa3.4□□□□□ -1.87
NEB-204ENST00000409198 TCN1P20061 433 aaPredicted RBP3.4□□□□□ -1.87
NEB-204ENST00000409198 TNFSF4P23510 183 aa3.4□□□□□ -1.87
NEB-204ENST00000409198 HSD11B1P28845 292 aa3.4□□□□□ -1.87
NEB-204ENST00000409198 EXOSC6Q5RKV6 272 aaKnown RBP3.4□□□□□ -1.87
NEB-204ENST00000409198 CATSPEREQ5SY80 951 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms